RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 TM4SF1P30408 202 aa16.83■□□□□ 0.28
CCDC57-208ENST00000475635 CHRNA5P30532 468 aa16.83■□□□□ 0.28
CCDC57-208ENST00000475635 MTHFSDQ2M296 383 aaKnown RBP16.83■□□□□ 0.28
CCDC57-208ENST00000475635 C9orf131Q5VYM1 1079 aa16.83■□□□□ 0.28
CCDC57-208ENST00000475635 NMRK2Q9NPI5 230 aa16.83■□□□□ 0.28
CCDC57-208ENST00000475635 TNRC6CQ9HCJ0 1690 aaKnown RBP16.82■□□□□ 0.28
CCDC57-208ENST00000475635 DIAPH1O60610 1272 aaKnown RBP16.82■□□□□ 0.28
CCDC57-208ENST00000475635 CC2D1BQ5T0F9 858 aaKnown RBP16.82■□□□□ 0.28
CCDC57-208ENST00000475635 IFFO2Q5TF58 517 aa16.82■□□□□ 0.28
CCDC57-208ENST00000475635 WDR90Q96KV7 1748 aa16.82■□□□□ 0.28
CCDC57-208ENST00000475635 COL15A1P39059 1388 aa16.81■□□□□ 0.28
CCDC57-208ENST00000475635 PER1O15534 1290 aaPredicted RBP16.81■□□□□ 0.28
CCDC57-208ENST00000475635 ZBTB1Q9Y2K1 713 aa16.81■□□□□ 0.28
CCDC57-208ENST00000475635 APLP1P51693 650 aa16.8■□□□□ 0.28
CCDC57-208ENST00000475635 NARFQ9UHQ1 456 aa16.8■□□□□ 0.28
CCDC57-208ENST00000475635 ANKRD31Q8N7Z5 1873 aa16.8■□□□□ 0.28
CCDC57-208ENST00000475635 NFIXQ14938 502 aa16.79■□□□□ 0.28
CCDC57-208ENST00000475635 VSIG10Q8N0Z9 540 aa16.79■□□□□ 0.28
CCDC57-208ENST00000475635 RNF181Q9P0P0 153 aa16.79■□□□□ 0.28
CCDC57-208ENST00000475635 COL3A1P02461 1466 aaPredicted RBP16.79■□□□□ 0.28
CCDC57-208ENST00000475635 CACNA1SQ13698 1873 aa16.78■□□□□ 0.28
CCDC57-208ENST00000475635 TIAM2Q8IVF5 1701 aa16.78■□□□□ 0.28
CCDC57-208ENST00000475635 SCN7AQ01118 1682 aa16.78■□□□□ 0.28
CCDC57-208ENST00000475635 DICER1Q9UPY3 1922 aaKnown RBP16.77■□□□□ 0.28
CCDC57-208ENST00000475635 BCL2L12Q9HB09 334 aa16.77■□□□□ 0.28
CCDC57-208ENST00000475635 KDM2BQ8NHM5 1336 aa16.76■□□□□ 0.27
CCDC57-208ENST00000475635 CANXP27824 592 aaKnown RBP16.76■□□□□ 0.27
CCDC57-208ENST00000475635 CNGB1Q14028 1251 aaPredicted RBP16.76■□□□□ 0.27
CCDC57-208ENST00000475635 C16orf71Q8IYS4 520 aaPredicted RBP16.76■□□□□ 0.27
CCDC57-208ENST00000475635 TTC5Q8N0Z6 440 aa16.76■□□□□ 0.27
CCDC57-208ENST00000475635 RBM46Q8TBY0 533 aaKnown RBP16.76■□□□□ 0.27
CCDC57-208ENST00000475635 STARD3NLO95772 234 aa16.75■□□□□ 0.27
CCDC57-208ENST00000475635 SERPINB2P05120 415 aa16.75■□□□□ 0.27
CCDC57-208ENST00000475635 NPC1L1Q9UHC9 1359 aa16.75■□□□□ 0.27
CCDC57-208ENST00000475635 COL11A2P13942 1736 aaPredicted RBP16.74■□□□□ 0.27
CCDC57-208ENST00000475635 U2SURPO15042 1029 aaKnown RBP16.74■□□□□ 0.27
CCDC57-208ENST00000475635 FER1L6Q2WGJ9 1857 aa16.73■□□□□ 0.27
CCDC57-208ENST00000475635 GNAT3A8MTJ3 354 aa16.73■□□□□ 0.27
CCDC57-208ENST00000475635 EIF5P55010 431 aaKnown RBP16.73■□□□□ 0.27
CCDC57-208ENST00000475635 RASSF7Q02833 373 aa16.73■□□□□ 0.27
CCDC57-208ENST00000475635 TEFQ10587 303 aa16.73■□□□□ 0.27
CCDC57-208ENST00000475635 BICDL1Q6ZP65 573 aa16.73■□□□□ 0.27
CCDC57-208ENST00000475635 DNAJC5GQ8N7S2 189 aa16.73■□□□□ 0.27
CCDC57-208ENST00000475635 IL17REQ8NFR9 667 aa16.73■□□□□ 0.27
CCDC57-208ENST00000475635 GAS2L2Q8NHY3 880 aa16.73■□□□□ 0.27
CCDC57-208ENST00000475635 ZNF496Q96IT1 587 aaPredicted RBP16.73■□□□□ 0.27
CCDC57-208ENST00000475635 BCORQ6W2J9 1755 aa16.73■□□□□ 0.27
CCDC57-208ENST00000475635 CARMIL3Q8ND23 1372 aa16.73■□□□□ 0.27
CCDC57-208ENST00000475635 A0A087WZG4 1122 aa16.72■□□□□ 0.27
CCDC57-208ENST00000475635 ZNF790Q6PG37 636 aa16.72■□□□□ 0.27
CCDC57-208ENST00000475635 C2CD5Q86YS7 1000 aa16.72■□□□□ 0.27
CCDC57-208ENST00000475635 TTLL6Q8N841 843 aa16.72■□□□□ 0.27
CCDC57-208ENST00000475635 RRAGCQ9HB90 399 aa16.72■□□□□ 0.27
CCDC57-208ENST00000475635 HEG1Q9ULI3 1381 aa16.72■□□□□ 0.27
CCDC57-208ENST00000475635 PCNTO95613 3336 aa16.71■□□□□ 0.27
CCDC57-208ENST00000475635 ZC3H4Q9UPT8 1303 aaKnown RBP16.7■□□□□ 0.26
CCDC57-208ENST00000475635 H0YIN7 160 aa16.7■□□□□ 0.26
CCDC57-208ENST00000475635 LMNB1P20700 586 aa16.7■□□□□ 0.26
CCDC57-208ENST00000475635 FSTL1Q12841 308 aa16.7■□□□□ 0.26
CCDC57-208ENST00000475635 TEX13AQ9BXU3 409 aaPredicted RBP16.7■□□□□ 0.26
CCDC57-208ENST00000475635 ZNF330Q9Y3S2 320 aaPredicted RBP16.7■□□□□ 0.26
CCDC57-208ENST00000475635 ARFGEF2Q9Y6D5 1785 aa16.69■□□□□ 0.26
CCDC57-208ENST00000475635 SLX4Q8IY92 1834 aa16.69■□□□□ 0.26
CCDC57-208ENST00000475635 PRELPP51888 382 aa16.69■□□□□ 0.26
CCDC57-208ENST00000475635 TBC1D9BQ66K14 1250 aa16.69■□□□□ 0.26
CCDC57-208ENST00000475635 TBC1D2BQ9UPU7 963 aa16.69■□□□□ 0.26
CCDC57-208ENST00000475635 CEMIPQ8WUJ3 1361 aa16.68■□□□□ 0.26
CCDC57-208ENST00000475635 HTRA3P83110 453 aa16.68■□□□□ 0.26
CCDC57-208ENST00000475635 IL6STP40189 918 aaPredicted RBP16.67■□□□□ 0.26
CCDC57-208ENST00000475635 PHACTR3Q96KR7 559 aa16.67■□□□□ 0.26
CCDC57-208ENST00000475635 FMNL2Q96PY5 1086 aa16.67■□□□□ 0.26
CCDC57-208ENST00000475635 GLTPD2A6NH11 291 aa16.66■□□□□ 0.26
CCDC57-208ENST00000475635 A1BGP04217 495 aa16.66■□□□□ 0.26
CCDC57-208ENST00000475635 PRKAR2BP31323 418 aa16.66■□□□□ 0.26
CCDC57-208ENST00000475635 PRR5LQ6MZQ0 368 aa16.66■□□□□ 0.26
CCDC57-208ENST00000475635 SMC1BQ8NDV3 1235 aa16.66■□□□□ 0.26
CCDC57-208ENST00000475635 ZNF622Q969S3 477 aaKnown RBP eCLIP16.66■□□□□ 0.26
CCDC57-208ENST00000475635 BRIP1Q9BX63 1249 aa16.66■□□□□ 0.26
CCDC57-208ENST00000475635 DLG5Q8TDM6 1919 aa16.66■□□□□ 0.26
CCDC57-208ENST00000475635 BTBD11A6QL63 1104 aa16.65■□□□□ 0.26
CCDC57-208ENST00000475635 NFKBIEO00221 500 aa16.65■□□□□ 0.26
CCDC57-208ENST00000475635 KCNQ3O43525 872 aa16.65■□□□□ 0.26
CCDC57-208ENST00000475635 PDE6BP35913 854 aa16.65■□□□□ 0.26
CCDC57-208ENST00000475635 NPM2Q86SE8 214 aaKnown RBP16.65■□□□□ 0.26
CCDC57-208ENST00000475635 CCDC24Q8N4L8 307 aa16.65■□□□□ 0.26
CCDC57-208ENST00000475635 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
CCDC57-208ENST00000475635 RSPH6AQ9H0K4 717 aa16.65■□□□□ 0.26
CCDC57-208ENST00000475635 PDZRN3Q9UPQ7 1066 aa16.65■□□□□ 0.26
CCDC57-208ENST00000475635 KLRG1Q96E93 195 aa16.64■□□□□ 0.25
CCDC57-208ENST00000475635 C21orf2O43822 256 aa16.63■□□□□ 0.25
CCDC57-208ENST00000475635 CAMTA2O94983 1202 aa16.63■□□□□ 0.25
CCDC57-208ENST00000475635 VEGFAP15692 232 aaPredicted RBP16.63■□□□□ 0.25
CCDC57-208ENST00000475635 SETDB2Q96T68 719 aa16.63■□□□□ 0.25
CCDC57-208ENST00000475635 NPHP1O15259 732 aa16.62■□□□□ 0.25
CCDC57-208ENST00000475635 DZIP3Q86Y13 1208 aaKnown RBP16.62■□□□□ 0.25
CCDC57-208ENST00000475635 CNBD1Q8NA66 436 aa16.62■□□□□ 0.25
CCDC57-208ENST00000475635 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
CCDC57-208ENST00000475635 NUDCQ9Y266 331 aa16.62■□□□□ 0.25
CCDC57-208ENST00000475635 LAMB4A4D0S4 1761 aa16.61■□□□□ 0.25
CCDC57-208ENST00000475635 PIP4K2AP48426 406 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms