RNA–Protein interactions for RNA: ENST00000476126.1

SP140-209, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 463 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-209ENST00000476126 WWC3Q9ULE0 1092 aa9.21□□□□□ -0.94
SP140-209ENST00000476126 ZNF330Q9Y3S2 320 aaPredicted RBP9.21□□□□□ -0.94
SP140-209ENST00000476126 HEG1Q9ULI3 1381 aa9.21□□□□□ -0.94
SP140-209ENST00000476126 NUP98P52948 1817 aa9.2□□□□□ -0.94
SP140-209ENST00000476126 ANKRD31Q8N7Z5 1873 aa9.2□□□□□ -0.94
SP140-209ENST00000476126 BTBD11A6QL63 1104 aa9.2□□□□□ -0.94
SP140-209ENST00000476126 ZPR1O75312 459 aa9.2□□□□□ -0.94
SP140-209ENST00000476126 GYS1P13807 737 aa9.2□□□□□ -0.94
SP140-209ENST00000476126 RALBP1Q15311 655 aa9.2□□□□□ -0.94
SP140-209ENST00000476126 ZNF790Q6PG37 636 aa9.2□□□□□ -0.94
SP140-209ENST00000476126 MCM10Q7L590 875 aa9.2□□□□□ -0.94
SP140-209ENST00000476126 NPM2Q86SE8 214 aaKnown RBP9.2□□□□□ -0.94
SP140-209ENST00000476126 VSIG10Q8N0Z9 540 aa9.2□□□□□ -0.94
SP140-209ENST00000476126 IL17REQ8NFR9 667 aa9.2□□□□□ -0.94
SP140-209ENST00000476126 SRP68Q9UHB9 627 aaKnown RBP9.2□□□□□ -0.94
SP140-209ENST00000476126 PARP3Q9Y6F1 533 aa9.2□□□□□ -0.94
SP140-209ENST00000476126 USP42Q9H9J4 1324 aaKnown RBP9.2□□□□□ -0.94
SP140-209ENST00000476126 CEMIPQ8WUJ3 1361 aa9.2□□□□□ -0.94
SP140-209ENST00000476126 C10orf71Q711Q0 1435 aa9.2□□□□□ -0.94
SP140-209ENST00000476126 ZBTB22O15209 634 aa9.19□□□□□ -0.94
SP140-209ENST00000476126 STARD3NLO95772 234 aa9.19□□□□□ -0.94
SP140-209ENST00000476126 CYP19A1P11511 503 aaPredicted RBP9.19□□□□□ -0.94
SP140-209ENST00000476126 CANXP27824 592 aaKnown RBP9.19□□□□□ -0.94
SP140-209ENST00000476126 INTS5Q6P9B9 1019 aaKnown RBP9.19□□□□□ -0.94
SP140-209ENST00000476126 FMNL2Q96PY5 1086 aa9.19□□□□□ -0.94
SP140-209ENST00000476126 PNNQ9H307 717 aaKnown RBP9.19□□□□□ -0.94
SP140-209ENST00000476126 ZBTB1Q9Y2K1 713 aa9.19□□□□□ -0.94
SP140-209ENST00000476126 SOS1Q07889 1333 aaPredicted RBP9.19□□□□□ -0.94
SP140-209ENST00000476126 MYBBP1AQ9BQG0 1328 aaKnown RBP9.19□□□□□ -0.94
SP140-209ENST00000476126 PXDNLA1KZ92 1463 aa9.19□□□□□ -0.94
SP140-209ENST00000476126 GOLGB1Q14789 3259 aaKnown RBP9.19□□□□□ -0.94
SP140-209ENST00000476126 GRIN3BO60391 1043 aa9.18□□□□□ -0.94
SP140-209ENST00000476126 SBF1O95248 1867 aa9.18□□□□□ -0.94
SP140-209ENST00000476126 COL11A2P13942 1736 aaPredicted RBP9.18□□□□□ -0.94
SP140-209ENST00000476126 YBX3P16989 372 aaKnown RBP eCLIP9.18□□□□□ -0.94
SP140-209ENST00000476126 ZEB1P37275 1124 aaPredicted RBP9.18□□□□□ -0.94
SP140-209ENST00000476126 DCTN1Q14203 1278 aa9.18□□□□□ -0.94
SP140-209ENST00000476126 ANKRD36CQ5JPF3 1778 aa9.18□□□□□ -0.94
SP140-209ENST00000476126 USPL1Q5W0Q7 1092 aa9.18□□□□□ -0.94
SP140-209ENST00000476126 ZNF496Q96IT1 587 aaPredicted RBP9.18□□□□□ -0.94
SP140-209ENST00000476126 TEX13AQ9BXU3 409 aaPredicted RBP9.18□□□□□ -0.94
SP140-209ENST00000476126 ARFGEF2Q9Y6D5 1785 aa9.18□□□□□ -0.94
SP140-209ENST00000476126 FKBP8Q14318 412 aa9.17□□□□□ -0.94
SP140-209ENST00000476126 TIAM2Q8IVF5 1701 aa9.17□□□□□ -0.94
SP140-209ENST00000476126 A0A087WZG4 1122 aa9.16□□□□□ -0.94
SP140-209ENST00000476126 HTATSF1O43719 755 aaKnown RBP9.16□□□□□ -0.94
SP140-209ENST00000476126 WDR43Q15061 677 aaKnown RBP eCLIP9.16□□□□□ -0.94
SP140-209ENST00000476126 NFE2L2Q16236 605 aa9.16□□□□□ -0.94
SP140-209ENST00000476126 RNF216Q9NWF9 866 aaPredicted RBP9.16□□□□□ -0.94
SP140-209ENST00000476126 NARFQ9UHQ1 456 aa9.16□□□□□ -0.94
SP140-209ENST00000476126 UTRNP46939 3433 aa9.15□□□□□ -0.94
SP140-209ENST00000476126 KCNQ3O43525 872 aa9.15□□□□□ -0.94
SP140-209ENST00000476126 BCS1LQ9Y276 419 aa9.15□□□□□ -0.94
SP140-209ENST00000476126 DICER1Q9UPY3 1922 aaKnown RBP9.14□□□□□ -0.95
SP140-209ENST00000476126 A0A0G2JLW4 131 aa9.14□□□□□ -0.95
SP140-209ENST00000476126 NPHP1O15259 732 aa9.14□□□□□ -0.95
SP140-209ENST00000476126 SNRPA1P09661 255 aaKnown RBP9.14□□□□□ -0.95
SP140-209ENST00000476126 IL6STP40189 918 aaPredicted RBP9.14□□□□□ -0.95
SP140-209ENST00000476126 TGFB2P61812 414 aa9.14□□□□□ -0.95
SP140-209ENST00000476126 DDR1Q08345 913 aa9.14□□□□□ -0.95
SP140-209ENST00000476126 TAF7Q15545 349 aaPredicted RBP9.14□□□□□ -0.95
SP140-209ENST00000476126 BICDL1Q6ZP65 573 aa9.14□□□□□ -0.95
SP140-209ENST00000476126 ZNF784Q8NCA9 323 aaPredicted RBP9.14□□□□□ -0.95
SP140-209ENST00000476126 PNISRQ8TF01 805 aaKnown RBP9.14□□□□□ -0.95
SP140-209ENST00000476126 PLEKHF1Q96S99 279 aa9.14□□□□□ -0.95
SP140-209ENST00000476126 POLRMTO00411 1230 aaKnown RBP9.13□□□□□ -0.95
SP140-209ENST00000476126 A1BGP04217 495 aa9.13□□□□□ -0.95
SP140-209ENST00000476126 DPEP1P16444 411 aa9.13□□□□□ -0.95
SP140-209ENST00000476126 PIP4K2AP48426 406 aaPredicted RBP9.13□□□□□ -0.95
SP140-209ENST00000476126 EIF5P55010 431 aaKnown RBP9.13□□□□□ -0.95
SP140-209ENST00000476126 LMOD3Q0VAK6 560 aa9.13□□□□□ -0.95
SP140-209ENST00000476126 CCDC146Q8IYE0 955 aa9.13□□□□□ -0.95
SP140-209ENST00000476126 THUMPD2Q9BTF0 503 aaKnown RBP9.13□□□□□ -0.95
SP140-209ENST00000476126 MIS18AQ9NYP9 233 aa9.13□□□□□ -0.95
SP140-209ENST00000476126 TBC1D2BQ9UPU7 963 aa9.13□□□□□ -0.95
SP140-209ENST00000476126 CARMIL3Q8ND23 1372 aa9.12□□□□□ -0.95
SP140-209ENST00000476126 PRAMEF22A3QJZ6 481 aa9.12□□□□□ -0.95
SP140-209ENST00000476126 SERPINB2P05120 415 aa9.12□□□□□ -0.95
SP140-209ENST00000476126 RIPK4P57078 832 aa9.12□□□□□ -0.95
SP140-209ENST00000476126 NFIXQ14938 502 aa9.12□□□□□ -0.95
SP140-209ENST00000476126 NEUROD2Q15784 382 aa9.12□□□□□ -0.95
SP140-209ENST00000476126 DZIP3Q86Y13 1208 aaKnown RBP9.12□□□□□ -0.95
SP140-209ENST00000476126 PRKRIP1Q9H875 184 aaPredicted RBP9.12□□□□□ -0.95
SP140-209ENST00000476126 USP16Q9Y5T5 823 aa9.12□□□□□ -0.95
SP140-209ENST00000476126 TNRC6CQ9HCJ0 1690 aaKnown RBP9.12□□□□□ -0.95
SP140-209ENST00000476126 FER1L6Q2WGJ9 1857 aa9.12□□□□□ -0.95
SP140-209ENST00000476126 ATP10DQ9P241 1426 aa9.12□□□□□ -0.95
SP140-209ENST00000476126 TM4SF1P30408 202 aa9.11□□□□□ -0.95
SP140-209ENST00000476126 BCL2L12Q9HB09 334 aa9.11□□□□□ -0.95
SP140-209ENST00000476126 PIM2Q9P1W9 311 aa9.11□□□□□ -0.95
SP140-209ENST00000476126 TSPYL4Q9UJ04 414 aa9.11□□□□□ -0.95
SP140-209ENST00000476126 ZNF652Q9Y2D9 606 aa9.11□□□□□ -0.95
SP140-209ENST00000476126 RRP7AQ9Y3A4 280 aaKnown RBP9.11□□□□□ -0.95
SP140-209ENST00000476126 LAMB2P55268 1798 aa9.11□□□□□ -0.95
SP140-209ENST00000476126 CHRNA5P30532 468 aa9.1□□□□□ -0.95
SP140-209ENST00000476126 TMPOP42166 694 aaKnown RBP9.1□□□□□ -0.95
SP140-209ENST00000476126 TBC1D9BQ66K14 1250 aa9.1□□□□□ -0.95
SP140-209ENST00000476126 ARHGAP27Q6ZUM4 889 aa9.1□□□□□ -0.95
SP140-209ENST00000476126 RUNDC1Q96C34 613 aa9.1□□□□□ -0.95
SP140-209ENST00000476126 RTN4Q9NQC3 1192 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms