RNA–Protein interactions for RNA: ENST00000477563.6

RBBP4-211, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-211ENST00000477563 EIF4A2Q14240 407 aaKnown RBP10.59□□□□□ -0.71
RBBP4-211ENST00000477563 DCAF5Q96JK2 942 aa10.59□□□□□ -0.71
RBBP4-211ENST00000477563 TJP1Q07157 1748 aa10.58□□□□□ -0.72
RBBP4-211ENST00000477563 PPM1GO15355 546 aaPredicted RBP10.58□□□□□ -0.72
RBBP4-211ENST00000477563 FSTL1Q12841 308 aa10.58□□□□□ -0.72
RBBP4-211ENST00000477563 ARHGAP27Q6ZUM4 889 aa10.58□□□□□ -0.72
RBBP4-211ENST00000477563 NMRK2Q9NPI5 230 aa10.58□□□□□ -0.72
RBBP4-211ENST00000477563 KDM6AO15550 1401 aaPredicted RBP10.58□□□□□ -0.72
RBBP4-211ENST00000477563 SCN11AQ9UI33 1791 aa10.57□□□□□ -0.72
RBBP4-211ENST00000477563 FCHSD2O94868 740 aa10.57□□□□□ -0.72
RBBP4-211ENST00000477563 RFC4P35249 363 aa10.57□□□□□ -0.72
RBBP4-211ENST00000477563 PARP3Q9Y6F1 533 aa10.57□□□□□ -0.72
RBBP4-211ENST00000477563 DLEC1Q9Y238 1755 aa10.57□□□□□ -0.72
RBBP4-211ENST00000477563 NRXN2Q9P2S2 1712 aa10.56□□□□□ -0.72
RBBP4-211ENST00000477563 C9orf131Q5VYM1 1079 aa10.56□□□□□ -0.72
RBBP4-211ENST00000477563 KLRG1Q96E93 195 aa10.56□□□□□ -0.72
RBBP4-211ENST00000477563 PIM2Q9P1W9 311 aa10.56□□□□□ -0.72
RBBP4-211ENST00000477563 AFDNP55196 1824 aaKnown RBP10.56□□□□□ -0.72
RBBP4-211ENST00000477563 USP42Q9H9J4 1324 aaKnown RBP10.56□□□□□ -0.72
RBBP4-211ENST00000477563 KCPQ6ZWJ8 1503 aa10.55□□□□□ -0.72
RBBP4-211ENST00000477563 GABBR2O75899 941 aa10.55□□□□□ -0.72
RBBP4-211ENST00000477563 AMOTQ4VCS5 1084 aa10.55□□□□□ -0.72
RBBP4-211ENST00000477563 PLEKHO1Q53GL0 409 aaPredicted RBP10.55□□□□□ -0.72
RBBP4-211ENST00000477563 VIRMAQ69YN4 1812 aaKnown RBP10.55□□□□□ -0.72
RBBP4-211ENST00000477563 KDM2BQ8NHM5 1336 aa10.55□□□□□ -0.72
RBBP4-211ENST00000477563 ZC3H4Q9UPT8 1303 aaKnown RBP10.55□□□□□ -0.72
RBBP4-211ENST00000477563 TM4SF1P30408 202 aa10.54□□□□□ -0.72
RBBP4-211ENST00000477563 DALRD3Q5D0E6 543 aaKnown RBP10.54□□□□□ -0.72
RBBP4-211ENST00000477563 CCDC88AQ3V6T2 1871 aa10.53□□□□□ -0.72
RBBP4-211ENST00000477563 CRKLP46109 303 aaKnown RBP10.53□□□□□ -0.72
RBBP4-211ENST00000477563 MNX1P50219 401 aaPredicted RBP10.53□□□□□ -0.72
RBBP4-211ENST00000477563 DDR1Q08345 913 aa10.53□□□□□ -0.72
RBBP4-211ENST00000477563 C16orf71Q8IYS4 520 aaPredicted RBP10.53□□□□□ -0.72
RBBP4-211ENST00000477563 CCER1Q8TC90 406 aaPredicted RBP10.53□□□□□ -0.72
RBBP4-211ENST00000477563 POLRMTO00411 1230 aaKnown RBP10.52□□□□□ -0.73
RBBP4-211ENST00000477563 CABP4P57796 275 aa10.52□□□□□ -0.73
RBBP4-211ENST00000477563 COL13A1Q5TAT6 717 aaPredicted RBP10.52□□□□□ -0.73
RBBP4-211ENST00000477563 INTS5Q6P9B9 1019 aaKnown RBP10.52□□□□□ -0.73
RBBP4-211ENST00000477563 DICER1Q9UPY3 1922 aaKnown RBP10.51□□□□□ -0.73
RBBP4-211ENST00000477563 MTHFSP49914 203 aa10.51□□□□□ -0.73
RBBP4-211ENST00000477563 ZNF530Q6P9A1 599 aaPredicted RBP10.51□□□□□ -0.73
RBBP4-211ENST00000477563 NFATC2IPQ8NCF5 419 aa10.51□□□□□ -0.73
RBBP4-211ENST00000477563 RRAGCQ9HB90 399 aa10.51□□□□□ -0.73
RBBP4-211ENST00000477563 RNF181Q9P0P0 153 aa10.51□□□□□ -0.73
RBBP4-211ENST00000477563 SRP68Q9UHB9 627 aaKnown RBP10.51□□□□□ -0.73
RBBP4-211ENST00000477563 TIAM2Q8IVF5 1701 aa10.5□□□□□ -0.73
RBBP4-211ENST00000477563 MRC1P22897 1456 aa10.5□□□□□ -0.73
RBBP4-211ENST00000477563 PTCD1O75127 700 aaKnown RBP10.5□□□□□ -0.73
RBBP4-211ENST00000477563 HTRA3P83110 453 aa10.5□□□□□ -0.73
RBBP4-211ENST00000477563 SMC1BQ8NDV3 1235 aa10.5□□□□□ -0.73
RBBP4-211ENST00000477563 UBR2Q8IWV8 1755 aa10.49□□□□□ -0.73
RBBP4-211ENST00000477563 GLTPD2A6NH11 291 aa10.49□□□□□ -0.73
RBBP4-211ENST00000477563 CHRNA5P30532 468 aa10.49□□□□□ -0.73
RBBP4-211ENST00000477563 C1orf141Q5JVX7 400 aa10.49□□□□□ -0.73
RBBP4-211ENST00000477563 SOS1Q07889 1333 aaPredicted RBP10.49□□□□□ -0.73
RBBP4-211ENST00000477563 FER1L6Q2WGJ9 1857 aa10.49□□□□□ -0.73
RBBP4-211ENST00000477563 LMNB1P20700 586 aa10.48□□□□□ -0.73
RBBP4-211ENST00000477563 PRELPP51888 382 aa10.48□□□□□ -0.73
RBBP4-211ENST00000477563 USPL1Q5W0Q7 1092 aa10.48□□□□□ -0.73
RBBP4-211ENST00000477563 NARFQ9UHQ1 456 aa10.48□□□□□ -0.73
RBBP4-211ENST00000477563 ANKRD31Q8N7Z5 1873 aa10.47□□□□□ -0.73
RBBP4-211ENST00000477563 ZPR1O75312 459 aa10.47□□□□□ -0.73
RBBP4-211ENST00000477563 CYP19A1P11511 503 aaPredicted RBP10.47□□□□□ -0.73
RBBP4-211ENST00000477563 VEGFAP15692 232 aaPredicted RBP10.47□□□□□ -0.73
RBBP4-211ENST00000477563 IL13P35225 146 aa10.47□□□□□ -0.73
RBBP4-211ENST00000477563 TNNT2P45379 298 aaPredicted RBP10.47□□□□□ -0.73
RBBP4-211ENST00000477563 AKAP4Q5JQC9 854 aa10.47□□□□□ -0.73
RBBP4-211ENST00000477563 AEBP1Q8IUX7 1158 aa10.47□□□□□ -0.73
RBBP4-211ENST00000477563 SLC52A2Q9HAB3 445 aa10.47□□□□□ -0.73
RBBP4-211ENST00000477563 CLCN6P51797 869 aa10.46□□□□□ -0.73
RBBP4-211ENST00000477563 EIF4G2P78344 907 aaKnown RBP eCLIP10.46□□□□□ -0.73
RBBP4-211ENST00000477563 NFIXQ14938 502 aa10.46□□□□□ -0.73
RBBP4-211ENST00000477563 SULT6B1Q6IMI4 303 aa10.46□□□□□ -0.73
RBBP4-211ENST00000477563 DNAJC10Q8IXB1 793 aa10.46□□□□□ -0.73
RBBP4-211ENST00000477563 VSIG10Q8N0Z9 540 aa10.46□□□□□ -0.73
RBBP4-211ENST00000477563 PANK3Q9H999 370 aa10.46□□□□□ -0.73
RBBP4-211ENST00000477563 BCL2L12Q9HB09 334 aa10.46□□□□□ -0.73
RBBP4-211ENST00000477563 ARFGEF2Q9Y6D5 1785 aa10.45□□□□□ -0.74
RBBP4-211ENST00000477563 COL15A1P39059 1388 aa10.45□□□□□ -0.74
RBBP4-211ENST00000477563 POTECB2RU33 542 aa10.45□□□□□ -0.74
RBBP4-211ENST00000477563 RASSF7Q02833 373 aa10.45□□□□□ -0.74
RBBP4-211ENST00000477563 TTLL6Q8N841 843 aa10.45□□□□□ -0.74
RBBP4-211ENST00000477563 ZNF579Q8NAF0 562 aaKnown RBP10.45□□□□□ -0.74
RBBP4-211ENST00000477563 NFKBIEO00221 500 aa10.44□□□□□ -0.74
RBBP4-211ENST00000477563 SERPINB2P05120 415 aa10.44□□□□□ -0.74
RBBP4-211ENST00000477563 TNS4Q8IZW8 715 aa10.44□□□□□ -0.74
RBBP4-211ENST00000477563 LGR6Q9HBX8 967 aa10.44□□□□□ -0.74
RBBP4-211ENST00000477563 PDZRN3Q9UPQ7 1066 aa10.44□□□□□ -0.74
RBBP4-211ENST00000477563 SIPA1L3O60292 1781 aaPredicted RBP10.44□□□□□ -0.74
RBBP4-211ENST00000477563 SCN7AQ01118 1682 aa10.44□□□□□ -0.74
RBBP4-211ENST00000477563 RNMTO43148 476 aaKnown RBP10.43□□□□□ -0.74
RBBP4-211ENST00000477563 HSPA1AP0DMV8 641 aaKnown RBP10.43□□□□□ -0.74
RBBP4-211ENST00000477563 HSPA1BP0DMV9 641 aaKnown RBP10.43□□□□□ -0.74
RBBP4-211ENST00000477563 ZBTB1Q9Y2K1 713 aa10.43□□□□□ -0.74
RBBP4-211ENST00000477563 COL11A2P13942 1736 aaPredicted RBP10.43□□□□□ -0.74
RBBP4-211ENST00000477563 LTBP3Q9NS15 1303 aa10.42□□□□□ -0.74
RBBP4-211ENST00000477563 H0YIN7 160 aa10.42□□□□□ -0.74
RBBP4-211ENST00000477563 EIF5P55010 431 aaKnown RBP10.42□□□□□ -0.74
RBBP4-211ENST00000477563 MORC1Q86VD1 984 aa10.42□□□□□ -0.74
RBBP4-211ENST00000477563 MIER1Q8N108 512 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms