RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 RPGRIP1LQ68CZ1 1315 aa11.67□□□□□ -0.54
CHD6-207ENST00000476641 H3BM21 787 aa11.67□□□□□ -0.54
CHD6-207ENST00000476641 ATF3P18847 181 aa11.67□□□□□ -0.54
CHD6-207ENST00000476641 SPIRE2Q8WWL2 714 aa11.67□□□□□ -0.54
CHD6-207ENST00000476641 ZFP42Q96MM3 310 aa11.67□□□□□ -0.54
CHD6-207ENST00000476641 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.66□□□□□ -0.54
CHD6-207ENST00000476641 NDUFV2P19404 249 aa11.66□□□□□ -0.54
CHD6-207ENST00000476641 SSTR3P32745 418 aaPredicted RBP11.66□□□□□ -0.54
CHD6-207ENST00000476641 KCNH2Q12809 1159 aa11.66□□□□□ -0.54
CHD6-207ENST00000476641 PRR7Q8TB68 274 aa11.66□□□□□ -0.54
CHD6-207ENST00000476641 DDX17Q92841 729 aaKnown RBP11.66□□□□□ -0.54
CHD6-207ENST00000476641 NCOA3Q9Y6Q9 1424 aa11.66□□□□□ -0.54
CHD6-207ENST00000476641 SETD1AO15047 1707 aaKnown RBP11.66□□□□□ -0.54
CHD6-207ENST00000476641 PPLO60437 1756 aa11.65□□□□□ -0.54
CHD6-207ENST00000476641 LORP23490 312 aaPredicted RBP11.65□□□□□ -0.54
CHD6-207ENST00000476641 TMEM132EQ6IEE7 984 aa11.65□□□□□ -0.54
CHD6-207ENST00000476641 BRINP3Q76B58 766 aa11.65□□□□□ -0.54
CHD6-207ENST00000476641 ZNF511Q8NB15 262 aa11.65□□□□□ -0.54
CHD6-207ENST00000476641 STK26Q9P289 416 aa11.65□□□□□ -0.54
CHD6-207ENST00000476641 ERBB4Q15303 1308 aa11.64□□□□□ -0.55
CHD6-207ENST00000476641 MST1RQ04912 1400 aa11.64□□□□□ -0.55
CHD6-207ENST00000476641 ADGRL3Q9HAR2 1447 aa11.64□□□□□ -0.55
CHD6-207ENST00000476641 PLEKHG3A1L390 1219 aa11.64□□□□□ -0.55
CHD6-207ENST00000476641 MOXD2PA6NHM9 499 aa11.64□□□□□ -0.55
CHD6-207ENST00000476641 NNTQ13423 1086 aa11.64□□□□□ -0.55
CHD6-207ENST00000476641 RGS17Q9UGC6 210 aaPredicted RBP11.64□□□□□ -0.55
CHD6-207ENST00000476641 ASXL1Q8IXJ9 1541 aa11.64□□□□□ -0.55
CHD6-207ENST00000476641 ANKRD30BQ9BXX2 1392 aa11.64□□□□□ -0.55
CHD6-207ENST00000476641 VARSP26640 1264 aaKnown RBP11.63□□□□□ -0.55
CHD6-207ENST00000476641 PLEKHH1Q9ULM0 1364 aa11.63□□□□□ -0.55
CHD6-207ENST00000476641 PIK3C2GO75747 1445 aa11.62□□□□□ -0.55
CHD6-207ENST00000476641 PTCH1Q13635 1447 aa11.62□□□□□ -0.55
CHD6-207ENST00000476641 WAPLQ7Z5K2 1190 aa11.62□□□□□ -0.55
CHD6-207ENST00000476641 MTMR2Q13614 643 aa11.61□□□□□ -0.55
CHD6-207ENST00000476641 SCARF1Q14162 830 aa11.61□□□□□ -0.55
CHD6-207ENST00000476641 CFAP70Q5T0N1 1121 aa11.61□□□□□ -0.55
CHD6-207ENST00000476641 MRPL14Q6P1L8 145 aaKnown RBP11.61□□□□□ -0.55
CHD6-207ENST00000476641 MPNDQ8N594 471 aa11.61□□□□□ -0.55
CHD6-207ENST00000476641 DCCP43146 1447 aa11.6□□□□□ -0.55
CHD6-207ENST00000476641 COL16A1Q07092 1604 aaPredicted RBP11.6□□□□□ -0.55
CHD6-207ENST00000476641 NALCNQ8IZF0 1738 aa11.6□□□□□ -0.55
CHD6-207ENST00000476641 TTLL12Q14166 644 aaPredicted RBP11.6□□□□□ -0.55
CHD6-207ENST00000476641 PHLPP1O60346 1717 aa11.6□□□□□ -0.55
CHD6-207ENST00000476641 LRPPRCP42704 1394 aaKnown RBP11.59□□□□□ -0.55
CHD6-207ENST00000476641 SPDYE5A6NIY4 337 aa11.59□□□□□ -0.55
CHD6-207ENST00000476641 ADH1CP00326 375 aa11.59□□□□□ -0.55
CHD6-207ENST00000476641 TIMP2P16035 220 aa11.59□□□□□ -0.55
CHD6-207ENST00000476641 WDR4P57081 412 aaKnown RBP11.59□□□□□ -0.55
CHD6-207ENST00000476641 DESI1Q6ICB0 168 aa11.59□□□□□ -0.55
CHD6-207ENST00000476641 PURBQ96QR8 312 aaKnown RBP11.59□□□□□ -0.55
CHD6-207ENST00000476641 ORAI2Q96SN7 254 aa11.59□□□□□ -0.55
CHD6-207ENST00000476641 IFT172Q9UG01 1749 aa11.59□□□□□ -0.55
CHD6-207ENST00000476641 PRAG1Q86YV5 1406 aa11.59□□□□□ -0.55
CHD6-207ENST00000476641 C1orf167Q5SNV9 1468 aa11.58□□□□□ -0.56
CHD6-207ENST00000476641 JCADQ9P266 1359 aa11.58□□□□□ -0.56
CHD6-207ENST00000476641 LRP6O75581 1613 aa11.58□□□□□ -0.56
CHD6-207ENST00000476641 AHDC1Q5TGY3 1603 aaPredicted RBP11.58□□□□□ -0.56
CHD6-207ENST00000476641 C14orf93Q9H972 538 aaKnown RBP11.58□□□□□ -0.56
CHD6-207ENST00000476641 NRXN1Q9ULB1 1477 aa11.57□□□□□ -0.56
CHD6-207ENST00000476641 HRCP23327 699 aa11.57□□□□□ -0.56
CHD6-207ENST00000476641 CTHP32929 405 aa11.57□□□□□ -0.56
CHD6-207ENST00000476641 POTEAQ6S8J7 498 aa11.57□□□□□ -0.56
CHD6-207ENST00000476641 YTHDC2Q9H6S0 1430 aaKnown RBP11.57□□□□□ -0.56
CHD6-207ENST00000476641 MYOM2P54296 1465 aa11.57□□□□□ -0.56
CHD6-207ENST00000476641 DHX57Q6P158 1386 aaKnown RBP11.56□□□□□ -0.56
CHD6-207ENST00000476641 SOBPA7XYQ1 873 aa11.56□□□□□ -0.56
CHD6-207ENST00000476641 TECPR2O15040 1411 aa11.56□□□□□ -0.56
CHD6-207ENST00000476641 SAFB2Q14151 953 aaKnown RBP eCLIP11.56□□□□□ -0.56
CHD6-207ENST00000476641 FAM174AQ8TBP5 190 aa11.56□□□□□ -0.56
CHD6-207ENST00000476641 DCAF11Q8TEB1 546 aa11.56□□□□□ -0.56
CHD6-207ENST00000476641 ACIN1Q9UKV3 1341 aaKnown RBP11.56□□□□□ -0.56
CHD6-207ENST00000476641 ABCC11Q96J66 1382 aa11.55□□□□□ -0.56
CHD6-207ENST00000476641 NUTM2BA6NNL0 878 aaPredicted RBP11.55□□□□□ -0.56
CHD6-207ENST00000476641 NUTM2EB1AL46 878 aaPredicted RBP11.55□□□□□ -0.56
CHD6-207ENST00000476641 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.55□□□□□ -0.56
CHD6-207ENST00000476641 NUTM2AQ8IVF1 878 aaPredicted RBP11.55□□□□□ -0.56
CHD6-207ENST00000476641 XPCQ01831 940 aaPredicted RBP11.54□□□□□ -0.56
CHD6-207ENST00000476641 GIGYF2Q6Y7W6 1299 aaKnown RBP11.53□□□□□ -0.56
CHD6-207ENST00000476641 PRAM1Q96QH2 718 aa11.53□□□□□ -0.56
CHD6-207ENST00000476641 BEGAINQ9BUH8 593 aa11.53□□□□□ -0.56
CHD6-207ENST00000476641 KLF16Q9BXK1 252 aaPredicted RBP11.53□□□□□ -0.56
CHD6-207ENST00000476641 ARID5BQ14865 1188 aa11.52□□□□□ -0.57
CHD6-207ENST00000476641 AMHR2Q16671 573 aa11.52□□□□□ -0.57
CHD6-207ENST00000476641 ESCO1Q5FWF5 840 aa11.52□□□□□ -0.57
CHD6-207ENST00000476641 LYPD8Q6UX82 237 aa11.52□□□□□ -0.57
CHD6-207ENST00000476641 VSIG10Q8N0Z9 540 aa11.52□□□□□ -0.57
CHD6-207ENST00000476641 FOXJ1Q92949 421 aa11.52□□□□□ -0.57
CHD6-207ENST00000476641 TRAK1Q9UPV9 953 aa11.52□□□□□ -0.57
CHD6-207ENST00000476641 PNPLA6Q8IY17 1366 aa11.52□□□□□ -0.57
CHD6-207ENST00000476641 ADGRB1O14514 1584 aa11.51□□□□□ -0.57
CHD6-207ENST00000476641 NHSL1Q5SYE7 1610 aa11.51□□□□□ -0.57
CHD6-207ENST00000476641 MEX3CQ5U5Q3 659 aaKnown RBP11.51□□□□□ -0.57
CHD6-207ENST00000476641 SPATA31A6Q5VVP1 1343 aa11.51□□□□□ -0.57
CHD6-207ENST00000476641 CDC42BPGQ6DT37 1551 aa11.5□□□□□ -0.57
CHD6-207ENST00000476641 FOXO3O43524 673 aa11.5□□□□□ -0.57
CHD6-207ENST00000476641 VSIG8P0DPA2 414 aa11.5□□□□□ -0.57
CHD6-207ENST00000476641 CDK15Q96Q40 435 aa11.5□□□□□ -0.57
CHD6-207ENST00000476641 SIN3AQ96ST3 1273 aa11.5□□□□□ -0.57
CHD6-207ENST00000476641 HIRIP3Q9BW71 556 aaPredicted RBP11.5□□□□□ -0.57
CHD6-207ENST00000476641 TBC1D2Q9BYX2 928 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms