RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 PCDH11XQ9BZA7 1347 aa15.41■□□□□ 0.06
TRAF3IP3-213ENST00000478359 PCDH11YQ9BZA8 1340 aa15.41■□□□□ 0.06
TRAF3IP3-213ENST00000478359 HSP90AB4PQ58FF6 505 aa15.41■□□□□ 0.06
TRAF3IP3-213ENST00000478359 ADCY9O60503 1353 aa15.4■□□□□ 0.06
TRAF3IP3-213ENST00000478359 NBR1Q14596 966 aa15.4■□□□□ 0.06
TRAF3IP3-213ENST00000478359 COL5A2P05997 1499 aaPredicted RBP15.4■□□□□ 0.06
TRAF3IP3-213ENST00000478359 GSPT1P15170 499 aaKnown RBP15.4■□□□□ 0.06
TRAF3IP3-213ENST00000478359 SLC4A3P48751 1232 aa15.4■□□□□ 0.06
TRAF3IP3-213ENST00000478359 TOM1L2Q6ZVM7 507 aa15.39■□□□□ 0.05
TRAF3IP3-213ENST00000478359 NFATC2IPQ8NCF5 419 aa15.39■□□□□ 0.05
TRAF3IP3-213ENST00000478359 AOX1Q06278 1338 aa15.38■□□□□ 0.05
TRAF3IP3-213ENST00000478359 PNMA6EA0A0J9YXQ4 647 aa15.38■□□□□ 0.05
TRAF3IP3-213ENST00000478359 CYP27B1O15528 508 aa15.38■□□□□ 0.05
TRAF3IP3-213ENST00000478359 SNRPA1P09661 255 aaKnown RBP15.38■□□□□ 0.05
TRAF3IP3-213ENST00000478359 POLA2Q14181 598 aa15.38■□□□□ 0.05
TRAF3IP3-213ENST00000478359 FMNL2Q96PY5 1086 aa15.38■□□□□ 0.05
TRAF3IP3-213ENST00000478359 CARD10Q9BWT7 1032 aa15.38■□□□□ 0.05
TRAF3IP3-213ENST00000478359 CABP4P57796 275 aa15.37■□□□□ 0.05
TRAF3IP3-213ENST00000478359 MTX1Q13505 466 aa15.37■□□□□ 0.05
TRAF3IP3-213ENST00000478359 LINS1Q8NG48 757 aa15.37■□□□□ 0.05
TRAF3IP3-213ENST00000478359 SNX21Q969T3 373 aa15.37■□□□□ 0.05
TRAF3IP3-213ENST00000478359 TBC1D2Q9BYX2 928 aa15.37■□□□□ 0.05
TRAF3IP3-213ENST00000478359 MAP3K2Q9Y2U5 619 aa15.37■□□□□ 0.05
TRAF3IP3-213ENST00000478359 PDE1AP54750 535 aa15.37■□□□□ 0.05
TRAF3IP3-213ENST00000478359 HSCBQ8IWL3 235 aa15.37■□□□□ 0.05
TRAF3IP3-213ENST00000478359 C16orf71Q8IYS4 520 aaPredicted RBP15.37■□□□□ 0.05
TRAF3IP3-213ENST00000478359 ZCRB1Q8TBF4 217 aaKnown RBP15.37■□□□□ 0.05
TRAF3IP3-213ENST00000478359 EXOC6BQ9Y2D4 811 aa15.37■□□□□ 0.05
TRAF3IP3-213ENST00000478359 ERBB4Q15303 1308 aa15.36■□□□□ 0.05
TRAF3IP3-213ENST00000478359 C5P01031 1676 aa15.36■□□□□ 0.05
TRAF3IP3-213ENST00000478359 LAMB4A4D0S4 1761 aa15.36■□□□□ 0.05
TRAF3IP3-213ENST00000478359 ERVV-2B6SEH9 535 aa15.36■□□□□ 0.05
TRAF3IP3-213ENST00000478359 LARP1Q6PKG0 1096 aaKnown RBP15.36■□□□□ 0.05
TRAF3IP3-213ENST00000478359 C9orf78Q9NZ63 289 aaPredicted RBP15.36■□□□□ 0.05
TRAF3IP3-213ENST00000478359 SALL3Q9BXA9 1300 aa15.36■□□□□ 0.05
TRAF3IP3-213ENST00000478359 APBB1O00213 710 aa15.35■□□□□ 0.05
TRAF3IP3-213ENST00000478359 SMARCA5O60264 1052 aaPredicted RBP15.35■□□□□ 0.05
TRAF3IP3-213ENST00000478359 IL2RBP14784 551 aa15.35■□□□□ 0.05
TRAF3IP3-213ENST00000478359 MX1P20591 662 aa15.35■□□□□ 0.05
TRAF3IP3-213ENST00000478359 NEXNQ0ZGT2 675 aa15.35■□□□□ 0.05
TRAF3IP3-213ENST00000478359 PPP1R42Q7Z4L9 355 aa15.35■□□□□ 0.05
TRAF3IP3-213ENST00000478359 STAP2Q9UGK3 403 aa15.35■□□□□ 0.05
TRAF3IP3-213ENST00000478359 UTYO14607 1347 aa15.35■□□□□ 0.05
TRAF3IP3-213ENST00000478359 REC8O95072 547 aa15.35■□□□□ 0.05
TRAF3IP3-213ENST00000478359 NBPF7P0C2Y1 421 aaPredicted RBP15.35■□□□□ 0.05
TRAF3IP3-213ENST00000478359 SDSP20132 328 aa15.35■□□□□ 0.05
TRAF3IP3-213ENST00000478359 NKX1-1Q15270 411 aaPredicted RBP15.35■□□□□ 0.05
TRAF3IP3-213ENST00000478359 KIF1BPQ96EK5 621 aa15.35■□□□□ 0.05
TRAF3IP3-213ENST00000478359 SRGAP3O43295 1099 aa15.34■□□□□ 0.05
TRAF3IP3-213ENST00000478359 PDIA6Q15084 440 aa15.34■□□□□ 0.05
TRAF3IP3-213ENST00000478359 ANXA1P04083 346 aa15.33■□□□□ 0.05
TRAF3IP3-213ENST00000478359 SLC39A6Q13433 755 aa15.33■□□□□ 0.05
TRAF3IP3-213ENST00000478359 ZNF496Q96IT1 587 aaPredicted RBP15.33■□□□□ 0.05
TRAF3IP3-213ENST00000478359 SURF6O75683 361 aaKnown RBP15.33■□□□□ 0.04
TRAF3IP3-213ENST00000478359 EVA1CP58658 441 aa15.33■□□□□ 0.04
TRAF3IP3-213ENST00000478359 PROSER3Q2NL68 480 aa15.33■□□□□ 0.04
TRAF3IP3-213ENST00000478359 RIC3Q7Z5B4 369 aa15.33■□□□□ 0.04
TRAF3IP3-213ENST00000478359 ERC1Q8IUD2 1116 aa15.33■□□□□ 0.04
TRAF3IP3-213ENST00000478359 OTUD7AQ8TE49 926 aaPredicted RBP15.33■□□□□ 0.04
TRAF3IP3-213ENST00000478359 GRM8O00222 908 aa15.32■□□□□ 0.04
TRAF3IP3-213ENST00000478359 TUBGCP6Q96RT7 1819 aa15.32■□□□□ 0.04
TRAF3IP3-213ENST00000478359 PRAMEF22A3QJZ6 481 aa15.31■□□□□ 0.04
TRAF3IP3-213ENST00000478359 NFKBIBQ15653 356 aa15.31■□□□□ 0.04
TRAF3IP3-213ENST00000478359 IL27Q8NEV9 243 aa15.31■□□□□ 0.04
TRAF3IP3-213ENST00000478359 UBR2Q8IWV8 1755 aa15.31■□□□□ 0.04
TRAF3IP3-213ENST00000478359 EPB41L2O43491 1005 aaKnown RBP15.31■□□□□ 0.04
TRAF3IP3-213ENST00000478359 RHPN1Q8TCX5 695 aa15.31■□□□□ 0.04
TRAF3IP3-213ENST00000478359 PAPPAQ13219 1627 aa15.3■□□□□ 0.04
TRAF3IP3-213ENST00000478359 ERC2O15083 957 aa15.3■□□□□ 0.04
TRAF3IP3-213ENST00000478359 ANKRD13DQ6ZTN6 518 aa15.3■□□□□ 0.04
TRAF3IP3-213ENST00000478359 METTL22Q9BUU2 404 aaPredicted RBP15.3■□□□□ 0.04
TRAF3IP3-213ENST00000478359 ANTXR1Q9H6X2 564 aa15.3■□□□□ 0.04
TRAF3IP3-213ENST00000478359 COL14A1Q05707 1796 aaKnown RBP15.3■□□□□ 0.04
TRAF3IP3-213ENST00000478359 AHDC1Q5TGY3 1603 aaPredicted RBP15.3■□□□□ 0.04
TRAF3IP3-213ENST00000478359 RABEP1Q15276 862 aa15.29■□□□□ 0.04
TRAF3IP3-213ENST00000478359 USP26Q9BXU7 913 aa15.29■□□□□ 0.04
TRAF3IP3-213ENST00000478359 COL22A1Q8NFW1 1626 aaPredicted RBP15.29■□□□□ 0.04
TRAF3IP3-213ENST00000478359 AIMP1Q12904 312 aaKnown RBP15.29■□□□□ 0.04
TRAF3IP3-213ENST00000478359 COPS6Q7L5N1 327 aa15.29■□□□□ 0.04
TRAF3IP3-213ENST00000478359 TTC41PQ6P2S7 1318 aa15.29■□□□□ 0.04
TRAF3IP3-213ENST00000478359 COL15A1P39059 1388 aa15.28■□□□□ 0.04
TRAF3IP3-213ENST00000478359 SHANK3Q9BYB0 1731 aa15.28■□□□□ 0.04
TRAF3IP3-213ENST00000478359 XAGE3Q8WTP9 111 aa15.28■□□□□ 0.04
TRAF3IP3-213ENST00000478359 KIF2CQ99661 725 aa15.28■□□□□ 0.04
TRAF3IP3-213ENST00000478359 BCL11AQ9H165 835 aa15.28■□□□□ 0.04
TRAF3IP3-213ENST00000478359 GLI3P10071 1580 aa15.28■□□□□ 0.04
TRAF3IP3-213ENST00000478359 MYL6BP14649 208 aa15.27■□□□□ 0.04
TRAF3IP3-213ENST00000478359 CWF19L2Q2TBE0 894 aaKnown RBP15.27■□□□□ 0.04
TRAF3IP3-213ENST00000478359 CLASRPQ8N2M8 674 aaKnown RBP15.27■□□□□ 0.04
TRAF3IP3-213ENST00000478359 SLKQ9H2G2 1235 aaPredicted RBP15.27■□□□□ 0.04
TRAF3IP3-213ENST00000478359 CHMP5Q9NZZ3 219 aa15.27■□□□□ 0.04
TRAF3IP3-213ENST00000478359 USP16Q9Y5T5 823 aa15.27■□□□□ 0.04
TRAF3IP3-213ENST00000478359 NEURL1BA8MQ27 555 aa15.27■□□□□ 0.03
TRAF3IP3-213ENST00000478359 OS9Q13438 667 aaPredicted RBP15.27■□□□□ 0.03
TRAF3IP3-213ENST00000478359 LRP10Q7Z4F1 713 aa15.27■□□□□ 0.03
TRAF3IP3-213ENST00000478359 GPATCH3Q96I76 525 aa15.27■□□□□ 0.03
TRAF3IP3-213ENST00000478359 STRN4Q9NRL3 753 aa15.27■□□□□ 0.03
TRAF3IP3-213ENST00000478359 USP42Q9H9J4 1324 aaKnown RBP15.27■□□□□ 0.03
TRAF3IP3-213ENST00000478359 LTBP4Q8N2S1 1624 aa15.26■□□□□ 0.03
TRAF3IP3-213ENST00000478359 GCKRQ14397 625 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms