RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 FLT4P35916 1363 aa17.43■□□□□ 0.38
HDAC8-217ENST00000478743 ITGBL1O95965 494 aaPredicted RBP17.43■□□□□ 0.38
HDAC8-217ENST00000478743 PHKG2P15735 406 aa17.43■□□□□ 0.38
HDAC8-217ENST00000478743 TM4SF1P30408 202 aa17.43■□□□□ 0.38
HDAC8-217ENST00000478743 GGNBP2Q9H3C7 697 aa17.43■□□□□ 0.38
HDAC8-217ENST00000478743 TSKSQ9UJT2 592 aa17.43■□□□□ 0.38
HDAC8-217ENST00000478743 SCN4AP35499 1836 aa17.42■□□□□ 0.38
HDAC8-217ENST00000478743 ANKRD26Q9UPS8 1709 aa17.42■□□□□ 0.38
HDAC8-217ENST00000478743 RASSF10A6NK89 507 aa17.41■□□□□ 0.38
HDAC8-217ENST00000478743 ERFEQ4G0M1 354 aa17.41■□□□□ 0.38
HDAC8-217ENST00000478743 DPY19L2Q6NUT2 758 aa17.41■□□□□ 0.38
HDAC8-217ENST00000478743 WDR33Q9C0J8 1336 aaKnown RBP17.41■□□□□ 0.38
HDAC8-217ENST00000478743 CRKLP46109 303 aaKnown RBP17.4■□□□□ 0.38
HDAC8-217ENST00000478743 TTLL6Q8N841 843 aa17.4■□□□□ 0.38
HDAC8-217ENST00000478743 ZNF219Q9P2Y4 722 aaPredicted RBP17.4■□□□□ 0.38
HDAC8-217ENST00000478743 SPG7Q9UQ90 795 aa17.4■□□□□ 0.38
HDAC8-217ENST00000478743 LDHDQ86WU2 507 aa17.39■□□□□ 0.37
HDAC8-217ENST00000478743 MCOLN1Q9GZU1 580 aa17.39■□□□□ 0.37
HDAC8-217ENST00000478743 EMILIN1Q9Y6C2 1016 aa17.39■□□□□ 0.37
HDAC8-217ENST00000478743 CASP8AP2Q9UKL3 1982 aa17.39■□□□□ 0.37
HDAC8-217ENST00000478743 FYB1O15117 783 aa17.38■□□□□ 0.37
HDAC8-217ENST00000478743 DEFB115Q30KQ5 88 aa17.38■□□□□ 0.37
HDAC8-217ENST00000478743 USPL1Q5W0Q7 1092 aa17.38■□□□□ 0.37
HDAC8-217ENST00000478743 TAF1DQ9H5J8 278 aaPredicted RBP17.38■□□□□ 0.37
HDAC8-217ENST00000478743 C2CD5Q86YS7 1000 aa17.37■□□□□ 0.37
HDAC8-217ENST00000478743 TONSLQ96HA7 1378 aa17.37■□□□□ 0.37
HDAC8-217ENST00000478743 MAP2K1Q02750 393 aaPredicted RBP17.36■□□□□ 0.37
HDAC8-217ENST00000478743 NFIXQ14938 502 aa17.36■□□□□ 0.37
HDAC8-217ENST00000478743 IFNL2Q8IZJ0 200 aa17.36■□□□□ 0.37
HDAC8-217ENST00000478743 SLX4Q8IY92 1834 aa17.35■□□□□ 0.37
HDAC8-217ENST00000478743 C21orf2O43822 256 aa17.35■□□□□ 0.37
HDAC8-217ENST00000478743 FMR1Q06787 632 aaKnown RBP eCLIP17.35■□□□□ 0.37
HDAC8-217ENST00000478743 PTCD1O75127 700 aaKnown RBP17.34■□□□□ 0.37
HDAC8-217ENST00000478743 EAPPQ56P03 285 aaPredicted RBP17.34■□□□□ 0.37
HDAC8-217ENST00000478743 INTS5Q6P9B9 1019 aaKnown RBP17.34■□□□□ 0.37
HDAC8-217ENST00000478743 EYA1Q99502 592 aa17.34■□□□□ 0.37
HDAC8-217ENST00000478743 ARFGEF2Q9Y6D5 1785 aa17.33■□□□□ 0.37
HDAC8-217ENST00000478743 MAP1SQ66K74 1059 aaPredicted RBP17.33■□□□□ 0.36
HDAC8-217ENST00000478743 BCL2L12Q9HB09 334 aa17.33■□□□□ 0.36
HDAC8-217ENST00000478743 KIF24Q5T7B8 1368 aa17.32■□□□□ 0.36
HDAC8-217ENST00000478743 ZNF541Q9H0D2 1346 aa17.32■□□□□ 0.36
HDAC8-217ENST00000478743 L3MBTL3Q96JM7 780 aaPredicted RBP17.32■□□□□ 0.36
HDAC8-217ENST00000478743 ABT1Q9ULW3 272 aaKnown RBP17.32■□□□□ 0.36
HDAC8-217ENST00000478743 SERPINB2P05120 415 aa17.31■□□□□ 0.36
HDAC8-217ENST00000478743 GRM1Q13255 1194 aa17.31■□□□□ 0.36
HDAC8-217ENST00000478743 CYP4F22Q6NT55 531 aa17.31■□□□□ 0.36
HDAC8-217ENST00000478743 SIN3AQ96ST3 1273 aa17.31■□□□□ 0.36
HDAC8-217ENST00000478743 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.31■□□□□ 0.361e-6■■□□□ 14.2
HDAC8-217ENST00000478743 SOS1Q07889 1333 aaPredicted RBP17.3■□□□□ 0.36
HDAC8-217ENST00000478743 SOX10P56693 466 aa17.3■□□□□ 0.36
HDAC8-217ENST00000478743 CAPNS2Q96L46 248 aa17.3■□□□□ 0.36
HDAC8-217ENST00000478743 LTBP3Q9NS15 1303 aa17.29■□□□□ 0.36
HDAC8-217ENST00000478743 AOC2O75106 756 aa17.29■□□□□ 0.36
HDAC8-217ENST00000478743 CCDC24Q8N4L8 307 aa17.29■□□□□ 0.36
HDAC8-217ENST00000478743 TAOK3Q9H2K8 898 aa17.29■□□□□ 0.36
HDAC8-217ENST00000478743 CLEC11AQ9Y240 323 aa17.29■□□□□ 0.36
HDAC8-217ENST00000478743 IQCA1LA6NCM1 817 aa17.28■□□□□ 0.36
HDAC8-217ENST00000478743 ERVV-2B6SEH9 535 aa17.28■□□□□ 0.36
HDAC8-217ENST00000478743 H0YIN7 160 aa17.28■□□□□ 0.36
HDAC8-217ENST00000478743 ZNF622Q969S3 477 aaKnown RBP eCLIP17.28■□□□□ 0.36
HDAC8-217ENST00000478743 PUS7Q96PZ0 661 aaKnown RBP17.28■□□□□ 0.36
HDAC8-217ENST00000478743 CARD11Q9BXL7 1154 aa17.28■□□□□ 0.36
HDAC8-217ENST00000478743 TRPM7Q96QT4 1865 aa17.28■□□□□ 0.36
HDAC8-217ENST00000478743 ZPR1O75312 459 aa17.27■□□□□ 0.36
HDAC8-217ENST00000478743 DGKZQ13574 1117 aa17.27■□□□□ 0.36
HDAC8-217ENST00000478743 PAXIP1Q6ZW49 1069 aaPredicted RBP17.27■□□□□ 0.36
HDAC8-217ENST00000478743 CNTROBQ8N137 903 aa17.27■□□□□ 0.36
HDAC8-217ENST00000478743 COL15A1P39059 1388 aa17.27■□□□□ 0.35
HDAC8-217ENST00000478743 PPM1GO15355 546 aaPredicted RBP17.26■□□□□ 0.35
HDAC8-217ENST00000478743 PRPF38BQ5VTL8 546 aaKnown RBP17.26■□□□□ 0.35
HDAC8-217ENST00000478743 DNAJC10Q8IXB1 793 aa17.26■□□□□ 0.35
HDAC8-217ENST00000478743 TESK2Q96S53 571 aa17.26■□□□□ 0.35
HDAC8-217ENST00000478743 SCN7AQ01118 1682 aa17.26■□□□□ 0.35
HDAC8-217ENST00000478743 RNF123Q5XPI4 1314 aa17.25■□□□□ 0.35
HDAC8-217ENST00000478743 EPHX2P34913 555 aa17.25■□□□□ 0.35
HDAC8-217ENST00000478743 GPR101Q96P66 508 aaPredicted RBP17.25■□□□□ 0.35
HDAC8-217ENST00000478743 DDX21Q9NR30 783 aaKnown RBP eCLIP17.24■□□□□ 0.35
HDAC8-217ENST00000478743 SCN11AQ9UI33 1791 aa17.24■□□□□ 0.35
HDAC8-217ENST00000478743 CABP4P57796 275 aa17.23■□□□□ 0.35
HDAC8-217ENST00000478743 BICDL1Q6ZP65 573 aa17.23■□□□□ 0.35
HDAC8-217ENST00000478743 BEGAINQ9BUH8 593 aa17.23■□□□□ 0.35
HDAC8-217ENST00000478743 NARFQ9UHQ1 456 aa17.23■□□□□ 0.35
HDAC8-217ENST00000478743 HACL1Q9UJ83 578 aa17.23■□□□□ 0.35
HDAC8-217ENST00000478743 ZBTB1Q9Y2K1 713 aa17.22■□□□□ 0.35
HDAC8-217ENST00000478743 WASHC2AQ641Q2 1341 aa17.21■□□□□ 0.34
HDAC8-217ENST00000478743 BCORQ6W2J9 1755 aa17.2■□□□□ 0.34
HDAC8-217ENST00000478743 COL4A5P29400 1685 aa17.2■□□□□ 0.34
HDAC8-217ENST00000478743 TRAF5O00463 557 aa17.2■□□□□ 0.34
HDAC8-217ENST00000478743 NEUROD1Q13562 356 aa17.2■□□□□ 0.34
HDAC8-217ENST00000478743 CST9Q5W186 159 aa17.2■□□□□ 0.34
HDAC8-217ENST00000478743 PRPF40BQ6NWY9 871 aaKnown RBP17.2■□□□□ 0.34
HDAC8-217ENST00000478743 NFATC2IPQ8NCF5 419 aa17.2■□□□□ 0.34
HDAC8-217ENST00000478743 CYP19A1P11511 503 aaPredicted RBP17.19■□□□□ 0.34
HDAC8-217ENST00000478743 EIF4A2Q14240 407 aaKnown RBP17.19■□□□□ 0.34
HDAC8-217ENST00000478743 PRR5LQ6MZQ0 368 aa17.19■□□□□ 0.34
HDAC8-217ENST00000478743 ZNF530Q6P9A1 599 aaPredicted RBP17.19■□□□□ 0.34
HDAC8-217ENST00000478743 OLFM4Q6UX06 510 aa17.19■□□□□ 0.34
HDAC8-217ENST00000478743 ECE1P42892 770 aa17.18■□□□□ 0.34
HDAC8-217ENST00000478743 TBC1D9BQ66K14 1250 aa17.18■□□□□ 0.34
HDAC8-217ENST00000478743 ZNF277Q9NRM2 450 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms