RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 NOD1Q9Y239 953 aa8.28□□□□□ -1.08
VPS45-207ENST00000477558 FANCAO15360 1455 aa8.27□□□□□ -1.09
VPS45-207ENST00000477558 STAU1O95793 577 aaKnown RBP8.27□□□□□ -1.09
VPS45-207ENST00000477558 MYCP01106 439 aaPredicted RBP8.27□□□□□ -1.09
VPS45-207ENST00000477558 Q6ZVU0 165 aa8.27□□□□□ -1.09
VPS45-207ENST00000477558 KDF1Q8NAX2 398 aaPredicted RBP8.27□□□□□ -1.09
VPS45-207ENST00000477558 ESF1Q9H501 851 aaKnown RBP8.27□□□□□ -1.09
VPS45-207ENST00000477558 VRTNQ9H8Y1 702 aa8.27□□□□□ -1.09
VPS45-207ENST00000477558 CDK11AQ9UQ88 783 aaPredicted RBP8.27□□□□□ -1.09
VPS45-207ENST00000477558 PCDHGA11Q9Y5H2 935 aa8.27□□□□□ -1.09
VPS45-207ENST00000477558 SUPT6HQ7KZ85 1726 aaKnown RBP8.27□□□□□ -1.09
VPS45-207ENST00000477558 ZMYM4Q5VZL5 1548 aa8.27□□□□□ -1.09
VPS45-207ENST00000477558 ITSN2Q9NZM3 1697 aa8.26□□□□□ -1.09
VPS45-207ENST00000477558 LRRC9Q6ZRR7 1453 aa8.26□□□□□ -1.09
VPS45-207ENST00000477558 ABCC1P33527 1531 aa8.26□□□□□ -1.09
VPS45-207ENST00000477558 ZBTB7BO15156 539 aaPredicted RBP8.26□□□□□ -1.09
VPS45-207ENST00000477558 ATP13A2Q9NQ11 1180 aa8.26□□□□□ -1.09
VPS45-207ENST00000477558 GPATCH8Q9UKJ3 1502 aaKnown RBP8.25□□□□□ -1.09
VPS45-207ENST00000477558 KDM5CP41229 1560 aa8.25□□□□□ -1.09
VPS45-207ENST00000477558 GTF2IP78347 998 aa8.25□□□□□ -1.09
VPS45-207ENST00000477558 CLDN10P78369 228 aa8.25□□□□□ -1.09
VPS45-207ENST00000477558 SIRT1Q96EB6 747 aa8.25□□□□□ -1.09
VPS45-207ENST00000477558 SENP2Q9HC62 589 aa8.25□□□□□ -1.09
VPS45-207ENST00000477558 SAMD9LQ8IVG5 1584 aa8.24□□□□□ -1.09
VPS45-207ENST00000477558 ADH1AP07327 375 aa8.24□□□□□ -1.09
VPS45-207ENST00000477558 OGFOD1Q8N543 542 aa8.24□□□□□ -1.09
VPS45-207ENST00000477558 ZNF395Q9H8N7 513 aaPredicted RBP8.24□□□□□ -1.09
VPS45-207ENST00000477558 KIAA1024Q9UPX6 916 aa8.24□□□□□ -1.09
VPS45-207ENST00000477558 AKNAQ7Z591 1439 aa8.24□□□□□ -1.09
VPS45-207ENST00000477558 NCOA2Q15596 1464 aa8.24□□□□□ -1.09
VPS45-207ENST00000477558 ATP5J2-PTCD1G3V325 749 aa8.23□□□□□ -1.09
VPS45-207ENST00000477558 TERTO14746 1132 aaKnown RBP8.23□□□□□ -1.09
VPS45-207ENST00000477558 BMP1P13497 986 aa8.23□□□□□ -1.09
VPS45-207ENST00000477558 SNRPBP14678 240 aaKnown RBP8.23□□□□□ -1.09
VPS45-207ENST00000477558 RASA1P20936 1047 aa8.23□□□□□ -1.09
VPS45-207ENST00000477558 RELBQ01201 579 aa8.23□□□□□ -1.09
VPS45-207ENST00000477558 CRTC2Q53ET0 693 aaPredicted RBP8.23□□□□□ -1.09
VPS45-207ENST00000477558 MEIOBQ8N635 442 aa8.23□□□□□ -1.09
VPS45-207ENST00000477558 TRIM47Q96LD4 638 aa8.23□□□□□ -1.09
VPS45-207ENST00000477558 POGZQ7Z3K3 1410 aa8.23□□□□□ -1.09
VPS45-207ENST00000477558 ARHGEF40Q8TER5 1519 aa8.23□□□□□ -1.09
VPS45-207ENST00000477558 TRIM46Q7Z4K8 759 aa8.22□□□□□ -1.09
VPS45-207ENST00000477558 PBXIP1Q96AQ6 731 aa8.22□□□□□ -1.09
VPS45-207ENST00000477558 RAB6BQ9NRW1 208 aa8.22□□□□□ -1.09
VPS45-207ENST00000477558 DNAAF2Q9NVR5 837 aaKnown RBP8.22□□□□□ -1.09
VPS45-207ENST00000477558 MTUS2Q5JR59 1369 aa8.22□□□□□ -1.09
VPS45-207ENST00000477558 ARHGAP5Q13017 1502 aa8.22□□□□□ -1.09
VPS45-207ENST00000477558 DENND4BO75064 1496 aaPredicted RBP8.21□□□□□ -1.09
VPS45-207ENST00000477558 ADGRL1O94910 1474 aa8.21□□□□□ -1.09
VPS45-207ENST00000477558 PTGIRP43119 386 aa8.21□□□□□ -1.09
VPS45-207ENST00000477558 CYP2U1Q7Z449 544 aa8.21□□□□□ -1.09
VPS45-207ENST00000477558 TRIM50Q86XT4 487 aa8.21□□□□□ -1.09
VPS45-207ENST00000477558 TRIM52Q96A61 297 aa8.21□□□□□ -1.09
VPS45-207ENST00000477558 KIFC2Q96AC6 838 aa8.21□□□□□ -1.09
VPS45-207ENST00000477558 ZNF594Q96JF6 807 aaPredicted RBP8.21□□□□□ -1.09
VPS45-207ENST00000477558 ARHGEF12Q9NZN5 1544 aa8.21□□□□□ -1.09
VPS45-207ENST00000477558 KIAA1107Q9UPP5 1409 aa8.21□□□□□ -1.1
VPS45-207ENST00000477558 LOC100996750A0A140TA64 210 aa8.2□□□□□ -1.1
VPS45-207ENST00000477558 A0A1W2PRU2 124 aa8.2□□□□□ -1.1
VPS45-207ENST00000477558 DKK1O94907 266 aa8.2□□□□□ -1.1
VPS45-207ENST00000477558 PTK7Q13308 1070 aa8.2□□□□□ -1.1
VPS45-207ENST00000477558 C6orf118Q5T5N4 469 aa8.2□□□□□ -1.1
VPS45-207ENST00000477558 LCE2CQ5TA81 110 aa8.2□□□□□ -1.1
VPS45-207ENST00000477558 MRPL14Q6P1L8 145 aaKnown RBP8.2□□□□□ -1.1
VPS45-207ENST00000477558 LARP1Q6PKG0 1096 aaKnown RBP8.2□□□□□ -1.1
VPS45-207ENST00000477558 KRTAP4-6Q9BYQ5 205 aa8.2□□□□□ -1.1
VPS45-207ENST00000477558 ARHGEF10LQ9HCE6 1279 aa8.2□□□□□ -1.1
VPS45-207ENST00000477558 MAGI2Q86UL8 1455 aa8.2□□□□□ -1.1
VPS45-207ENST00000477558 TMEM229AB2RXF0 380 aa8.2□□□□□ -1.1
VPS45-207ENST00000477558 ATP1A2P50993 1020 aa8.2□□□□□ -1.1
VPS45-207ENST00000477558 SCNN1DP51172 638 aa8.2□□□□□ -1.1
VPS45-207ENST00000477558 PSME1Q06323 249 aa8.2□□□□□ -1.1
VPS45-207ENST00000477558 CCDC102BQ68D86 513 aa8.2□□□□□ -1.1
VPS45-207ENST00000477558 LINC00528Q8N1L1 170 aa8.2□□□□□ -1.1
VPS45-207ENST00000477558 PURBQ96QR8 312 aaKnown RBP8.2□□□□□ -1.1
VPS45-207ENST00000477558 TSEN34Q9BSV6 310 aaKnown RBP8.2□□□□□ -1.1
VPS45-207ENST00000477558 ETNK1Q9HBU6 452 aa8.2□□□□□ -1.1
VPS45-207ENST00000477558 INO80Q9ULG1 1556 aaPredicted RBP8.19□□□□□ -1.1
VPS45-207ENST00000477558 SYCP2Q9BX26 1530 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 ZNF518AQ6AHZ1 1483 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 SIGLEC1Q9BZZ2 1709 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 FAM196BA6NMK8 535 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 USP17L15C9J2P7 530 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 USP17L10C9JJH3 530 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 USP17L13C9JLJ4 530 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 USP17L12C9JPN9 530 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 USP17L11C9JVI0 530 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 USP17L21D6R901 530 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 USP17L18D6R9N7 530 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 USP17L22D6RA61 530 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 USP17L17D6RBQ6 530 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 USP17L19D6RCP7 530 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 USP17L20D6RJB6 530 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 GNRH1P01148 92 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 USP17L24Q0WX57 530 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 LARGE2Q8N3Y3 721 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.19□□□□□ -1.1
VPS45-207ENST00000477558 TPCN2Q8NHX9 752 aa8.19□□□□□ -1.1
VPS45-207ENST00000477558 HECW2Q9P2P5 1572 aa8.18□□□□□ -1.1
VPS45-207ENST00000477558 REREQ9P2R6 1566 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms