RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 C1QTNF2Q9BXJ5 285 aa7.3□□□□□ -1.24
SRGAP3-205ENST00000475560 TSPAN10Q9H1Z9 355 aaPredicted RBP7.3□□□□□ -1.24
SRGAP3-205ENST00000475560 PIF1Q9H611 641 aa7.3□□□□□ -1.24
SRGAP3-205ENST00000475560 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.3□□□□□ -1.24
SRGAP3-205ENST00000475560 GNA15P30679 374 aa7.29□□□□□ -1.24
SRGAP3-205ENST00000475560 SCTRP47872 440 aa7.29□□□□□ -1.24
SRGAP3-205ENST00000475560 SCNN1DP51172 638 aa7.29□□□□□ -1.24
SRGAP3-205ENST00000475560 SDE2Q6IQ49 451 aa7.29□□□□□ -1.24
SRGAP3-205ENST00000475560 TRMT44Q8IYL2 757 aaKnown RBP7.29□□□□□ -1.24
SRGAP3-205ENST00000475560 ZNF511Q8NB15 262 aa7.29□□□□□ -1.24
SRGAP3-205ENST00000475560 POLR3GLQ9BT43 218 aa7.29□□□□□ -1.24
SRGAP3-205ENST00000475560 ESF1Q9H501 851 aaKnown RBP7.29□□□□□ -1.24
SRGAP3-205ENST00000475560 DDX41Q9UJV9 622 aaKnown RBP7.29□□□□□ -1.24
SRGAP3-205ENST00000475560 INPP5FQ9Y2H2 1132 aa7.29□□□□□ -1.24
SRGAP3-205ENST00000475560 TBX22Q9Y458 520 aa7.29□□□□□ -1.24
SRGAP3-205ENST00000475560 PNMA6FA0A0J9YX94 578 aa7.28□□□□□ -1.24
SRGAP3-205ENST00000475560 WASLO00401 505 aaPredicted RBP7.28□□□□□ -1.24
SRGAP3-205ENST00000475560 ZBTB39O15060 712 aa7.28□□□□□ -1.24
SRGAP3-205ENST00000475560 PPP1R12BO60237 982 aaPredicted RBP7.28□□□□□ -1.24
SRGAP3-205ENST00000475560 EPHA4P54764 986 aa7.28□□□□□ -1.24
SRGAP3-205ENST00000475560 GDF10P55107 478 aa7.28□□□□□ -1.24
SRGAP3-205ENST00000475560 LINC01559Q495D7 138 aa7.28□□□□□ -1.24
SRGAP3-205ENST00000475560 PPP1R18Q6NYC8 613 aa7.28□□□□□ -1.24
SRGAP3-205ENST00000475560 ZNF654Q8IZM8 581 aa7.28□□□□□ -1.24
SRGAP3-205ENST00000475560 KCTD12Q96CX2 325 aaKnown RBP7.28□□□□□ -1.24
SRGAP3-205ENST00000475560 FRMD6Q96NE9 622 aa7.28□□□□□ -1.24
SRGAP3-205ENST00000475560 ZSWIM4Q9H7M6 989 aa7.28□□□□□ -1.24
SRGAP3-205ENST00000475560 AK5Q9Y6K8 562 aa7.28□□□□□ -1.24
SRGAP3-205ENST00000475560 ZBTB24O43167 697 aaPredicted RBP7.27□□□□□ -1.25
SRGAP3-205ENST00000475560 INHAP05111 366 aa7.27□□□□□ -1.25
SRGAP3-205ENST00000475560 RAB15P59190 212 aa7.27□□□□□ -1.25
SRGAP3-205ENST00000475560 RACK1P63244 317 aaKnown RBP7.27□□□□□ -1.25
SRGAP3-205ENST00000475560 VPS37DQ86XT2 251 aa7.27□□□□□ -1.25
SRGAP3-205ENST00000475560 STAG2Q8N3U4 1231 aa7.27□□□□□ -1.25
SRGAP3-205ENST00000475560 ABTB2Q8N961 1025 aa7.27□□□□□ -1.25
SRGAP3-205ENST00000475560 SLC4A9Q96Q91 983 aa7.27□□□□□ -1.25
SRGAP3-205ENST00000475560 KCTD15Q96SI1 283 aaPredicted RBP7.27□□□□□ -1.25
SRGAP3-205ENST00000475560 SERTAD1Q9UHV2 236 aa7.27□□□□□ -1.25
SRGAP3-205ENST00000475560 ERVH48-1M5A8F1 160 aa7.26□□□□□ -1.25
SRGAP3-205ENST00000475560 STAU1O95793 577 aaKnown RBP7.26□□□□□ -1.25
SRGAP3-205ENST00000475560 CTSHP09668 335 aa7.26□□□□□ -1.25
SRGAP3-205ENST00000475560 BCAMP50895 628 aa7.26□□□□□ -1.25
SRGAP3-205ENST00000475560 COPS2P61201 443 aa7.26□□□□□ -1.25
SRGAP3-205ENST00000475560 C2orf49Q9BVC5 232 aaPredicted RBP7.26□□□□□ -1.25
SRGAP3-205ENST00000475560 CFHR5Q9BXR6 569 aa7.26□□□□□ -1.25
SRGAP3-205ENST00000475560 CYLDQ9NQC7 956 aa7.26□□□□□ -1.25
SRGAP3-205ENST00000475560 LRFN2Q9ULH4 789 aa7.26□□□□□ -1.25
SRGAP3-205ENST00000475560 POLIQ9UNA4 740 aa7.26□□□□□ -1.25
SRGAP3-205ENST00000475560 ADH1BP00325 375 aa7.25□□□□□ -1.25
SRGAP3-205ENST00000475560 BRD2P25440 801 aaKnown RBP7.25□□□□□ -1.25
SRGAP3-205ENST00000475560 ERVK-9P63128 1117 aa7.25□□□□□ -1.25
SRGAP3-205ENST00000475560 FOXK2Q01167 660 aa7.25□□□□□ -1.25
SRGAP3-205ENST00000475560 ZNF394Q53GI3 561 aa7.25□□□□□ -1.25
SRGAP3-205ENST00000475560 CC2D2BQ6DHV5 1058 aa7.25□□□□□ -1.25
SRGAP3-205ENST00000475560 ATCAYQ86WG3 371 aa7.25□□□□□ -1.25
SRGAP3-205ENST00000475560 GJD3Q8N144 294 aa7.25□□□□□ -1.25
SRGAP3-205ENST00000475560 CRELD1Q96HD1 420 aa7.25□□□□□ -1.25
SRGAP3-205ENST00000475560 SPACA7Q96KW9 195 aa7.25□□□□□ -1.25
SRGAP3-205ENST00000475560 OSBPL3Q9H4L5 887 aa7.25□□□□□ -1.25
SRGAP3-205ENST00000475560 QTRT2Q9H974 415 aaKnown RBP7.25□□□□□ -1.25
SRGAP3-205ENST00000475560 SRA1Q9HD15 236 aaKnown RBP7.25□□□□□ -1.25
SRGAP3-205ENST00000475560 MZF1P28698 734 aaPredicted RBP7.24□□□□□ -1.25
SRGAP3-205ENST00000475560 USP5P45974 858 aa7.24□□□□□ -1.25
SRGAP3-205ENST00000475560 FAM26DQ5JW98 314 aa7.24□□□□□ -1.25
SRGAP3-205ENST00000475560 ZNF746Q6NUN9 644 aaPredicted RBP7.24□□□□□ -1.25
SRGAP3-205ENST00000475560 USP48Q86UV5 1035 aa7.24□□□□□ -1.25
SRGAP3-205ENST00000475560 FBF1Q8TES7 1133 aa7.24□□□□□ -1.25
SRGAP3-205ENST00000475560 WNT2BQ93097 391 aa7.24□□□□□ -1.25
SRGAP3-205ENST00000475560 MYO19Q96H55 970 aa7.24□□□□□ -1.25
SRGAP3-205ENST00000475560 CSRNP1Q96S65 589 aa7.24□□□□□ -1.25
SRGAP3-205ENST00000475560 OSBPL2Q9H1P3 480 aa7.24□□□□□ -1.25
SRGAP3-205ENST00000475560 STK10O94804 968 aaKnown RBP7.23□□□□□ -1.25
SRGAP3-205ENST00000475560 PTPN12Q05209 780 aaKnown RBP7.23□□□□□ -1.25
SRGAP3-205ENST00000475560 INTS6LQ5JSJ4 861 aaKnown RBP7.23□□□□□ -1.25
SRGAP3-205ENST00000475560 TBCELQ5QJ74 424 aa7.23□□□□□ -1.25
SRGAP3-205ENST00000475560 MCF2L2Q86YR7 1114 aa7.23□□□□□ -1.25
SRGAP3-205ENST00000475560 NLGN1Q8N2Q7 840 aa7.23□□□□□ -1.25
SRGAP3-205ENST00000475560 ETNK1Q9HBU6 452 aa7.23□□□□□ -1.25
SRGAP3-205ENST00000475560 SCHIP1Q9P0W5 487 aaPredicted RBP7.23□□□□□ -1.25
SRGAP3-205ENST00000475560 PCDHGB7Q9Y5F8 929 aa7.23□□□□□ -1.25
SRGAP3-205ENST00000475560 MARCH6O60337 910 aa7.22□□□□□ -1.25
SRGAP3-205ENST00000475560 ZPR1O75312 459 aa7.22□□□□□ -1.25
SRGAP3-205ENST00000475560 SH3BP2P78314 561 aa7.22□□□□□ -1.25
SRGAP3-205ENST00000475560 DNM1Q05193 864 aaKnown RBP7.22□□□□□ -1.25
SRGAP3-205ENST00000475560 TCEAL1Q15170 157 aa7.22□□□□□ -1.25
SRGAP3-205ENST00000475560 THSD4Q6ZMP0 1018 aa7.22□□□□□ -1.25
SRGAP3-205ENST00000475560 SLC9A9Q8IVB4 645 aa7.22□□□□□ -1.25
SRGAP3-205ENST00000475560 A6NJY4 79 aa7.21□□□□□ -1.26
SRGAP3-205ENST00000475560 TLL1O43897 1013 aa7.21□□□□□ -1.26
SRGAP3-205ENST00000475560 EIF4BP23588 611 aaKnown RBP7.21□□□□□ -1.26
SRGAP3-205ENST00000475560 PSMA6P60900 246 aaKnown RBP7.21□□□□□ -1.26
SRGAP3-205ENST00000475560 EDEM1Q92611 657 aa7.21□□□□□ -1.26
SRGAP3-205ENST00000475560 GPATCH3Q96I76 525 aa7.21□□□□□ -1.26
SRGAP3-205ENST00000475560 SLC6A16Q9GZN6 736 aa7.21□□□□□ -1.26
SRGAP3-205ENST00000475560 WBP1LQ9NX94 342 aa7.21□□□□□ -1.26
SRGAP3-205ENST00000475560 RAB11FIP3O75154 756 aa7.2□□□□□ -1.26
SRGAP3-205ENST00000475560 PDGFAP04085 211 aa7.2□□□□□ -1.26
SRGAP3-205ENST00000475560 FGRP09769 529 aa7.2□□□□□ -1.26
SRGAP3-205ENST00000475560 SMTNP53814 917 aa7.2□□□□□ -1.26
SRGAP3-205ENST00000475560 IGBP1P78318 339 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms