RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 COL15A1P39059 1388 aa20.9■□□□□ 0.94
CLDN11-204ENST00000477531 HEG1Q9ULI3 1381 aa20.9■□□□□ 0.94
CLDN11-204ENST00000477531 A0A087WZG4 1122 aa20.9■□□□□ 0.94
CLDN11-204ENST00000477531 A0A0G2JLW4 131 aa20.9■□□□□ 0.94
CLDN11-204ENST00000477531 CANXP27824 592 aaKnown RBP20.9■□□□□ 0.94
CLDN11-204ENST00000477531 NARFQ9UHQ1 456 aa20.9■□□□□ 0.94
CLDN11-204ENST00000477531 HTATSF1O43719 755 aaKnown RBP20.89■□□□□ 0.93
CLDN11-204ENST00000477531 PXDNLA1KZ92 1463 aa20.88■□□□□ 0.93
CLDN11-204ENST00000477531 PNNQ9H307 717 aaKnown RBP20.88■□□□□ 0.93
CLDN11-204ENST00000477531 BCS1LQ9Y276 419 aa20.88■□□□□ 0.93
CLDN11-204ENST00000477531 DPEP1P16444 411 aa20.87■□□□□ 0.93
CLDN11-204ENST00000477531 TM4SF1P30408 202 aa20.87■□□□□ 0.93
CLDN11-204ENST00000477531 DDR1Q08345 913 aa20.87■□□□□ 0.93
CLDN11-204ENST00000477531 RALBP1Q15311 655 aa20.86■□□□□ 0.93
CLDN11-204ENST00000477531 MCM10Q7L590 875 aa20.86■□□□□ 0.93
CLDN11-204ENST00000477531 UBR2Q8IWV8 1755 aa20.86■□□□□ 0.93
CLDN11-204ENST00000477531 KIF13BQ9NQT8 1826 aa20.85■□□□□ 0.93
CLDN11-204ENST00000477531 POLRMTO00411 1230 aaKnown RBP20.85■□□□□ 0.93
CLDN11-204ENST00000477531 EIF5P55010 431 aaKnown RBP20.85■□□□□ 0.93
CLDN11-204ENST00000477531 ZNF330Q9Y3S2 320 aaPredicted RBP20.85■□□□□ 0.93
CLDN11-204ENST00000477531 GIGYF1O75420 1035 aaPredicted RBP20.84■□□□□ 0.93
CLDN11-204ENST00000477531 PIM2Q9P1W9 311 aa20.84■□□□□ 0.93
CLDN11-204ENST00000477531 KCNQ3O43525 872 aa20.83■□□□□ 0.93
CLDN11-204ENST00000477531 IL6STP40189 918 aaPredicted RBP20.83■□□□□ 0.93
CLDN11-204ENST00000477531 DDX10Q13206 875 aaKnown RBP20.83■□□□□ 0.93
CLDN11-204ENST00000477531 DCTN1Q14203 1278 aa20.83■□□□□ 0.93
CLDN11-204ENST00000477531 NFIXQ14938 502 aa20.83■□□□□ 0.93
CLDN11-204ENST00000477531 SIPA1L3O60292 1781 aaPredicted RBP20.82■□□□□ 0.92
CLDN11-204ENST00000477531 MAPK8IP3Q9UPT6 1336 aa20.82■□□□□ 0.92
CLDN11-204ENST00000477531 TAF7Q15545 349 aaPredicted RBP20.82■□□□□ 0.92
CLDN11-204ENST00000477531 ARHGAP27Q6ZUM4 889 aa20.82■□□□□ 0.92
CLDN11-204ENST00000477531 N4BP2Q86UW6 1770 aaPredicted RBP20.82■□□□□ 0.92
CLDN11-204ENST00000477531 A1BGP04217 495 aa20.81■□□□□ 0.92
CLDN11-204ENST00000477531 SNRPA1P09661 255 aaKnown RBP20.81■□□□□ 0.92
CLDN11-204ENST00000477531 DALRD3Q5D0E6 543 aaKnown RBP20.81■□□□□ 0.92
CLDN11-204ENST00000477531 ATP10DQ9P241 1426 aa20.8■□□□□ 0.92
CLDN11-204ENST00000477531 SERPINB2P05120 415 aa20.8■□□□□ 0.92
CLDN11-204ENST00000477531 C1QTNF8P60827 252 aa20.8■□□□□ 0.92
CLDN11-204ENST00000477531 BCL2L12Q9HB09 334 aa20.8■□□□□ 0.92
CLDN11-204ENST00000477531 GPBP1L1Q9HC44 474 aaPredicted RBP20.8■□□□□ 0.92
CLDN11-204ENST00000477531 KCNA3P22001 575 aa20.79■□□□□ 0.92
CLDN11-204ENST00000477531 BICDL1Q6ZP65 573 aa20.79■□□□□ 0.92
CLDN11-204ENST00000477531 PNISRQ8TF01 805 aaKnown RBP20.79■□□□□ 0.92
CLDN11-204ENST00000477531 TBC1D2BQ9UPU7 963 aa20.79■□□□□ 0.92
CLDN11-204ENST00000477531 NFE2L2Q16236 605 aa20.78■□□□□ 0.92
CLDN11-204ENST00000477531 PLEKHF1Q96S99 279 aa20.78■□□□□ 0.92
CLDN11-204ENST00000477531 CHRNA5P30532 468 aa20.77■□□□□ 0.92
CLDN11-204ENST00000477531 USP16Q9Y5T5 823 aa20.77■□□□□ 0.92
CLDN11-204ENST00000477531 KIAA1551Q9HCM1 1747 aa20.77■□□□□ 0.92
CLDN11-204ENST00000477531 ZNF526Q8TF50 670 aaPredicted RBP20.76■□□□□ 0.91
CLDN11-204ENST00000477531 NPHP1O15259 732 aa20.75■□□□□ 0.91
CLDN11-204ENST00000477531 TBC1D9BQ66K14 1250 aa20.75■□□□□ 0.91
CLDN11-204ENST00000477531 DZIP3Q86Y13 1208 aaKnown RBP20.75■□□□□ 0.91
CLDN11-204ENST00000477531 SETDB2Q96T68 719 aa20.75■□□□□ 0.91
CLDN11-204ENST00000477531 ADCY9O60503 1353 aa20.74■□□□□ 0.91
CLDN11-204ENST00000477531 MIS18AQ9NYP9 233 aa20.74■□□□□ 0.91
CLDN11-204ENST00000477531 MYBBP1AQ9BQG0 1328 aaKnown RBP20.74■□□□□ 0.91
CLDN11-204ENST00000477531 PRAMEF22A3QJZ6 481 aa20.73■□□□□ 0.91
CLDN11-204ENST00000477531 H0YIN7 160 aa20.73■□□□□ 0.91
CLDN11-204ENST00000477531 CAMTA2O94983 1202 aa20.73■□□□□ 0.91
CLDN11-204ENST00000477531 PDZRN3Q9UPQ7 1066 aa20.73■□□□□ 0.91
CLDN11-204ENST00000477531 ZNF652Q9Y2D9 606 aa20.73■□□□□ 0.91
CLDN11-204ENST00000477531 CARMIL3Q8ND23 1372 aa20.72■□□□□ 0.91
CLDN11-204ENST00000477531 PIP4K2AP48426 406 aaPredicted RBP20.72■□□□□ 0.91
CLDN11-204ENST00000477531 C2CD5Q86YS7 1000 aa20.72■□□□□ 0.91
CLDN11-204ENST00000477531 TTLL6Q8N841 843 aa20.71■□□□□ 0.91
CLDN11-204ENST00000477531 AFDNP55196 1824 aaKnown RBP20.71■□□□□ 0.91
CLDN11-204ENST00000477531 BRCA1P38398 1863 aaKnown RBP20.71■□□□□ 0.91
CLDN11-204ENST00000477531 SENP3-EIF4A1A0A087X0R7 540 aa20.7■□□□□ 0.9
CLDN11-204ENST00000477531 PDE6BP35913 854 aa20.7■□□□□ 0.9
CLDN11-204ENST00000477531 CLEC4GQ6UXB4 293 aa20.7■□□□□ 0.9
CLDN11-204ENST00000477531 RIPK4P57078 832 aa20.69■□□□□ 0.9
CLDN11-204ENST00000477531 ST5P78524 1137 aa20.69■□□□□ 0.9
CLDN11-204ENST00000477531 LMOD3Q0VAK6 560 aa20.69■□□□□ 0.9
CLDN11-204ENST00000477531 WDR43Q15061 677 aaKnown RBP eCLIP20.69■□□□□ 0.9
CLDN11-204ENST00000477531 C9orf131Q5VYM1 1079 aa20.69■□□□□ 0.9
CLDN11-204ENST00000477531 CNBD1Q8NA66 436 aa20.69■□□□□ 0.9
CLDN11-204ENST00000477531 THUMPD2Q9BTF0 503 aaKnown RBP20.69■□□□□ 0.9
CLDN11-204ENST00000477531 BRIP1Q9BX63 1249 aa20.69■□□□□ 0.9
CLDN11-204ENST00000477531 NRXN2Q9P2S2 1712 aa20.68■□□□□ 0.9
CLDN11-204ENST00000477531 PRR5LQ6MZQ0 368 aa20.68■□□□□ 0.9
CLDN11-204ENST00000477531 ARFGEF1Q9Y6D6 1849 aa20.68■□□□□ 0.9
CLDN11-204ENST00000477531 SCN7AQ01118 1682 aa20.67■□□□□ 0.9
CLDN11-204ENST00000477531 DLG5Q8TDM6 1919 aa20.67■□□□□ 0.9
CLDN11-204ENST00000477531 EIF4A1P60842 406 aaKnown RBP20.67■□□□□ 0.9
CLDN11-204ENST00000477531 ZNF622Q969S3 477 aaKnown RBP eCLIP20.67■□□□□ 0.9
CLDN11-204ENST00000477531 NBPF26B4DH59 902 aa20.66■□□□□ 0.9
CLDN11-204ENST00000477531 NBPF10Q6P3W6 841 aaKnown RBP20.66■□□□□ 0.9
CLDN11-204ENST00000477531 NBPF15Q8N660 670 aa20.66■□□□□ 0.9
CLDN11-204ENST00000477531 TSPYL4Q9UJ04 414 aa20.66■□□□□ 0.9
CLDN11-204ENST00000477531 RGL2O15211 777 aa20.65■□□□□ 0.9
CLDN11-204ENST00000477531 TMPOP42166 694 aaKnown RBP20.65■□□□□ 0.9
CLDN11-204ENST00000477531 NBPF5PQ86XG9 351 aaPredicted RBP20.65■□□□□ 0.9
CLDN11-204ENST00000477531 RNF181Q9P0P0 153 aa20.65■□□□□ 0.9
CLDN11-204ENST00000477531 CCDC24Q8N4L8 307 aa20.64■□□□□ 0.89
CLDN11-204ENST00000477531 RRP7AQ9Y3A4 280 aaKnown RBP20.64■□□□□ 0.89
CLDN11-204ENST00000477531 NGEFQ8N5V2 710 aa20.63■□□□□ 0.89
CLDN11-204ENST00000477531 BABAM1Q9NWV8 329 aa20.63■□□□□ 0.89
CLDN11-204ENST00000477531 NIP7Q9Y221 180 aaKnown RBP eCLIP20.63■□□□□ 0.89
CLDN11-204ENST00000477531 ZEB1P37275 1124 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms