RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 TRIM11Q96F44 468 aa11.48□□□□□ -0.57
NUP58-209ENST00000476553 ZMYM1Q5SVZ6 1142 aa11.46□□□□□ -0.57
NUP58-209ENST00000476553 ATXN7O15265 892 aaPredicted RBP11.45□□□□□ -0.58
NUP58-209ENST00000476553 TNP2Q05952 138 aa11.45□□□□□ -0.58
NUP58-209ENST00000476553 PHTF2Q8N3S3 785 aa11.45□□□□□ -0.58
NUP58-209ENST00000476553 DOLKQ9UPQ8 538 aa11.45□□□□□ -0.58
NUP58-209ENST00000476553 DCDC2BA2VCK2 349 aa11.44□□□□□ -0.58
NUP58-209ENST00000476553 SPATA31C1P0DKV0 1188 aa11.44□□□□□ -0.58
NUP58-209ENST00000476553 MAPTP10636 758 aaKnown RBP11.44□□□□□ -0.58
NUP58-209ENST00000476553 SCNN1DP51172 638 aa11.44□□□□□ -0.58
NUP58-209ENST00000476553 CD33P20138 364 aa11.43□□□□□ -0.58
NUP58-209ENST00000476553 GATA4P43694 442 aa11.43□□□□□ -0.58
NUP58-209ENST00000476553 USP4Q13107 963 aa11.43□□□□□ -0.58
NUP58-209ENST00000476553 TSGA10IPQ3SY00 556 aa11.43□□□□□ -0.58
NUP58-209ENST00000476553 ZNF295-AS1Q8N0V1 137 aa11.43□□□□□ -0.58
NUP58-209ENST00000476553 RSPO4Q2I0M5 234 aaPredicted RBP11.42□□□□□ -0.58
NUP58-209ENST00000476553 CHIC2Q9UKJ5 165 aa11.42□□□□□ -0.58
NUP58-209ENST00000476553 FOXD4L6Q3SYB3 417 aaPredicted RBP11.41□□□□□ -0.58
NUP58-209ENST00000476553 ZNF468Q5VIY5 522 aaPredicted RBP11.41□□□□□ -0.58
NUP58-209ENST00000476553 FOXD4L3Q6VB84 417 aaPredicted RBP11.41□□□□□ -0.58
NUP58-209ENST00000476553 PLVAPQ9BX97 442 aa11.41□□□□□ -0.58
NUP58-209ENST00000476553 APBB1O00213 710 aa11.4□□□□□ -0.58
NUP58-209ENST00000476553 INHAP05111 366 aa11.4□□□□□ -0.58
NUP58-209ENST00000476553 FAM157BP0CG42 384 aa11.4□□□□□ -0.58
NUP58-209ENST00000476553 NIFKQ9BYG3 293 aaKnown RBP11.4□□□□□ -0.58
NUP58-209ENST00000476553 A0A1W2PNR3 127 aa11.39□□□□□ -0.59
NUP58-209ENST00000476553 NKAPLQ5M9Q1 402 aa11.39□□□□□ -0.59
NUP58-209ENST00000476553 KRTAP1-3Q8IUG1 177 aa11.39□□□□□ -0.59
NUP58-209ENST00000476553 MDFIQ99750 246 aa11.39□□□□□ -0.59
NUP58-209ENST00000476553 GDF10P55107 478 aa11.38□□□□□ -0.59
NUP58-209ENST00000476553 KHNYNO15037 678 aaKnown RBP11.37□□□□□ -0.59
NUP58-209ENST00000476553 PCBP4P57723 403 aaKnown RBP11.37□□□□□ -0.59
NUP58-209ENST00000476553 SNRKQ9NRH2 765 aa11.37□□□□□ -0.59
NUP58-209ENST00000476553 OXLD1Q5BKU9 147 aa11.36□□□□□ -0.59
NUP58-209ENST00000476553 SAMD5Q5TGI4 173 aa11.36□□□□□ -0.59
NUP58-209ENST00000476553 ZDHHC3Q9NYG2 299 aa11.36□□□□□ -0.59
NUP58-209ENST00000476553 EFSO43281 561 aa11.35□□□□□ -0.59
NUP58-209ENST00000476553 SMTNP53814 917 aa11.35□□□□□ -0.59
NUP58-209ENST00000476553 NBPF1Q3BBV0 1214 aa11.35□□□□□ -0.59
NUP58-209ENST00000476553 AIDAQ96BJ3 306 aa11.35□□□□□ -0.59
NUP58-209ENST00000476553 SIRT1Q96EB6 747 aa11.35□□□□□ -0.59
NUP58-209ENST00000476553 IQSEC3Q9UPP2 1182 aaPredicted RBP11.35□□□□□ -0.59
NUP58-209ENST00000476553 SLFNL1Q499Z3 407 aa11.34□□□□□ -0.59
NUP58-209ENST00000476553 ARSJQ5FYB0 599 aaPredicted RBP11.34□□□□□ -0.59
NUP58-209ENST00000476553 TPSG1Q9NRR2 321 aa11.34□□□□□ -0.59
NUP58-209ENST00000476553 ELOA3CA0A087WX78 387 aaPredicted RBP11.33□□□□□ -0.6
NUP58-209ENST00000476553 ELOA3DA6NLF2 546 aaPredicted RBP11.33□□□□□ -0.6
NUP58-209ENST00000476553 EIF4G2P78344 907 aaKnown RBP eCLIP11.33□□□□□ -0.6
NUP58-209ENST00000476553 ELOA3BQ3SY89 546 aa11.33□□□□□ -0.6
NUP58-209ENST00000476553 ELOA3Q8NG57 546 aa11.33□□□□□ -0.6
NUP58-209ENST00000476553 ZIC5Q96T25 663 aa11.33□□□□□ -0.6
NUP58-209ENST00000476553 KRTAP4-12Q9BQ66 201 aa11.33□□□□□ -0.6
NUP58-209ENST00000476553 STRN4Q9NRL3 753 aa11.33□□□□□ -0.6
NUP58-209ENST00000476553 DYRK3O43781 588 aa11.32□□□□□ -0.6
NUP58-209ENST00000476553 LAMC2Q13753 1193 aa11.32□□□□□ -0.6
NUP58-209ENST00000476553 MTFR1Q15390 333 aa11.32□□□□□ -0.6
NUP58-209ENST00000476553 IL27Q8NEV9 243 aa11.32□□□□□ -0.6
NUP58-209ENST00000476553 SCO2A0A1W2PP80 73 aa11.31□□□□□ -0.6
NUP58-209ENST00000476553 SPDYE3A6NKU9 549 aa11.31□□□□□ -0.6
NUP58-209ENST00000476553 TATP17735 454 aaPredicted RBP11.31□□□□□ -0.6
NUP58-209ENST00000476553 SLC4A9Q96Q91 983 aa11.31□□□□□ -0.6
NUP58-209ENST00000476553 MARK1Q9P0L2 795 aa11.31□□□□□ -0.6
NUP58-209ENST00000476553 PRR12Q9ULL5 1215 aa11.31□□□□□ -0.6
NUP58-209ENST00000476553 USP3Q9Y6I4 520 aa11.31□□□□□ -0.6
NUP58-209ENST00000476553 TBC1D2BQ9UPU7 963 aa11.3□□□□□ -0.6
NUP58-209ENST00000476553 IRF5Q13568 498 aa11.29□□□□□ -0.6
NUP58-209ENST00000476553 COL9A3Q14050 684 aaPredicted RBP11.29□□□□□ -0.6
NUP58-209ENST00000476553 PRRT3Q5FWE3 981 aa11.29□□□□□ -0.6
NUP58-209ENST00000476553 TMEM229AB2RXF0 380 aa11.28□□□□□ -0.6
NUP58-209ENST00000476553 CDK2AP1O14519 115 aa11.28□□□□□ -0.6
NUP58-209ENST00000476553 ARTNQ5T4W7 220 aa11.28□□□□□ -0.6
NUP58-209ENST00000476553 PRDM6Q9NQX0 595 aa11.28□□□□□ -0.6
NUP58-209ENST00000476553 A6NJY4 79 aa11.27□□□□□ -0.61
NUP58-209ENST00000476553 ADARB2-AS1A8MUL3 147 aa11.26□□□□□ -0.61
NUP58-209ENST00000476553 SIN3BO75182 1162 aa11.26□□□□□ -0.61
NUP58-209ENST00000476553 APBA3O96018 575 aa11.26□□□□□ -0.61
NUP58-209ENST00000476553 LCE3BQ5TA77 95 aa11.26□□□□□ -0.61
NUP58-209ENST00000476553 SYT9Q86SS6 491 aa11.26□□□□□ -0.61
NUP58-209ENST00000476553 ZFP64Q9NPA5 681 aa11.26□□□□□ -0.61
NUP58-209ENST00000476553 GJA3Q9Y6H8 435 aa11.26□□□□□ -0.61
NUP58-209ENST00000476553 MAP7D1Q3KQU3 841 aa11.25□□□□□ -0.61
NUP58-209ENST00000476553 SERTAD1Q9UHV2 236 aa11.25□□□□□ -0.61
NUP58-209ENST00000476553 ALAS2P22557 587 aa11.24□□□□□ -0.61
NUP58-209ENST00000476553 NEUROD2Q15784 382 aa11.24□□□□□ -0.61
NUP58-209ENST00000476553 PLPP7Q8NBV4 271 aa11.23□□□□□ -0.61
NUP58-209ENST00000476553 CABP1Q9NZU7 370 aa11.23□□□□□ -0.61
NUP58-209ENST00000476553 FAM229AH3BQW9 127 aa11.22□□□□□ -0.61
NUP58-209ENST00000476553 M0R082 166 aa11.22□□□□□ -0.61
NUP58-209ENST00000476553 PRSS36Q5K4E3 855 aa11.22□□□□□ -0.61
NUP58-209ENST00000476553 ZNF417Q8TAU3 575 aa11.22□□□□□ -0.61
NUP58-209ENST00000476553 TNFRSF25Q93038 417 aa11.22□□□□□ -0.61
NUP58-209ENST00000476553 NACC1Q96RE7 527 aa11.22□□□□□ -0.61
NUP58-209ENST00000476553 ZNF587Q96SQ5 575 aaPredicted RBP11.22□□□□□ -0.61
NUP58-209ENST00000476553 STARD13Q9Y3M8 1113 aa11.22□□□□□ -0.61
NUP58-209ENST00000476553 TXLNAP40222 546 aa11.21□□□□□ -0.61
NUP58-209ENST00000476553 BICDL1Q6ZP65 573 aa11.21□□□□□ -0.61
NUP58-209ENST00000476553 ALBP02768 609 aa11.2□□□□□ -0.62
NUP58-209ENST00000476553 NID1P14543 1247 aa11.2□□□□□ -0.62
NUP58-209ENST00000476553 PRKCSHP14314 528 aaPredicted RBP11.19□□□□□ -0.62
NUP58-209ENST00000476553 ZDHHC1Q8WTX9 485 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms