RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 DPEP1P16444 411 aa18.34■□□□□ 0.53
RCC1-211ENST00000478232 CANXP27824 592 aaKnown RBP18.34■□□□□ 0.53
RCC1-211ENST00000478232 C10orf71Q711Q0 1435 aa18.33■□□□□ 0.53
RCC1-211ENST00000478232 A0A087WZG4 1122 aa18.33■□□□□ 0.52
RCC1-211ENST00000478232 EIF5P55010 431 aaKnown RBP18.33■□□□□ 0.52
RCC1-211ENST00000478232 DDR1Q08345 913 aa18.33■□□□□ 0.52
RCC1-211ENST00000478232 PXDNLA1KZ92 1463 aa18.33■□□□□ 0.52
RCC1-211ENST00000478232 POLRMTO00411 1230 aaKnown RBP18.32■□□□□ 0.52
RCC1-211ENST00000478232 NEFMP07197 916 aa18.32■□□□□ 0.52
RCC1-211ENST00000478232 BCS1LQ9Y276 419 aa18.32■□□□□ 0.52
RCC1-211ENST00000478232 C4AP0C0L4 1744 aa18.32■□□□□ 0.52
RCC1-211ENST00000478232 COL15A1P39059 1388 aa18.31■□□□□ 0.52
RCC1-211ENST00000478232 KCNA3P22001 575 aa18.31■□□□□ 0.52
RCC1-211ENST00000478232 PIM2Q9P1W9 311 aa18.31■□□□□ 0.52
RCC1-211ENST00000478232 KCNQ3O43525 872 aa18.3■□□□□ 0.52
RCC1-211ENST00000478232 NFIXQ14938 502 aa18.3■□□□□ 0.52
RCC1-211ENST00000478232 MCM10Q7L590 875 aa18.3■□□□□ 0.52
RCC1-211ENST00000478232 PNNQ9H307 717 aaKnown RBP18.3■□□□□ 0.52
RCC1-211ENST00000478232 BCL2L12Q9HB09 334 aa18.3■□□□□ 0.52
RCC1-211ENST00000478232 VIRMAQ69YN4 1812 aaKnown RBP18.3■□□□□ 0.52
RCC1-211ENST00000478232 KIF13BQ9NQT8 1826 aa18.29■□□□□ 0.52
RCC1-211ENST00000478232 GIGYF1O75420 1035 aaPredicted RBP18.29■□□□□ 0.52
RCC1-211ENST00000478232 IL6STP40189 918 aaPredicted RBP18.29■□□□□ 0.52
RCC1-211ENST00000478232 C1QTNF8P60827 252 aa18.29■□□□□ 0.52
RCC1-211ENST00000478232 NPM2Q86SE8 214 aaKnown RBP18.29■□□□□ 0.52
RCC1-211ENST00000478232 UBR2Q8IWV8 1755 aa18.28■□□□□ 0.52
RCC1-211ENST00000478232 A1BGP04217 495 aa18.28■□□□□ 0.52
RCC1-211ENST00000478232 RALBP1Q15311 655 aa18.28■□□□□ 0.52
RCC1-211ENST00000478232 TAF7Q15545 349 aaPredicted RBP18.28■□□□□ 0.52
RCC1-211ENST00000478232 ARHGAP27Q6ZUM4 889 aa18.28■□□□□ 0.52
RCC1-211ENST00000478232 SERPINB2P05120 415 aa18.27■□□□□ 0.52
RCC1-211ENST00000478232 SNRPA1P09661 255 aaKnown RBP18.27■□□□□ 0.52
RCC1-211ENST00000478232 DCTN1Q14203 1278 aa18.27■□□□□ 0.52
RCC1-211ENST00000478232 ATP10DQ9P241 1426 aa18.26■□□□□ 0.51
RCC1-211ENST00000478232 DALRD3Q5D0E6 543 aaKnown RBP18.26■□□□□ 0.51
RCC1-211ENST00000478232 PLEKHF1Q96S99 279 aa18.26■□□□□ 0.51
RCC1-211ENST00000478232 GPBP1L1Q9HC44 474 aaPredicted RBP18.26■□□□□ 0.51
RCC1-211ENST00000478232 TBC1D2BQ9UPU7 963 aa18.26■□□□□ 0.51
RCC1-211ENST00000478232 USP16Q9Y5T5 823 aa18.26■□□□□ 0.51
RCC1-211ENST00000478232 DDX10Q13206 875 aaKnown RBP18.25■□□□□ 0.51
RCC1-211ENST00000478232 ZNF330Q9Y3S2 320 aaPredicted RBP18.25■□□□□ 0.51
RCC1-211ENST00000478232 SIPA1L3O60292 1781 aaPredicted RBP18.25■□□□□ 0.51
RCC1-211ENST00000478232 CHRNA5P30532 468 aa18.24■□□□□ 0.51
RCC1-211ENST00000478232 ADCY9O60503 1353 aa18.24■□□□□ 0.51
RCC1-211ENST00000478232 N4BP2Q86UW6 1770 aaPredicted RBP18.23■□□□□ 0.51
RCC1-211ENST00000478232 NFE2L2Q16236 605 aa18.23■□□□□ 0.51
RCC1-211ENST00000478232 BICDL1Q6ZP65 573 aa18.23■□□□□ 0.51
RCC1-211ENST00000478232 PNISRQ8TF01 805 aaKnown RBP18.23■□□□□ 0.51
RCC1-211ENST00000478232 KIAA1551Q9HCM1 1747 aa18.23■□□□□ 0.51
RCC1-211ENST00000478232 TBC1D9BQ66K14 1250 aa18.22■□□□□ 0.51
RCC1-211ENST00000478232 MIS18AQ9NYP9 233 aa18.21■□□□□ 0.51
RCC1-211ENST00000478232 MAPK8IP3Q9UPT6 1336 aa18.21■□□□□ 0.51
RCC1-211ENST00000478232 PRAMEF22A3QJZ6 481 aa18.2■□□□□ 0.5
RCC1-211ENST00000478232 H0YIN7 160 aa18.2■□□□□ 0.5
RCC1-211ENST00000478232 CAMTA2O94983 1202 aa18.2■□□□□ 0.5
RCC1-211ENST00000478232 DZIP3Q86Y13 1208 aaKnown RBP18.2■□□□□ 0.5
RCC1-211ENST00000478232 ZNF526Q8TF50 670 aaPredicted RBP18.2■□□□□ 0.5
RCC1-211ENST00000478232 SETDB2Q96T68 719 aa18.2■□□□□ 0.5
RCC1-211ENST00000478232 PDZRN3Q9UPQ7 1066 aa18.2■□□□□ 0.5
RCC1-211ENST00000478232 CLEC4GQ6UXB4 293 aa18.19■□□□□ 0.5
RCC1-211ENST00000478232 BRIP1Q9BX63 1249 aa18.19■□□□□ 0.5
RCC1-211ENST00000478232 C2CD5Q86YS7 1000 aa18.18■□□□□ 0.5
RCC1-211ENST00000478232 NBPF26B4DH59 902 aa18.17■□□□□ 0.5
RCC1-211ENST00000478232 RGL2O15211 777 aa18.17■□□□□ 0.5
RCC1-211ENST00000478232 PDE6BP35913 854 aa18.17■□□□□ 0.5
RCC1-211ENST00000478232 PIP4K2AP48426 406 aaPredicted RBP18.17■□□□□ 0.5
RCC1-211ENST00000478232 NBPF10Q6P3W6 841 aaKnown RBP18.17■□□□□ 0.5
RCC1-211ENST00000478232 NBPF15Q8N660 670 aa18.17■□□□□ 0.5
RCC1-211ENST00000478232 TTLL6Q8N841 843 aa18.17■□□□□ 0.5
RCC1-211ENST00000478232 CARMIL3Q8ND23 1372 aa18.17■□□□□ 0.5
RCC1-211ENST00000478232 SENP3-EIF4A1A0A087X0R7 540 aa18.16■□□□□ 0.5
RCC1-211ENST00000478232 C9orf131Q5VYM1 1079 aa18.16■□□□□ 0.5
RCC1-211ENST00000478232 PRR5LQ6MZQ0 368 aa18.16■□□□□ 0.5
RCC1-211ENST00000478232 ZNF652Q9Y2D9 606 aa18.16■□□□□ 0.5
RCC1-211ENST00000478232 MYBBP1AQ9BQG0 1328 aaKnown RBP18.16■□□□□ 0.5
RCC1-211ENST00000478232 NRXN2Q9P2S2 1712 aa18.15■□□□□ 0.5
RCC1-211ENST00000478232 RIPK4P57078 832 aa18.15■□□□□ 0.5
RCC1-211ENST00000478232 EIF4A1P60842 406 aaKnown RBP18.15■□□□□ 0.5
RCC1-211ENST00000478232 BRCA1P38398 1863 aaKnown RBP18.14■□□□□ 0.49
RCC1-211ENST00000478232 NPHP1O15259 732 aa18.14■□□□□ 0.49
RCC1-211ENST00000478232 CNBD1Q8NA66 436 aa18.14■□□□□ 0.49
RCC1-211ENST00000478232 THUMPD2Q9BTF0 503 aaKnown RBP18.14■□□□□ 0.49
RCC1-211ENST00000478232 AFDNP55196 1824 aaKnown RBP18.13■□□□□ 0.49
RCC1-211ENST00000478232 KIF3CO14782 793 aa18.12■□□□□ 0.49
RCC1-211ENST00000478232 TMPOP42166 694 aaKnown RBP18.12■□□□□ 0.49
RCC1-211ENST00000478232 ST5P78524 1137 aa18.12■□□□□ 0.49
RCC1-211ENST00000478232 CCDC24Q8N4L8 307 aa18.12■□□□□ 0.49
RCC1-211ENST00000478232 ZNF622Q969S3 477 aaKnown RBP eCLIP18.12■□□□□ 0.49
RCC1-211ENST00000478232 BABAM1Q9NWV8 329 aa18.12■□□□□ 0.49
RCC1-211ENST00000478232 RNF181Q9P0P0 153 aa18.12■□□□□ 0.49
RCC1-211ENST00000478232 ARFGEF1Q9Y6D6 1849 aa18.12■□□□□ 0.49
RCC1-211ENST00000478232 LMOD3Q0VAK6 560 aa18.11■□□□□ 0.49
RCC1-211ENST00000478232 TPTE2Q6XPS3 522 aa18.11■□□□□ 0.49
RCC1-211ENST00000478232 NBPF5PQ86XG9 351 aaPredicted RBP18.11■□□□□ 0.49
RCC1-211ENST00000478232 TSPYL4Q9UJ04 414 aa18.1■□□□□ 0.49
RCC1-211ENST00000478232 NIP7Q9Y221 180 aaKnown RBP eCLIP18.1■□□□□ 0.49
RCC1-211ENST00000478232 RRP7AQ9Y3A4 280 aaKnown RBP18.1■□□□□ 0.49
RCC1-211ENST00000478232 ERVV-1B6SEH8 477 aa18.09■□□□□ 0.49
RCC1-211ENST00000478232 WDR43Q15061 677 aaKnown RBP eCLIP18.09■□□□□ 0.49
RCC1-211ENST00000478232 STYK1Q6J9G0 422 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms