RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 OVOS2A0A0G2JMS6 1433 aa8.64□□□□□ -1.03
UBR4-212ENST00000475973 OVOS2A0A0J9YW53 1432 aa8.64□□□□□ -1.03
UBR4-212ENST00000475973 OVOS2Q6IE36 1432 aa8.64□□□□□ -1.03
UBR4-212ENST00000475973 WDR17Q8IZU2 1322 aa8.64□□□□□ -1.03
UBR4-212ENST00000475973 KIF16BQ96L93 1317 aa8.64□□□□□ -1.03
UBR4-212ENST00000475973 TRIM37O94972 964 aa8.64□□□□□ -1.03
UBR4-212ENST00000475973 EN1Q05925 392 aaPredicted RBP8.64□□□□□ -1.03
UBR4-212ENST00000475973 EXOSC9Q06265 439 aaKnown RBP8.64□□□□□ -1.03
UBR4-212ENST00000475973 CDCA7Q9BWT1 371 aaPredicted RBP8.64□□□□□ -1.03
UBR4-212ENST00000475973 PNNQ9H307 717 aaKnown RBP8.64□□□□□ -1.03
UBR4-212ENST00000475973 BMP2KQ9NSY1 1161 aaPredicted RBP8.64□□□□□ -1.03
UBR4-212ENST00000475973 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.64□□□□□ -1.036e-10■■□□□ 11.6
UBR4-212ENST00000475973 DAXXQ9UER7 740 aaPredicted RBP8.64□□□□□ -1.03
UBR4-212ENST00000475973 RRP7AQ9Y3A4 280 aaKnown RBP8.64□□□□□ -1.03
UBR4-212ENST00000475973 ABCC6O95255 1503 aa8.64□□□□□ -1.03
UBR4-212ENST00000475973 EDC4Q6P2E9 1401 aaKnown RBP8.63□□□□□ -1.03
UBR4-212ENST00000475973 PIK3C2AO00443 1686 aa8.63□□□□□ -1.03
UBR4-212ENST00000475973 APBA3O96018 575 aa8.63□□□□□ -1.03
UBR4-212ENST00000475973 MCM4P33991 863 aa8.63□□□□□ -1.03
UBR4-212ENST00000475973 DDB1Q16531 1140 aa8.63□□□□□ -1.03
UBR4-212ENST00000475973 ARHGEF25Q86VW2 580 aa8.63□□□□□ -1.03
UBR4-212ENST00000475973 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.63□□□□□ -1.03
UBR4-212ENST00000475973 KIF2CQ99661 725 aa8.63□□□□□ -1.03
UBR4-212ENST00000475973 RSPH6AQ9H0K4 717 aa8.63□□□□□ -1.03
UBR4-212ENST00000475973 CHMP5Q9NZZ3 219 aa8.63□□□□□ -1.03
UBR4-212ENST00000475973 RGPD1P0DJD0 1748 aa8.63□□□□□ -1.03
UBR4-212ENST00000475973 USP31Q70CQ4 1352 aa8.62□□□□□ -1.03
UBR4-212ENST00000475973 BRWD3Q6RI45 1802 aa8.62□□□□□ -1.03
UBR4-212ENST00000475973 KIF20BQ96Q89 1820 aa8.62□□□□□ -1.03
UBR4-212ENST00000475973 ZBTB7BO15156 539 aaPredicted RBP8.62□□□□□ -1.03
UBR4-212ENST00000475973 U2AF1L5P0DN76 240 aaPredicted RBP8.62□□□□□ -1.03
UBR4-212ENST00000475973 U2AF1Q01081 240 aaKnown RBP eCLIP8.62□□□□□ -1.03
UBR4-212ENST00000475973 BMP2KLQ5H9B9 411 aa8.62□□□□□ -1.03
UBR4-212ENST00000475973 ZC3H15Q8WU90 426 aaKnown RBP8.62□□□□□ -1.03
UBR4-212ENST00000475973 C22orf23Q9BZE7 217 aa8.62□□□□□ -1.03
UBR4-212ENST00000475973 ABCC4O15439 1325 aa8.61□□□□□ -1.03
UBR4-212ENST00000475973 NFAT5O94916 1531 aa8.61□□□□□ -1.03
UBR4-212ENST00000475973 PSDA5PKW4 1024 aaPredicted RBP8.61□□□□□ -1.03
UBR4-212ENST00000475973 IPO8O15397 1037 aaKnown RBP8.61□□□□□ -1.03
UBR4-212ENST00000475973 VAMP4O75379 141 aa8.61□□□□□ -1.03
UBR4-212ENST00000475973 CLCN6P51797 869 aa8.61□□□□□ -1.03
UBR4-212ENST00000475973 EZH2Q15910 746 aaKnown RBP8.61□□□□□ -1.03
UBR4-212ENST00000475973 L1TD1Q5T7N2 865 aaKnown RBP8.61□□□□□ -1.03
UBR4-212ENST00000475973 SMYD5Q6GMV2 418 aa8.61□□□□□ -1.03
UBR4-212ENST00000475973 TMEM57Q8N5G2 664 aa8.61□□□□□ -1.03
UBR4-212ENST00000475973 MRPL50Q8N5N7 158 aaKnown RBP8.61□□□□□ -1.03
UBR4-212ENST00000475973 UPF2Q9HAU5 1272 aaKnown RBP8.61□□□□□ -1.03
UBR4-212ENST00000475973 GPHNQ9NQX3 736 aaPredicted RBP8.61□□□□□ -1.03
UBR4-212ENST00000475973 GALR2O43603 387 aaPredicted RBP8.6□□□□□ -1.03
UBR4-212ENST00000475973 DIAPH1O60610 1272 aaKnown RBP8.6□□□□□ -1.03
UBR4-212ENST00000475973 CANXP27824 592 aaKnown RBP8.6□□□□□ -1.03
UBR4-212ENST00000475973 NME9Q86XW9 330 aa8.6□□□□□ -1.03
UBR4-212ENST00000475973 TSR2Q969E8 191 aaKnown RBP8.6□□□□□ -1.03
UBR4-212ENST00000475973 GCC1Q96CN9 775 aa8.6□□□□□ -1.03
UBR4-212ENST00000475973 CAMKK2Q96RR4 588 aa8.6□□□□□ -1.03
UBR4-212ENST00000475973 CARD10Q9BWT7 1032 aa8.6□□□□□ -1.03
UBR4-212ENST00000475973 ANO8Q9HCE9 1232 aaPredicted RBP8.6□□□□□ -1.03
UBR4-212ENST00000475973 POLKQ9UBT6 870 aa8.6□□□□□ -1.03
UBR4-212ENST00000475973 NOB1Q9ULX3 412 aaKnown RBP8.6□□□□□ -1.03
UBR4-212ENST00000475973 ERBB3P21860 1342 aa8.59□□□□□ -1.03
UBR4-212ENST00000475973 XRCC6P12956 609 aaKnown RBP eCLIP8.59□□□□□ -1.03
UBR4-212ENST00000475973 IL13P35225 146 aa8.59□□□□□ -1.03
UBR4-212ENST00000475973 R3HDM1Q15032 1099 aaKnown RBP8.59□□□□□ -1.03
UBR4-212ENST00000475973 TMEM132AQ24JP5 1023 aa8.59□□□□□ -1.03
UBR4-212ENST00000475973 NBPF14Q5TI25 921 aa8.59□□□□□ -1.03
UBR4-212ENST00000475973 CHMP4BQ9H444 224 aaKnown RBP8.59□□□□□ -1.03
UBR4-212ENST00000475973 SMC4Q9NTJ3 1288 aa8.59□□□□□ -1.03
UBR4-212ENST00000475973 IFT57Q9NWB7 429 aa8.59□□□□□ -1.03
UBR4-212ENST00000475973 AXIN2Q9Y2T1 843 aa8.59□□□□□ -1.03
UBR4-212ENST00000475973 TNS2Q63HR2 1409 aa8.59□□□□□ -1.03
UBR4-212ENST00000475973 AKAP12Q02952 1782 aa8.58□□□□□ -1.04
UBR4-212ENST00000475973 LRRC37A3O60309 1634 aa8.58□□□□□ -1.04
UBR4-212ENST00000475973 LRP5O75197 1615 aa8.58□□□□□ -1.04
UBR4-212ENST00000475973 MON2Q7Z3U7 1717 aa8.58□□□□□ -1.04
UBR4-212ENST00000475973 TNS1Q9HBL0 1735 aaKnown RBP8.58□□□□□ -1.04
UBR4-212ENST00000475973 PARP4Q9UKK3 1724 aaKnown RBP8.58□□□□□ -1.04
UBR4-212ENST00000475973 BCL9O00512 1426 aa8.58□□□□□ -1.04
UBR4-212ENST00000475973 RIPK4P57078 832 aa8.58□□□□□ -1.04
UBR4-212ENST00000475973 NEUROD2Q15784 382 aa8.58□□□□□ -1.04
UBR4-212ENST00000475973 NFE2L2Q16236 605 aa8.58□□□□□ -1.04
UBR4-212ENST00000475973 CHD1LQ86WJ1 897 aa8.58□□□□□ -1.04
UBR4-212ENST00000475973 SIRT2Q8IXJ6 389 aa8.58□□□□□ -1.04
UBR4-212ENST00000475973 COG3Q96JB2 828 aa8.58□□□□□ -1.04
UBR4-212ENST00000475973 BCL2L13Q9BXK5 485 aa8.58□□□□□ -1.04
UBR4-212ENST00000475973 GGNBP2Q9H3C7 697 aa8.58□□□□□ -1.04
UBR4-212ENST00000475973 NLRP2Q9NX02 1062 aa8.58□□□□□ -1.04
UBR4-212ENST00000475973 IBTKQ9P2D0 1353 aaPredicted RBP8.58□□□□□ -1.04
UBR4-212ENST00000475973 SRCAPQ6ZRS2 3230 aa8.57□□□□□ -1.04
UBR4-212ENST00000475973 EXOC5O00471 708 aa8.57□□□□□ -1.04
UBR4-212ENST00000475973 TNNT2P45379 298 aaPredicted RBP8.57□□□□□ -1.04
UBR4-212ENST00000475973 PPP1R15BQ5SWA1 713 aa8.57□□□□□ -1.04
UBR4-212ENST00000475973 DPY19L2Q6NUT2 758 aa8.57□□□□□ -1.04
UBR4-212ENST00000475973 ANKRD24Q8TF21 1146 aa8.57□□□□□ -1.04
UBR4-212ENST00000475973 IL17RAQ96F46 866 aa8.57□□□□□ -1.04
UBR4-212ENST00000475973 IL2RBP14784 551 aa8.56□□□□□ -1.04
UBR4-212ENST00000475973 CALD1Q05682 793 aaKnown RBP8.56□□□□□ -1.04
UBR4-212ENST00000475973 RAB3GAP1Q15042 981 aa8.56□□□□□ -1.04
UBR4-212ENST00000475973 FTSJ3Q8IY81 847 aaKnown RBP8.56□□□□□ -1.04
UBR4-212ENST00000475973 RRAGDQ9NQL2 400 aaPredicted RBP8.56□□□□□ -1.04
UBR4-212ENST00000475973 RTL1A6NKG5 1358 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms