RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 NRXN2Q9P2S2 1712 aa22.57■■□□□ 1.2
TRIM13-208ENST00000478111 PIM2Q9P1W9 311 aa22.57■■□□□ 1.2
TRIM13-208ENST00000478111 NARFQ9UHQ1 456 aa22.57■■□□□ 1.2
TRIM13-208ENST00000478111 ZPR1O75312 459 aa22.56■■□□□ 1.2
TRIM13-208ENST00000478111 CNGB1Q14028 1251 aaPredicted RBP22.56■■□□□ 1.2
TRIM13-208ENST00000478111 IL17REQ8NFR9 667 aa22.56■■□□□ 1.2
TRIM13-208ENST00000478111 BCL2L12Q9HB09 334 aa22.56■■□□□ 1.2
TRIM13-208ENST00000478111 SBF1O95248 1867 aa22.56■■□□□ 1.2
TRIM13-208ENST00000478111 COL15A1P39059 1388 aa22.55■■□□□ 1.2
TRIM13-208ENST00000478111 CHRNA5P30532 468 aa22.55■■□□□ 1.2
TRIM13-208ENST00000478111 U2SURPO15042 1029 aaKnown RBP22.54■■□□□ 1.2
TRIM13-208ENST00000478111 HSPA6P17066 643 aa22.54■■□□□ 1.2
TRIM13-208ENST00000478111 NFIXQ14938 502 aa22.54■■□□□ 1.2
TRIM13-208ENST00000478111 DALRD3Q5D0E6 543 aaKnown RBP22.53■■□□□ 1.2
TRIM13-208ENST00000478111 GNAT3A8MTJ3 354 aa22.51■■□□□ 1.19
TRIM13-208ENST00000478111 GAS2L2Q8NHY3 880 aa22.51■■□□□ 1.19
TRIM13-208ENST00000478111 DLEC1Q9Y238 1755 aa22.5■■□□□ 1.19
TRIM13-208ENST00000478111 CANXP27824 592 aaKnown RBP22.5■■□□□ 1.19
TRIM13-208ENST00000478111 EIF5P55010 431 aaKnown RBP22.5■■□□□ 1.19
TRIM13-208ENST00000478111 C9orf131Q5VYM1 1079 aa22.5■■□□□ 1.19
TRIM13-208ENST00000478111 ZNF496Q96IT1 587 aaPredicted RBP22.5■■□□□ 1.19
TRIM13-208ENST00000478111 ZNF790Q6PG37 636 aa22.49■■□□□ 1.19
TRIM13-208ENST00000478111 TTC5Q8N0Z6 440 aa22.49■■□□□ 1.19
TRIM13-208ENST00000478111 PHACTR3Q96KR7 559 aa22.49■■□□□ 1.19
TRIM13-208ENST00000478111 HEG1Q9ULI3 1381 aa22.49■■□□□ 1.19
TRIM13-208ENST00000478111 STARD3NLO95772 234 aa22.48■■□□□ 1.19
TRIM13-208ENST00000478111 SERPINB2P05120 415 aa22.48■■□□□ 1.19
TRIM13-208ENST00000478111 TEFQ10587 303 aa22.48■■□□□ 1.19
TRIM13-208ENST00000478111 NMRK2Q9NPI5 230 aa22.48■■□□□ 1.19
TRIM13-208ENST00000478111 CEMIPQ8WUJ3 1361 aa22.48■■□□□ 1.19
TRIM13-208ENST00000478111 RSPH6AQ9H0K4 717 aa22.47■■□□□ 1.19
TRIM13-208ENST00000478111 TOMM70O94826 608 aa22.45■■□□□ 1.18
TRIM13-208ENST00000478111 PRKAR2BP31323 418 aa22.45■■□□□ 1.18
TRIM13-208ENST00000478111 CARMIL3Q8ND23 1372 aa22.45■■□□□ 1.18
TRIM13-208ENST00000478111 SCN7AQ01118 1682 aa22.45■■□□□ 1.18
TRIM13-208ENST00000478111 ANKRD31Q8N7Z5 1873 aa22.45■■□□□ 1.18
TRIM13-208ENST00000478111 KCNQ3O43525 872 aa22.44■■□□□ 1.18
TRIM13-208ENST00000478111 CCDC88AQ3V6T2 1871 aa22.44■■□□□ 1.18
TRIM13-208ENST00000478111 TEX13AQ9BXU3 409 aaPredicted RBP22.44■■□□□ 1.18
TRIM13-208ENST00000478111 RNF181Q9P0P0 153 aa22.43■■□□□ 1.18
TRIM13-208ENST00000478111 A0A087WZG4 1122 aa22.42■■□□□ 1.18
TRIM13-208ENST00000478111 PPP2R1AP30153 589 aa22.42■■□□□ 1.18
TRIM13-208ENST00000478111 TBC1D9BQ66K14 1250 aa22.42■■□□□ 1.18
TRIM13-208ENST00000478111 CFAP53Q96M91 514 aa22.42■■□□□ 1.18
TRIM13-208ENST00000478111 FMNL2Q96PY5 1086 aa22.42■■□□□ 1.18
TRIM13-208ENST00000478111 A1BGP04217 495 aa22.41■■□□□ 1.18
TRIM13-208ENST00000478111 IL6STP40189 918 aaPredicted RBP22.41■■□□□ 1.18
TRIM13-208ENST00000478111 BICDL1Q6ZP65 573 aa22.41■■□□□ 1.18
TRIM13-208ENST00000478111 TBC1D2BQ9UPU7 963 aa22.41■■□□□ 1.18
TRIM13-208ENST00000478111 PRELPP51888 382 aa22.4■■□□□ 1.18
TRIM13-208ENST00000478111 BTBD11A6QL63 1104 aa22.39■■□□□ 1.17
TRIM13-208ENST00000478111 RASSF7Q02833 373 aa22.39■■□□□ 1.17
TRIM13-208ENST00000478111 C2CD5Q86YS7 1000 aa22.39■■□□□ 1.17
TRIM13-208ENST00000478111 TTLL6Q8N841 843 aa22.39■■□□□ 1.17
TRIM13-208ENST00000478111 BCORQ6W2J9 1755 aa22.38■■□□□ 1.17
TRIM13-208ENST00000478111 NUDCQ9Y266 331 aa22.38■■□□□ 1.17
TRIM13-208ENST00000478111 COL11A2P13942 1736 aaPredicted RBP22.37■■□□□ 1.17
TRIM13-208ENST00000478111 TNRC6CQ9HCJ0 1690 aaKnown RBP22.37■■□□□ 1.17
TRIM13-208ENST00000478111 H0YIN7 160 aa22.37■■□□□ 1.17
TRIM13-208ENST00000478111 U2AF1L5P0DN76 240 aaPredicted RBP22.37■■□□□ 1.17
TRIM13-208ENST00000478111 U2AF1Q01081 240 aaKnown RBP eCLIP22.37■■□□□ 1.17
TRIM13-208ENST00000478111 RBM46Q8TBY0 533 aaKnown RBP22.37■■□□□ 1.17
TRIM13-208ENST00000478111 USP16Q9Y5T5 823 aa22.37■■□□□ 1.17
TRIM13-208ENST00000478111 KDM2BQ8NHM5 1336 aa22.36■■□□□ 1.17
TRIM13-208ENST00000478111 PRAMEF22A3QJZ6 481 aa22.36■■□□□ 1.17
TRIM13-208ENST00000478111 CAMTA2O94983 1202 aa22.36■■□□□ 1.17
TRIM13-208ENST00000478111 APLP1P51693 650 aa22.36■■□□□ 1.17
TRIM13-208ENST00000478111 PRR5LQ6MZQ0 368 aa22.36■■□□□ 1.17
TRIM13-208ENST00000478111 DNAJC5GQ8N7S2 189 aa22.36■■□□□ 1.17
TRIM13-208ENST00000478111 ZNF330Q9Y3S2 320 aaPredicted RBP22.36■■□□□ 1.17
TRIM13-208ENST00000478111 MCM10Q7L590 875 aa22.35■■□□□ 1.17
TRIM13-208ENST00000478111 CCDC24Q8N4L8 307 aa22.35■■□□□ 1.17
TRIM13-208ENST00000478111 RRAGCQ9HB90 399 aa22.35■■□□□ 1.17
TRIM13-208ENST00000478111 LMNB1P20700 586 aa22.34■■□□□ 1.17
TRIM13-208ENST00000478111 BRIP1Q9BX63 1249 aa22.34■■□□□ 1.17
TRIM13-208ENST00000478111 FER1L6Q2WGJ9 1857 aa22.34■■□□□ 1.17
TRIM13-208ENST00000478111 WDR90Q96KV7 1748 aa22.34■■□□□ 1.17
TRIM13-208ENST00000478111 ZC3H4Q9UPT8 1303 aaKnown RBP22.33■■□□□ 1.17
TRIM13-208ENST00000478111 NFKBIEO00221 500 aa22.33■■□□□ 1.17
TRIM13-208ENST00000478111 PCNTO95613 3336 aa22.33■■□□□ 1.17
TRIM13-208ENST00000478111 DLG5Q8TDM6 1919 aa22.33■■□□□ 1.16
TRIM13-208ENST00000478111 TIAM2Q8IVF5 1701 aa22.32■■□□□ 1.16
TRIM13-208ENST00000478111 DICER1Q9UPY3 1922 aaKnown RBP22.32■■□□□ 1.16
TRIM13-208ENST00000478111 PIP4K2AP48426 406 aaPredicted RBP22.32■■□□□ 1.16
TRIM13-208ENST00000478111 DCTN1Q14203 1278 aa22.32■■□□□ 1.16
TRIM13-208ENST00000478111 CACNA1SQ13698 1873 aa22.31■■□□□ 1.16
TRIM13-208ENST00000478111 PDE6BP35913 854 aa22.31■■□□□ 1.16
TRIM13-208ENST00000478111 DZIP3Q86Y13 1208 aaKnown RBP22.31■■□□□ 1.16
TRIM13-208ENST00000478111 RTF1Q92541 710 aaKnown RBP22.31■■□□□ 1.16
TRIM13-208ENST00000478111 PDZRN3Q9UPQ7 1066 aa22.31■■□□□ 1.16
TRIM13-208ENST00000478111 SLX4Q8IY92 1834 aa22.3■■□□□ 1.16
TRIM13-208ENST00000478111 HTATSF1O43719 755 aaKnown RBP22.3■■□□□ 1.16
TRIM13-208ENST00000478111 SNRPA1P09661 255 aaKnown RBP22.3■■□□□ 1.16
TRIM13-208ENST00000478111 C16orf71Q8IYS4 520 aaPredicted RBP22.3■■□□□ 1.16
TRIM13-208ENST00000478111 SETDB2Q96T68 719 aa22.3■■□□□ 1.16
TRIM13-208ENST00000478111 FSTL1Q12841 308 aa22.29■■□□□ 1.16
TRIM13-208ENST00000478111 IFFO2Q5TF58 517 aa22.29■■□□□ 1.16
TRIM13-208ENST00000478111 ZNF622Q969S3 477 aaKnown RBP eCLIP22.29■■□□□ 1.16
TRIM13-208ENST00000478111 ARFGEF2Q9Y6D5 1785 aa22.28■■□□□ 1.16
TRIM13-208ENST00000478111 GLTPD2A6NH11 291 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms