RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 XP32Q5T750 250 aa10.46□□□□□ -0.73
ITGA4-209ENST00000478440 ZNF594Q96JF6 807 aaPredicted RBP10.46□□□□□ -0.73
ITGA4-209ENST00000478440 ZDHHC3Q9NYG2 299 aa10.46□□□□□ -0.73
ITGA4-209ENST00000478440 EIF4G1Q04637 1599 aaKnown RBP10.46□□□□□ -0.74
ITGA4-209ENST00000478440 DCAF1Q9Y4B6 1507 aa10.45□□□□□ -0.74
ITGA4-209ENST00000478440 SEC13P55735 322 aa10.45□□□□□ -0.74
ITGA4-209ENST00000478440 AIDAQ96BJ3 306 aa10.45□□□□□ -0.74
ITGA4-209ENST00000478440 CNTNAP3BQ96NU0 1288 aa10.45□□□□□ -0.74
ITGA4-209ENST00000478440 CNTNAP3Q9BZ76 1288 aa10.45□□□□□ -0.74
ITGA4-209ENST00000478440 CRISPLD1Q9H336 500 aa10.45□□□□□ -0.74
ITGA4-209ENST00000478440 NSFL1CQ9UNZ2 370 aaKnown RBP10.45□□□□□ -0.74
ITGA4-209ENST00000478440 KIAA1024Q9UPX6 916 aa10.45□□□□□ -0.74
ITGA4-209ENST00000478440 GSK3AP49840 483 aa10.44□□□□□ -0.74
ITGA4-209ENST00000478440 KANK4Q5T7N3 995 aaPredicted RBP10.44□□□□□ -0.74
ITGA4-209ENST00000478440 FIGNL1Q6PIW4 674 aa10.44□□□□□ -0.74
ITGA4-209ENST00000478440 GTPBP3Q969Y2 492 aaKnown RBP10.44□□□□□ -0.74
ITGA4-209ENST00000478440 KRTAP4-8Q9BYQ9 185 aa10.44□□□□□ -0.74
ITGA4-209ENST00000478440 EPHA4P54764 986 aa10.43□□□□□ -0.74
ITGA4-209ENST00000478440 FOXK2Q01167 660 aa10.43□□□□□ -0.74
ITGA4-209ENST00000478440 TEAD4Q15561 434 aa10.43□□□□□ -0.74
ITGA4-209ENST00000478440 SLC9A9Q8IVB4 645 aa10.43□□□□□ -0.74
ITGA4-209ENST00000478440 CFHR5Q9BXR6 569 aa10.43□□□□□ -0.74
ITGA4-209ENST00000478440 CFAP70Q5T0N1 1121 aa10.42□□□□□ -0.74
ITGA4-209ENST00000478440 NLRP8Q86W28 1048 aa10.42□□□□□ -0.74
ITGA4-209ENST00000478440 TNS4Q8IZW8 715 aa10.42□□□□□ -0.74
ITGA4-209ENST00000478440 GAS2L2Q8NHY3 880 aa10.42□□□□□ -0.74
ITGA4-209ENST00000478440 CCDC97Q96F63 343 aaPredicted RBP10.42□□□□□ -0.74
ITGA4-209ENST00000478440 RUBCNLQ9H714 662 aa10.42□□□□□ -0.74
ITGA4-209ENST00000478440 MBIPQ9NS73 344 aa10.42□□□□□ -0.74
ITGA4-209ENST00000478440 GPC6Q9Y625 555 aaPredicted RBP10.42□□□□□ -0.74
ITGA4-209ENST00000478440 USP17L15C9J2P7 530 aa10.41□□□□□ -0.74
ITGA4-209ENST00000478440 USP17L10C9JJH3 530 aa10.41□□□□□ -0.74
ITGA4-209ENST00000478440 USP17L13C9JLJ4 530 aa10.41□□□□□ -0.74
ITGA4-209ENST00000478440 USP17L12C9JPN9 530 aa10.41□□□□□ -0.74
ITGA4-209ENST00000478440 USP17L11C9JVI0 530 aa10.41□□□□□ -0.74
ITGA4-209ENST00000478440 USP17L21D6R901 530 aa10.41□□□□□ -0.74
ITGA4-209ENST00000478440 USP17L18D6R9N7 530 aa10.41□□□□□ -0.74
ITGA4-209ENST00000478440 USP17L22D6RA61 530 aa10.41□□□□□ -0.74
ITGA4-209ENST00000478440 USP17L17D6RBQ6 530 aa10.41□□□□□ -0.74
ITGA4-209ENST00000478440 USP17L19D6RCP7 530 aa10.41□□□□□ -0.74
ITGA4-209ENST00000478440 USP17L20D6RJB6 530 aa10.41□□□□□ -0.74
ITGA4-209ENST00000478440 PSMA6P60900 246 aaKnown RBP10.41□□□□□ -0.74
ITGA4-209ENST00000478440 KRT76Q01546 638 aa10.41□□□□□ -0.74
ITGA4-209ENST00000478440 SRSF11Q05519 484 aaKnown RBP10.41□□□□□ -0.74
ITGA4-209ENST00000478440 USP17L24Q0WX57 530 aa10.41□□□□□ -0.74
ITGA4-209ENST00000478440 PTK7Q13308 1070 aa10.41□□□□□ -0.74
ITGA4-209ENST00000478440 ZNF295-AS1Q8N0V1 137 aa10.41□□□□□ -0.74
ITGA4-209ENST00000478440 SERPINA10Q9UK55 444 aa10.41□□□□□ -0.74
ITGA4-209ENST00000478440 ZNF232Q9UNY5 417 aa10.41□□□□□ -0.74
ITGA4-209ENST00000478440 SERTM1A2A2V5 107 aa10.4□□□□□ -0.74
ITGA4-209ENST00000478440 NOS2P35228 1153 aa10.4□□□□□ -0.74
ITGA4-209ENST00000478440 ARSJQ5FYB0 599 aaPredicted RBP10.4□□□□□ -0.74
ITGA4-209ENST00000478440 C14orf37Q86TY3 774 aa10.4□□□□□ -0.74
ITGA4-209ENST00000478440 ANKMY2Q8IV38 441 aa10.4□□□□□ -0.74
ITGA4-209ENST00000478440 L3MBTL2Q969R5 705 aa10.4□□□□□ -0.74
ITGA4-209ENST00000478440 SFI1A8K8P3 1242 aa10.39□□□□□ -0.75
ITGA4-209ENST00000478440 SLURP2P0DP57 97 aa10.39□□□□□ -0.75
ITGA4-209ENST00000478440 ATP4AP20648 1035 aa10.39□□□□□ -0.75
ITGA4-209ENST00000478440 RFX1P22670 979 aa10.39□□□□□ -0.75
ITGA4-209ENST00000478440 DPYDQ12882 1025 aa10.39□□□□□ -0.75
ITGA4-209ENST00000478440 CRTC2Q53ET0 693 aaPredicted RBP10.39□□□□□ -0.75
ITGA4-209ENST00000478440 RNFT1Q5M7Z0 435 aa10.39□□□□□ -0.75
ITGA4-209ENST00000478440 ATXN7L1Q9ULK2 861 aaPredicted RBP10.39□□□□□ -0.75
ITGA4-209ENST00000478440 GJA3Q9Y6H8 435 aa10.39□□□□□ -0.75
ITGA4-209ENST00000478440 GPR25O00155 361 aa10.38□□□□□ -0.75
ITGA4-209ENST00000478440 DKK1O94907 266 aa10.38□□□□□ -0.75
ITGA4-209ENST00000478440 MX2P20592 715 aa10.38□□□□□ -0.75
ITGA4-209ENST00000478440 BICDL1Q6ZP65 573 aa10.38□□□□□ -0.75
ITGA4-209ENST00000478440 TSEN2Q8NCE0 465 aaKnown RBP10.38□□□□□ -0.75
ITGA4-209ENST00000478440 USP3Q9Y6I4 520 aa10.38□□□□□ -0.75
ITGA4-209ENST00000478440 HIRAP54198 1017 aaPredicted RBP10.37□□□□□ -0.75
ITGA4-209ENST00000478440 GAS6Q14393 721 aa10.37□□□□□ -0.75
ITGA4-209ENST00000478440 STAG2Q8N3U4 1231 aa10.37□□□□□ -0.75
ITGA4-209ENST00000478440 TMEM151AQ8N4L1 468 aa10.37□□□□□ -0.75
ITGA4-209ENST00000478440 HINFPQ9BQA5 517 aa10.37□□□□□ -0.75
ITGA4-209ENST00000478440 NEUROD4Q9HD90 331 aa10.37□□□□□ -0.75
ITGA4-209ENST00000478440 A0A1W2PNR3 127 aa10.36□□□□□ -0.75
ITGA4-209ENST00000478440 PPP1R12BO60237 982 aaPredicted RBP10.36□□□□□ -0.75
ITGA4-209ENST00000478440 ADAMTS2O95450 1211 aa10.36□□□□□ -0.75
ITGA4-209ENST00000478440 MAP2K3P46734 347 aa10.36□□□□□ -0.75
ITGA4-209ENST00000478440 FAM200AQ8TCP9 573 aa10.36□□□□□ -0.75
ITGA4-209ENST00000478440 TSPAN10Q9H1Z9 355 aaPredicted RBP10.36□□□□□ -0.75
ITGA4-209ENST00000478440 PCDHGC4Q9Y5F7 938 aa10.36□□□□□ -0.75
ITGA4-209ENST00000478440 C1orf53Q5VUE5 145 aa10.35□□□□□ -0.75
ITGA4-209ENST00000478440 ZDHHC1Q8WTX9 485 aa10.35□□□□□ -0.75
ITGA4-209ENST00000478440 PARP3Q9Y6F1 533 aa10.35□□□□□ -0.75
ITGA4-209ENST00000478440 MAP3K10Q02779 954 aa10.34□□□□□ -0.75
ITGA4-209ENST00000478440 HIF1AQ16665 826 aa10.34□□□□□ -0.75
ITGA4-209ENST00000478440 TBCELQ5QJ74 424 aa10.34□□□□□ -0.75
ITGA4-209ENST00000478440 ZIC5Q96T25 663 aa10.34□□□□□ -0.75
ITGA4-209ENST00000478440 ATAD2Q6PL18 1390 aa10.34□□□□□ -0.75
ITGA4-209ENST00000478440 EML1O00423 815 aa10.33□□□□□ -0.76
ITGA4-209ENST00000478440 ATXN7O15265 892 aaPredicted RBP10.33□□□□□ -0.76
ITGA4-209ENST00000478440 THBS1P07996 1170 aa10.33□□□□□ -0.76
ITGA4-209ENST00000478440 ELOAQ14241 798 aaKnown RBP10.33□□□□□ -0.76
ITGA4-209ENST00000478440 SAMD5Q5TGI4 173 aa10.33□□□□□ -0.76
ITGA4-209ENST00000478440 POTEAQ6S8J7 498 aa10.33□□□□□ -0.76
ITGA4-209ENST00000478440 SVOPQ8N4V2 548 aa10.33□□□□□ -0.76
ITGA4-209ENST00000478440 ZCCHC2Q9C0B9 1178 aaKnown RBP10.33□□□□□ -0.76
ITGA4-209ENST00000478440 ENAMQ9NRM1 1142 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms