RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 DDX10Q13206 875 aaKnown RBP30.1■■■□□ 2.41
CNIH4-208ENST00000477413 RTF1Q92541 710 aaKnown RBP30.1■■■□□ 2.41
CNIH4-208ENST00000477413 FMNL2Q96PY5 1086 aa30.1■■■□□ 2.41
CNIH4-208ENST00000477413 SRP68Q9UHB9 627 aaKnown RBP30.1■■■□□ 2.41
CNIH4-208ENST00000477413 KDM3BQ7LBC6 1761 aa30.09■■■□□ 2.41
CNIH4-208ENST00000477413 MYBBP1AQ9BQG0 1328 aaKnown RBP30.08■■■□□ 2.41
CNIH4-208ENST00000477413 BTBD11A6QL63 1104 aa30.08■■■□□ 2.41
CNIH4-208ENST00000477413 FKBP8Q14318 412 aa30.08■■■□□ 2.41
CNIH4-208ENST00000477413 N4BP2Q86UW6 1770 aaPredicted RBP30.08■■■□□ 2.41
CNIH4-208ENST00000477413 NARFQ9UHQ1 456 aa30.07■■■□□ 2.4
CNIH4-208ENST00000477413 EIF5P55010 431 aaKnown RBP30.06■■■□□ 2.4
CNIH4-208ENST00000477413 TGFB2P61812 414 aa30.06■■■□□ 2.4
CNIH4-208ENST00000477413 MCM10Q7L590 875 aa30.06■■■□□ 2.4
CNIH4-208ENST00000477413 PNNQ9H307 717 aaKnown RBP30.06■■■□□ 2.4
CNIH4-208ENST00000477413 PARP3Q9Y6F1 533 aa30.06■■■□□ 2.4
CNIH4-208ENST00000477413 LAMB4A4D0S4 1761 aa30.05■■■□□ 2.4
CNIH4-208ENST00000477413 AFDNP55196 1824 aaKnown RBP30.05■■■□□ 2.4
CNIH4-208ENST00000477413 NEFMP07197 916 aa30.04■■■□□ 2.4
CNIH4-208ENST00000477413 TM4SF1P30408 202 aa30.04■■■□□ 2.4
CNIH4-208ENST00000477413 DDR1Q08345 913 aa30.04■■■□□ 2.4
CNIH4-208ENST00000477413 PELP1Q8IZL8 1130 aaKnown RBP30.04■■■□□ 2.4
CNIH4-208ENST00000477413 BCORQ6W2J9 1755 aa30.04■■■□□ 2.4
CNIH4-208ENST00000477413 ZPR1O75312 459 aa30.03■■■□□ 2.4
CNIH4-208ENST00000477413 POLRMTO00411 1230 aaKnown RBP30.02■■■□□ 2.4
CNIH4-208ENST00000477413 KCNQ3O43525 872 aa30.02■■■□□ 2.4
CNIH4-208ENST00000477413 NFE2L2Q16236 605 aa30.02■■■□□ 2.4
CNIH4-208ENST00000477413 USPL1Q5W0Q7 1092 aa30.02■■■□□ 2.4
CNIH4-208ENST00000477413 ZNF784Q8NCA9 323 aaPredicted RBP30.01■■■□□ 2.39
CNIH4-208ENST00000477413 BCL2L12Q9HB09 334 aa30.01■■■□□ 2.39
CNIH4-208ENST00000477413 IL6STP40189 918 aaPredicted RBP30■■■□□ 2.39
CNIH4-208ENST00000477413 DCTN1Q14203 1278 aa30■■■□□ 2.39
CNIH4-208ENST00000477413 ARFGEF1Q9Y6D6 1849 aa30■■■□□ 2.39
CNIH4-208ENST00000477413 A0A087WZG4 1122 aa29.99■■■□□ 2.39
CNIH4-208ENST00000477413 CANXP27824 592 aaKnown RBP29.98■■■□□ 2.39
CNIH4-208ENST00000477413 ZEB1P37275 1124 aaPredicted RBP29.98■■■□□ 2.39
CNIH4-208ENST00000477413 TAF7Q15545 349 aaPredicted RBP29.98■■■□□ 2.39
CNIH4-208ENST00000477413 DLEC1Q9Y238 1755 aa29.98■■■□□ 2.39
CNIH4-208ENST00000477413 MAPK8IP3Q9UPT6 1336 aa29.96■■■□□ 2.39
CNIH4-208ENST00000477413 ADCY9O60503 1353 aa29.96■■■□□ 2.39
CNIH4-208ENST00000477413 SNRPA1P09661 255 aaKnown RBP29.96■■■□□ 2.39
CNIH4-208ENST00000477413 NFIXQ14938 502 aa29.95■■■□□ 2.39
CNIH4-208ENST00000477413 PNISRQ8TF01 805 aaKnown RBP29.95■■■□□ 2.39
CNIH4-208ENST00000477413 PRKRIP1Q9H875 184 aaPredicted RBP29.94■■■□□ 2.38
CNIH4-208ENST00000477413 A1BGP04217 495 aa29.92■■■□□ 2.38
CNIH4-208ENST00000477413 KCNA3P22001 575 aa29.92■■■□□ 2.38
CNIH4-208ENST00000477413 USP16Q9Y5T5 823 aa29.92■■■□□ 2.38
CNIH4-208ENST00000477413 DPEP1P16444 411 aa29.91■■■□□ 2.38
CNIH4-208ENST00000477413 A0A0G2JLW4 131 aa29.9■■■□□ 2.38
CNIH4-208ENST00000477413 RGL2O15211 777 aa29.9■■■□□ 2.38
CNIH4-208ENST00000477413 PRAMEF22A3QJZ6 481 aa29.89■■■□□ 2.38
CNIH4-208ENST00000477413 ANKRD31Q8N7Z5 1873 aa29.87■■■□□ 2.37
CNIH4-208ENST00000477413 CAMTA2O94983 1202 aa29.87■■■□□ 2.37
CNIH4-208ENST00000477413 CARMIL3Q8ND23 1372 aa29.86■■■□□ 2.37
CNIH4-208ENST00000477413 SERPINB2P05120 415 aa29.85■■■□□ 2.37
CNIH4-208ENST00000477413 TMPOP42166 694 aaKnown RBP29.85■■■□□ 2.37
CNIH4-208ENST00000477413 BABAM1Q9NWV8 329 aa29.85■■■□□ 2.37
CNIH4-208ENST00000477413 EIF4A1P60842 406 aaKnown RBP29.84■■■□□ 2.37
CNIH4-208ENST00000477413 LMOD3Q0VAK6 560 aa29.84■■■□□ 2.37
CNIH4-208ENST00000477413 THUMPD2Q9BTF0 503 aaKnown RBP29.84■■■□□ 2.37
CNIH4-208ENST00000477413 TBC1D2BQ9UPU7 963 aa29.84■■■□□ 2.37
CNIH4-208ENST00000477413 NBPF26B4DH59 902 aa29.83■■■□□ 2.37
CNIH4-208ENST00000477413 GIGYF1O75420 1035 aaPredicted RBP29.83■■■□□ 2.37
CNIH4-208ENST00000477413 TBC1D9BQ66K14 1250 aa29.83■■■□□ 2.37
CNIH4-208ENST00000477413 NBPF10Q6P3W6 841 aaKnown RBP29.83■■■□□ 2.37
CNIH4-208ENST00000477413 NBPF15Q8N660 670 aa29.83■■■□□ 2.37
CNIH4-208ENST00000477413 MIS18AQ9NYP9 233 aa29.83■■■□□ 2.37
CNIH4-208ENST00000477413 PIM2Q9P1W9 311 aa29.83■■■□□ 2.37
CNIH4-208ENST00000477413 ATP10DQ9P241 1426 aa29.82■■■□□ 2.36
CNIH4-208ENST00000477413 CLEC4GQ6UXB4 293 aa29.82■■■□□ 2.36
CNIH4-208ENST00000477413 DZIP3Q86Y13 1208 aaKnown RBP29.82■■■□□ 2.36
CNIH4-208ENST00000477413 WWC3Q9ULE0 1092 aa29.82■■■□□ 2.36
CNIH4-208ENST00000477413 BCS1LQ9Y276 419 aa29.82■■■□□ 2.36
CNIH4-208ENST00000477413 RIPK4P57078 832 aa29.81■■■□□ 2.36
CNIH4-208ENST00000477413 NPM2Q86SE8 214 aaKnown RBP29.81■■■□□ 2.36
CNIH4-208ENST00000477413 COL11A2P13942 1736 aaPredicted RBP29.8■■■□□ 2.36
CNIH4-208ENST00000477413 RUNDC1Q96C34 613 aa29.8■■■□□ 2.36
CNIH4-208ENST00000477413 ZNF330Q9Y3S2 320 aaPredicted RBP29.8■■■□□ 2.36
CNIH4-208ENST00000477413 WDR43Q15061 677 aaKnown RBP eCLIP29.79■■■□□ 2.36
CNIH4-208ENST00000477413 ERBB4Q15303 1308 aa29.77■■■□□ 2.36
CNIH4-208ENST00000477413 CHRNA5P30532 468 aa29.77■■■□□ 2.36
CNIH4-208ENST00000477413 PIP4K2AP48426 406 aaPredicted RBP29.77■■■□□ 2.36
CNIH4-208ENST00000477413 DALRD3Q5D0E6 543 aaKnown RBP29.77■■■□□ 2.36
CNIH4-208ENST00000477413 ADAMTS8Q9UP79 889 aa29.76■■■□□ 2.35
CNIH4-208ENST00000477413 PDZRN3Q9UPQ7 1066 aa29.76■■■□□ 2.35
CNIH4-208ENST00000477413 PRR5LQ6MZQ0 368 aa29.75■■■□□ 2.35
CNIH4-208ENST00000477413 ZNF652Q9Y2D9 606 aa29.75■■■□□ 2.35
CNIH4-208ENST00000477413 ARFGEF2Q9Y6D5 1785 aa29.75■■■□□ 2.35
CNIH4-208ENST00000477413 BICDL1Q6ZP65 573 aa29.74■■■□□ 2.35
CNIH4-208ENST00000477413 SETDB2Q96T68 719 aa29.74■■■□□ 2.35
CNIH4-208ENST00000477413 TSPYL4Q9UJ04 414 aa29.74■■■□□ 2.35
CNIH4-208ENST00000477413 CCDC146Q8IYE0 955 aa29.73■■■□□ 2.35
CNIH4-208ENST00000477413 BRIP1Q9BX63 1249 aa29.73■■■□□ 2.35
CNIH4-208ENST00000477413 NUP98P52948 1817 aa29.73■■■□□ 2.35
CNIH4-208ENST00000477413 SBF1O95248 1867 aa29.72■■■□□ 2.35
CNIH4-208ENST00000477413 TRIM35Q9UPQ4 493 aa29.72■■■□□ 2.35
CNIH4-208ENST00000477413 CNBD1Q8NA66 436 aa29.7■■■□□ 2.35
CNIH4-208ENST00000477413 ERVV-1B6SEH8 477 aa29.68■■■□□ 2.34
CNIH4-208ENST00000477413 CHL1O00533 1208 aa29.68■■■□□ 2.34
CNIH4-208ENST00000477413 PDE6BP35913 854 aa29.68■■■□□ 2.34
CNIH4-208ENST00000477413 RRP7AQ9Y3A4 280 aaKnown RBP29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 210.3 ms