RNA–Protein interactions for RNA: ENST00000475323.5

ARHGEF39-203, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 2,862 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-203ENST00000475323 PHAXQ9H814 394 aaKnown RBP16.32■□□□□ 0.2
ARHGEF39-203ENST00000475323 SPG7Q9UQ90 795 aa16.32■□□□□ 0.2
ARHGEF39-203ENST00000475323 SNX14Q9Y5W7 946 aa16.32■□□□□ 0.2
ARHGEF39-203ENST00000475323 SURF6O75683 361 aaKnown RBP16.31■□□□□ 0.2
ARHGEF39-203ENST00000475323 RGPD1P0DJD0 1748 aa16.31■□□□□ 0.2
ARHGEF39-203ENST00000475323 LARGE1O95461 756 aa16.31■□□□□ 0.2
ARHGEF39-203ENST00000475323 CCDC30Q5VVM6 783 aa16.31■□□□□ 0.2
ARHGEF39-203ENST00000475323 RUFY3Q7L099 469 aa16.31■□□□□ 0.2
ARHGEF39-203ENST00000475323 PHF14O94880 888 aa16.3■□□□□ 0.2
ARHGEF39-203ENST00000475323 UBTFL1P0CB47 393 aaPredicted RBP16.3■□□□□ 0.2
ARHGEF39-203ENST00000475323 SYT1P21579 422 aa16.3■□□□□ 0.2
ARHGEF39-203ENST00000475323 PPP1R42Q7Z4L9 355 aa16.3■□□□□ 0.2
ARHGEF39-203ENST00000475323 DDX54Q8TDD1 881 aaKnown RBP16.3■□□□□ 0.2
ARHGEF39-203ENST00000475323 CEP170BQ9Y4F5 1589 aaPredicted RBP16.3■□□□□ 0.2
ARHGEF39-203ENST00000475323 GIMAP6Q6P9H5 292 aa16.3■□□□□ 0.2
ARHGEF39-203ENST00000475323 PI4K2BQ8TCG2 481 aa16.3■□□□□ 0.2
ARHGEF39-203ENST00000475323 MAP7D2Q96T17 732 aa16.3■□□□□ 0.2
ARHGEF39-203ENST00000475323 SSH2Q76I76 1423 aa16.3■□□□□ 0.2
ARHGEF39-203ENST00000475323 ZSCAN22P10073 491 aaPredicted RBP16.29■□□□□ 0.2
ARHGEF39-203ENST00000475323 CCDC183Q5T5S1 534 aa16.29■□□□□ 0.2
ARHGEF39-203ENST00000475323 CWC27Q6UX04 472 aaKnown RBP16.29■□□□□ 0.2
ARHGEF39-203ENST00000475323 PRDM10Q9NQV6 1147 aa16.29■□□□□ 0.2
ARHGEF39-203ENST00000475323 NOLC1Q14978 699 aaKnown RBP eCLIP16.29■□□□□ 0.2
ARHGEF39-203ENST00000475323 TTC14Q96N46 770 aa16.29■□□□□ 0.2
ARHGEF39-203ENST00000475323 SOS1Q07889 1333 aaPredicted RBP16.29■□□□□ 0.2
ARHGEF39-203ENST00000475323 SGSM2O43147 1006 aa16.28■□□□□ 0.2
ARHGEF39-203ENST00000475323 AP5Z1O43299 807 aa16.28■□□□□ 0.2
ARHGEF39-203ENST00000475323 STX6O43752 255 aa16.28■□□□□ 0.2
ARHGEF39-203ENST00000475323 USP6P35125 1406 aa16.28■□□□□ 0.2
ARHGEF39-203ENST00000475323 AMPHP49418 695 aa16.28■□□□□ 0.2
ARHGEF39-203ENST00000475323 IL17RAQ96F46 866 aa16.28■□□□□ 0.2
ARHGEF39-203ENST00000475323 SPATA31D1Q6ZQQ2 1576 aa16.28■□□□□ 0.2
ARHGEF39-203ENST00000475323 ARHGEF10O15013 1369 aa16.28■□□□□ 0.2
ARHGEF39-203ENST00000475323 LSG1Q9H089 658 aaKnown RBP16.28■□□□□ 0.2
ARHGEF39-203ENST00000475323 RAD50Q92878 1312 aa16.28■□□□□ 0.2
ARHGEF39-203ENST00000475323 NUTM2GQ5VZR2 741 aa16.28■□□□□ 0.2
ARHGEF39-203ENST00000475323 IL17REQ8NFR9 667 aa16.28■□□□□ 0.2
ARHGEF39-203ENST00000475323 RHPN1Q8TCX5 695 aa16.28■□□□□ 0.2
ARHGEF39-203ENST00000475323 SSH3Q8TE77 659 aa16.28■□□□□ 0.2
ARHGEF39-203ENST00000475323 PIBF1Q8WXW3 757 aa16.28■□□□□ 0.2
ARHGEF39-203ENST00000475323 XRN1Q8IZH2 1706 aaKnown RBP16.27■□□□□ 0.2
ARHGEF39-203ENST00000475323 MYRIPQ8NFW9 859 aa16.27■□□□□ 0.2
ARHGEF39-203ENST00000475323 NBPF7P0C2Y1 421 aaPredicted RBP16.27■□□□□ 0.19
ARHGEF39-203ENST00000475323 TMEM87AQ8NBN3 555 aa16.27■□□□□ 0.19
ARHGEF39-203ENST00000475323 USP31Q70CQ4 1352 aa16.26■□□□□ 0.19
ARHGEF39-203ENST00000475323 PLEKHG3A1L390 1219 aa16.26■□□□□ 0.19
ARHGEF39-203ENST00000475323 SRGAP3O43295 1099 aa16.26■□□□□ 0.19
ARHGEF39-203ENST00000475323 DNM1Q05193 864 aaKnown RBP16.26■□□□□ 0.19
ARHGEF39-203ENST00000475323 CCDC83Q8IWF9 413 aa16.26■□□□□ 0.19
ARHGEF39-203ENST00000475323 LTV1Q96GA3 475 aaPredicted RBP16.26■□□□□ 0.19
ARHGEF39-203ENST00000475323 PRDM4Q9UKN5 801 aa16.26■□□□□ 0.19
ARHGEF39-203ENST00000475323 F13A1P00488 732 aa16.26■□□□□ 0.19
ARHGEF39-203ENST00000475323 CASTP20810 708 aaKnown RBP16.26■□□□□ 0.19
ARHGEF39-203ENST00000475323 ZNF710Q8N1W2 664 aa16.26■□□□□ 0.19
ARHGEF39-203ENST00000475323 FAM184AQ8NB25 1140 aa16.26■□□□□ 0.19
ARHGEF39-203ENST00000475323 LIMCH1Q9UPQ0 1083 aa16.26■□□□□ 0.19
ARHGEF39-203ENST00000475323 SMC3Q9UQE7 1217 aa16.26■□□□□ 0.19
ARHGEF39-203ENST00000475323 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.26■□□□□ 0.19
ARHGEF39-203ENST00000475323 GNAT3A8MTJ3 354 aa16.25■□□□□ 0.19
ARHGEF39-203ENST00000475323 EIF2S2P20042 333 aaKnown RBP16.25■□□□□ 0.19
ARHGEF39-203ENST00000475323 UBE2HP62256 183 aa16.25■□□□□ 0.19
ARHGEF39-203ENST00000475323 UVSSAQ2YD98 709 aa16.25■□□□□ 0.19
ARHGEF39-203ENST00000475323 ADCK5Q3MIX3 580 aa16.25■□□□□ 0.19
ARHGEF39-203ENST00000475323 TECPR2O15040 1411 aa16.25■□□□□ 0.19
ARHGEF39-203ENST00000475323 SIRT1Q96EB6 747 aa16.25■□□□□ 0.19
ARHGEF39-203ENST00000475323 CHMP3Q9Y3E7 222 aa16.25■□□□□ 0.19
ARHGEF39-203ENST00000475323 KDM4AO75164 1064 aa16.24■□□□□ 0.19
ARHGEF39-203ENST00000475323 PTH1RQ03431 593 aa16.24■□□□□ 0.19
ARHGEF39-203ENST00000475323 COL9A3Q14050 684 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF39-203ENST00000475323 HDGFL1Q5TGJ6 251 aa16.24■□□□□ 0.19
ARHGEF39-203ENST00000475323 ESF1Q9H501 851 aaKnown RBP16.24■□□□□ 0.19
ARHGEF39-203ENST00000475323 AGLP35573 1532 aa16.24■□□□□ 0.19
ARHGEF39-203ENST00000475323 KDRP35968 1356 aa16.24■□□□□ 0.19
ARHGEF39-203ENST00000475323 IGSF1Q8N6C5 1336 aa16.24■□□□□ 0.19
ARHGEF39-203ENST00000475323 ANXA1P04083 346 aa16.24■□□□□ 0.19
ARHGEF39-203ENST00000475323 SPC24Q8NBT2 197 aa16.24■□□□□ 0.19
ARHGEF39-203ENST00000475323 PPP6R1Q9UPN7 881 aa16.24■□□□□ 0.19
ARHGEF39-203ENST00000475323 FAM208AQ9UK61 1670 aaKnown RBP16.24■□□□□ 0.19
ARHGEF39-203ENST00000475323 GJB2P29033 226 aa16.24■□□□□ 0.19
ARHGEF39-203ENST00000475323 USHBP1Q8N6Y0 703 aa16.24■□□□□ 0.19
ARHGEF39-203ENST00000475323 SLC26A8Q96RN1 970 aa16.24■□□□□ 0.19
ARHGEF39-203ENST00000475323 FLT4P35916 1363 aa16.24■□□□□ 0.19
ARHGEF39-203ENST00000475323 KIF13AQ9H1H9 1805 aa16.23■□□□□ 0.19
ARHGEF39-203ENST00000475323 AOX1Q06278 1338 aa16.23■□□□□ 0.19
ARHGEF39-203ENST00000475323 NECAB1Q8N987 351 aa16.23■□□□□ 0.19
ARHGEF39-203ENST00000475323 FUCA2Q9BTY2 467 aa16.23■□□□□ 0.19
ARHGEF39-203ENST00000475323 POLA2Q14181 598 aa16.22■□□□□ 0.19
ARHGEF39-203ENST00000475323 KCNF1Q9H3M0 494 aa16.22■□□□□ 0.19
ARHGEF39-203ENST00000475323 HYPKQ9NX55 129 aa16.22■□□□□ 0.19
ARHGEF39-203ENST00000475323 PYCARDQ9ULZ3 195 aa16.22■□□□□ 0.19
ARHGEF39-203ENST00000475323 NALCNQ8IZF0 1738 aa16.22■□□□□ 0.19
ARHGEF39-203ENST00000475323 SBNO1A3KN83 1393 aa16.22■□□□□ 0.19
ARHGEF39-203ENST00000475323 VPS37CA5D8V6 355 aaPredicted RBP16.22■□□□□ 0.19
ARHGEF39-203ENST00000475323 PRPF40BQ6NWY9 871 aaKnown RBP16.22■□□□□ 0.19
ARHGEF39-203ENST00000475323 FAM173BQ6P4H8 233 aa16.22■□□□□ 0.19
ARHGEF39-203ENST00000475323 CNTROBQ8N137 903 aa16.22■□□□□ 0.19
ARHGEF39-203ENST00000475323 MTMR6Q9Y217 621 aa16.22■□□□□ 0.19
ARHGEF39-203ENST00000475323 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.22■□□□□ 0.19
ARHGEF39-203ENST00000475323 ST3GAL1Q11201 340 aa16.21■□□□□ 0.19
ARHGEF39-203ENST00000475323 JAKMIP1Q96N16 626 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms