RNA–Protein interactions for RNA: ENST00000477434.5

PDZRN3-206, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-206ENST00000477434 COL25A1Q9BXS0 654 aaPredicted RBP7.52□□□□□ -1.21
PDZRN3-206ENST00000477434 NUCKS1Q9H1E3 243 aaKnown RBP7.52□□□□□ -1.21
PDZRN3-206ENST00000477434 GPAMQ9HCL2 828 aa7.52□□□□□ -1.21
PDZRN3-206ENST00000477434 USP3Q9Y6I4 520 aa7.52□□□□□ -1.21
PDZRN3-206ENST00000477434 BAZ1AQ9NRL2 1556 aaPredicted RBP7.51□□□□□ -1.21
PDZRN3-206ENST00000477434 CSB-PGBD3P0DP91 1061 aa7.51□□□□□ -1.21
PDZRN3-206ENST00000477434 SEC13P55735 322 aa7.51□□□□□ -1.21
PDZRN3-206ENST00000477434 KRT76Q01546 638 aa7.51□□□□□ -1.21
PDZRN3-206ENST00000477434 PTK7Q13308 1070 aa7.51□□□□□ -1.21
PDZRN3-206ENST00000477434 CRTC2Q53ET0 693 aaPredicted RBP7.51□□□□□ -1.21
PDZRN3-206ENST00000477434 C14orf37Q86TY3 774 aa7.51□□□□□ -1.21
PDZRN3-206ENST00000477434 TNS4Q8IZW8 715 aa7.51□□□□□ -1.21
PDZRN3-206ENST00000477434 PGBD3Q8N328 593 aa7.51□□□□□ -1.21
PDZRN3-206ENST00000477434 CABP1Q9NZU7 370 aa7.51□□□□□ -1.21
PDZRN3-206ENST00000477434 KIF21AQ7Z4S6 1674 aa7.51□□□□□ -1.21
PDZRN3-206ENST00000477434 SFI1A8K8P3 1242 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 USP17L15C9J2P7 530 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 USP17L10C9JJH3 530 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 USP17L13C9JLJ4 530 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 USP17L12C9JPN9 530 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 USP17L11C9JVI0 530 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 USP17L21D6R901 530 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 USP17L18D6R9N7 530 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 USP17L22D6RA61 530 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 USP17L17D6RBQ6 530 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 USP17L19D6RCP7 530 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 USP17L20D6RJB6 530 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 USP17L24Q0WX57 530 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 TEAD4Q15561 434 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 NBPF1Q3BBV0 1214 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 SLC9A9Q8IVB4 645 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 CNTNAP3BQ96NU0 1288 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 CNTNAP3Q9BZ76 1288 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 CRISPLD1Q9H336 500 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 ZDHHC3Q9NYG2 299 aa7.5□□□□□ -1.21
PDZRN3-206ENST00000477434 ATP4AP20648 1035 aa7.49□□□□□ -1.21
PDZRN3-206ENST00000477434 EFHC2Q5JST6 749 aa7.49□□□□□ -1.21
PDZRN3-206ENST00000477434 RNFT1Q5M7Z0 435 aa7.49□□□□□ -1.21
PDZRN3-206ENST00000477434 ANKMY2Q8IV38 441 aa7.49□□□□□ -1.21
PDZRN3-206ENST00000477434 ZSCAN1Q8NBB4 408 aa7.49□□□□□ -1.21
PDZRN3-206ENST00000477434 TSEN2Q8NCE0 465 aaKnown RBP7.49□□□□□ -1.21
PDZRN3-206ENST00000477434 GTPBP3Q969Y2 492 aaKnown RBP7.49□□□□□ -1.21
PDZRN3-206ENST00000477434 AIDAQ96BJ3 306 aa7.49□□□□□ -1.21
PDZRN3-206ENST00000477434 TRERF1Q96PN7 1200 aa7.49□□□□□ -1.21
PDZRN3-206ENST00000477434 RUBCNLQ9H714 662 aa7.49□□□□□ -1.21
PDZRN3-206ENST00000477434 THBS1P07996 1170 aa7.48□□□□□ -1.21
PDZRN3-206ENST00000477434 TATP17735 454 aaPredicted RBP7.48□□□□□ -1.21
PDZRN3-206ENST00000477434 RFX1P22670 979 aa7.48□□□□□ -1.21
PDZRN3-206ENST00000477434 LORP23490 312 aaPredicted RBP7.48□□□□□ -1.21
PDZRN3-206ENST00000477434 NOS2P35228 1153 aa7.48□□□□□ -1.21
PDZRN3-206ENST00000477434 DPYDQ12882 1025 aa7.48□□□□□ -1.21
PDZRN3-206ENST00000477434 CCDC97Q96F63 343 aaPredicted RBP7.48□□□□□ -1.21
PDZRN3-206ENST00000477434 SERPINA10Q9UK55 444 aa7.48□□□□□ -1.21
PDZRN3-206ENST00000477434 GPR25O00155 361 aa7.47□□□□□ -1.21
PDZRN3-206ENST00000477434 PSMA6P60900 246 aaKnown RBP7.47□□□□□ -1.21
PDZRN3-206ENST00000477434 GAS6Q14393 721 aa7.47□□□□□ -1.21
PDZRN3-206ENST00000477434 TBCELQ5QJ74 424 aa7.47□□□□□ -1.21
PDZRN3-206ENST00000477434 ERICH6Q7L0X2 663 aa7.47□□□□□ -1.21
PDZRN3-206ENST00000477434 ZDHHC1Q8WTX9 485 aa7.47□□□□□ -1.21
PDZRN3-206ENST00000477434 L3MBTL2Q969R5 705 aa7.47□□□□□ -1.21
PDZRN3-206ENST00000477434 CFHR5Q9BXR6 569 aa7.47□□□□□ -1.21
PDZRN3-206ENST00000477434 TSPAN10Q9H1Z9 355 aaPredicted RBP7.47□□□□□ -1.21
PDZRN3-206ENST00000477434 STK17AQ9UEE5 414 aa7.47□□□□□ -1.21
PDZRN3-206ENST00000477434 SERTM1A2A2V5 107 aa7.46□□□□□ -1.22
PDZRN3-206ENST00000477434 ARID3CA6NKF2 412 aa7.46□□□□□ -1.22
PDZRN3-206ENST00000477434 UBAP2LQ14157 1087 aaKnown RBP7.46□□□□□ -1.22
PDZRN3-206ENST00000477434 NLRP8Q86W28 1048 aa7.46□□□□□ -1.22
PDZRN3-206ENST00000477434 GAS2L2Q8NHY3 880 aa7.46□□□□□ -1.22
PDZRN3-206ENST00000477434 ARXQ96QS3 562 aa7.46□□□□□ -1.22
PDZRN3-206ENST00000477434 MBIPQ9NS73 344 aa7.46□□□□□ -1.22
PDZRN3-206ENST00000477434 PHF24Q9UPV7 400 aa7.46□□□□□ -1.22
PDZRN3-206ENST00000477434 CHMP3Q9Y3E7 222 aa7.46□□□□□ -1.22
PDZRN3-206ENST00000477434 PARP3Q9Y6F1 533 aa7.46□□□□□ -1.22
PDZRN3-206ENST00000477434 WIZO95785 1651 aa7.46□□□□□ -1.22
PDZRN3-206ENST00000477434 RIMBP3CA6NJZ7 1639 aa7.45□□□□□ -1.22
PDZRN3-206ENST00000477434 RIMBP3BA6NNM3 1639 aa7.45□□□□□ -1.22
PDZRN3-206ENST00000477434 RIMBP3Q9UFD9 1639 aa7.45□□□□□ -1.22
PDZRN3-206ENST00000477434 EML1O00423 815 aa7.45□□□□□ -1.22
PDZRN3-206ENST00000477434 SLURP2P0DP57 97 aa7.45□□□□□ -1.22
PDZRN3-206ENST00000477434 HIRAP54198 1017 aaPredicted RBP7.45□□□□□ -1.22
PDZRN3-206ENST00000477434 SRPK2P78362 688 aaKnown RBP7.45□□□□□ -1.22
PDZRN3-206ENST00000477434 SRSF11Q05519 484 aaKnown RBP7.45□□□□□ -1.22
PDZRN3-206ENST00000477434 ARSJQ5FYB0 599 aaPredicted RBP7.45□□□□□ -1.22
PDZRN3-206ENST00000477434 FIGNL1Q6PIW4 674 aa7.45□□□□□ -1.22
PDZRN3-206ENST00000477434 POTEAQ6S8J7 498 aa7.45□□□□□ -1.22
PDZRN3-206ENST00000477434 ZNF232Q9UNY5 417 aa7.45□□□□□ -1.22
PDZRN3-206ENST00000477434 A0A1W2PNR3 127 aa7.44□□□□□ -1.22
PDZRN3-206ENST00000477434 FAM181BA6NEQ2 426 aa7.44□□□□□ -1.22
PDZRN3-206ENST00000477434 C21orf2O43822 256 aa7.44□□□□□ -1.22
PDZRN3-206ENST00000477434 TXLNAP40222 546 aa7.44□□□□□ -1.22
PDZRN3-206ENST00000477434 CDCA8Q53HL2 280 aa7.44□□□□□ -1.22
PDZRN3-206ENST00000477434 STAG2Q8N3U4 1231 aa7.44□□□□□ -1.22
PDZRN3-206ENST00000477434 FAM200AQ8TCP9 573 aa7.44□□□□□ -1.22
PDZRN3-206ENST00000477434 HINFPQ9BQA5 517 aa7.44□□□□□ -1.22
PDZRN3-206ENST00000477434 GPC6Q9Y625 555 aaPredicted RBP7.44□□□□□ -1.22
PDZRN3-206ENST00000477434 LAMC3Q9Y6N6 1575 aa7.44□□□□□ -1.22
PDZRN3-206ENST00000477434 ATAD2Q6PL18 1390 aa7.44□□□□□ -1.22
PDZRN3-206ENST00000477434 PPP1R12BO60237 982 aaPredicted RBP7.43□□□□□ -1.22
PDZRN3-206ENST00000477434 ELOAQ14241 798 aaKnown RBP7.43□□□□□ -1.22
PDZRN3-206ENST00000477434 ZIC5Q96T25 663 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms