RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ATP5J2-PTCD1G3V325 749 aa12.76□□□□□ -0.37
VAPB-204ENST00000475243 SLC5A1P13866 664 aa12.76□□□□□ -0.37
VAPB-204ENST00000475243 NLRP5P59047 1200 aa12.76□□□□□ -0.37
VAPB-204ENST00000475243 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.76□□□□□ -0.37
VAPB-204ENST00000475243 EMILIN1Q9Y6C2 1016 aa12.76□□□□□ -0.37
VAPB-204ENST00000475243 SPA17Q15506 151 aa12.75□□□□□ -0.37
VAPB-204ENST00000475243 TSHZ3Q63HK5 1081 aa12.75□□□□□ -0.37
VAPB-204ENST00000475243 RAB11FIP4Q86YS3 637 aa12.75□□□□□ -0.37
VAPB-204ENST00000475243 CKAP2LQ8IYA6 745 aa12.75□□□□□ -0.37
VAPB-204ENST00000475243 C6orf229H3BNL8 230 aa12.75□□□□□ -0.37
VAPB-204ENST00000475243 POTEJP0CG39 1038 aa12.75□□□□□ -0.37
VAPB-204ENST00000475243 GOPCQ9HD26 462 aa12.75□□□□□ -0.37
VAPB-204ENST00000475243 PPM1FP49593 454 aaPredicted RBP12.75□□□□□ -0.37
VAPB-204ENST00000475243 ANAPC15P60006 121 aa12.75□□□□□ -0.37
VAPB-204ENST00000475243 SSRP1Q08945 709 aaKnown RBP12.75□□□□□ -0.37
VAPB-204ENST00000475243 RARSP54136 660 aaKnown RBP12.75□□□□□ -0.37
VAPB-204ENST00000475243 GDPD2Q9HCC8 539 aa12.75□□□□□ -0.37
VAPB-204ENST00000475243 MAP3K2Q9Y2U5 619 aa12.75□□□□□ -0.37
VAPB-204ENST00000475243 TROQ12816 1431 aaPredicted RBP12.75□□□□□ -0.37
VAPB-204ENST00000475243 NGLY1Q96IV0 654 aa12.75□□□□□ -0.37
VAPB-204ENST00000475243 ARHGEF11O15085 1522 aa12.75□□□□□ -0.37
VAPB-204ENST00000475243 EZRP15311 586 aaKnown RBP12.75□□□□□ -0.37
VAPB-204ENST00000475243 SNRKQ9NRH2 765 aa12.75□□□□□ -0.37
VAPB-204ENST00000475243 TFIP11Q9UBB9 837 aaKnown RBP12.75□□□□□ -0.37
VAPB-204ENST00000475243 RPGRIP1LQ68CZ1 1315 aa12.74□□□□□ -0.37
VAPB-204ENST00000475243 GOLGA8BA8MQT2 603 aa12.74□□□□□ -0.37
VAPB-204ENST00000475243 CASQ1P31415 396 aa12.74□□□□□ -0.37
VAPB-204ENST00000475243 CCDC178Q5BJE1 867 aa12.74□□□□□ -0.37
VAPB-204ENST00000475243 CTNNBL1Q8WYA6 563 aaPredicted RBP12.74□□□□□ -0.37
VAPB-204ENST00000475243 HAND2P61296 217 aa12.74□□□□□ -0.37
VAPB-204ENST00000475243 TSG101Q99816 390 aa12.74□□□□□ -0.37
VAPB-204ENST00000475243 PANK2Q9BZ23 570 aa12.74□□□□□ -0.37
VAPB-204ENST00000475243 BCCIPQ9P287 314 aaKnown RBP eCLIP12.74□□□□□ -0.374e-12■■■■■ 38.6
VAPB-204ENST00000475243 MACROD2A1Z1Q3 448 aa12.74□□□□□ -0.37
VAPB-204ENST00000475243 GOLIM4O00461 696 aa12.74□□□□□ -0.37
VAPB-204ENST00000475243 UBXN4Q92575 508 aa12.74□□□□□ -0.37
VAPB-204ENST00000475243 GOLGA6L7A0A1B0GV03 622 aa12.74□□□□□ -0.37
VAPB-204ENST00000475243 FKBP15Q5T1M5 1219 aa12.74□□□□□ -0.37
VAPB-204ENST00000475243 TRMT1Q9NXH9 659 aaKnown RBP12.74□□□□□ -0.37
VAPB-204ENST00000475243 EPRSP07814 1512 aaKnown RBP12.74□□□□□ -0.37
VAPB-204ENST00000475243 CCDC196A0A1B0GTZ2 297 aa12.74□□□□□ -0.37
VAPB-204ENST00000475243 ANKRD18BA2A2Z9 1011 aa12.74□□□□□ -0.37
VAPB-204ENST00000475243 BIN1O00499 593 aa12.74□□□□□ -0.37
VAPB-204ENST00000475243 TRIM21P19474 475 aaKnown RBP12.74□□□□□ -0.37
VAPB-204ENST00000475243 TIAM1Q13009 1591 aa12.74□□□□□ -0.37
VAPB-204ENST00000475243 POGZQ7Z3K3 1410 aa12.74□□□□□ -0.37
VAPB-204ENST00000475243 PPP4R3AQ6IN85 833 aa12.73□□□□□ -0.37
VAPB-204ENST00000475243 CNNM3Q8NE01 707 aa12.73□□□□□ -0.37
VAPB-204ENST00000475243 DYDC1Q8WWB3 177 aa12.73□□□□□ -0.37
VAPB-204ENST00000475243 SPTY2D1Q68D10 685 aaPredicted RBP12.73□□□□□ -0.37
VAPB-204ENST00000475243 DNAAF4Q8WXU2 420 aa12.73□□□□□ -0.37
VAPB-204ENST00000475243 CEBPAP49715 358 aaPredicted RBP12.73□□□□□ -0.37
VAPB-204ENST00000475243 PTPN14Q15678 1187 aa12.73□□□□□ -0.37
VAPB-204ENST00000475243 NUP88Q99567 741 aaPredicted RBP12.73□□□□□ -0.37
VAPB-204ENST00000475243 SFPQP23246 707 aaKnown RBP eCLIP12.73□□□□□ -0.372e-8■□□□□ 10.1
VAPB-204ENST00000475243 CUL5Q93034 780 aa12.73□□□□□ -0.37
VAPB-204ENST00000475243 ESPNB1AK53 854 aa12.73□□□□□ -0.37
VAPB-204ENST00000475243 AMOTQ4VCS5 1084 aa12.73□□□□□ -0.37
VAPB-204ENST00000475243 CATIPQ7Z7H3 387 aa12.73□□□□□ -0.37
VAPB-204ENST00000475243 CIZ1Q9ULV3 898 aaPredicted RBP12.73□□□□□ -0.37
VAPB-204ENST00000475243 TOP1P11387 765 aaKnown RBP12.72□□□□□ -0.37
VAPB-204ENST00000475243 ANO10Q9NW15 660 aa12.72□□□□□ -0.37
VAPB-204ENST00000475243 URI1O94763 535 aaPredicted RBP12.72□□□□□ -0.37
VAPB-204ENST00000475243 PRKCSHP14314 528 aaPredicted RBP12.72□□□□□ -0.37
VAPB-204ENST00000475243 AMOTL2Q9Y2J4 779 aa12.72□□□□□ -0.37
VAPB-204ENST00000475243 EFCAB5A4FU69 1503 aa12.72□□□□□ -0.37
VAPB-204ENST00000475243 CCDC183Q5T5S1 534 aa12.72□□□□□ -0.37
VAPB-204ENST00000475243 GOLGA8AA7E2F4 631 aa12.72□□□□□ -0.37
VAPB-204ENST00000475243 HYPKQ9NX55 129 aa12.72□□□□□ -0.37
VAPB-204ENST00000475243 GOLGA6L10A0A0M3HER8 536 aa12.72□□□□□ -0.37
VAPB-204ENST00000475243 CRACR2AQ9BSW2 395 aa12.72□□□□□ -0.37
VAPB-204ENST00000475243 FBLN1P23142 703 aa12.71□□□□□ -0.37
VAPB-204ENST00000475243 MAPK8IP2Q13387 824 aaPredicted RBP12.71□□□□□ -0.37
VAPB-204ENST00000475243 KIF4BQ2VIQ3 1234 aa12.71□□□□□ -0.37
VAPB-204ENST00000475243 FBXO31Q5XUX0 539 aaPredicted RBP12.71□□□□□ -0.37
VAPB-204ENST00000475243 MRC2Q9UBG0 1479 aa12.71□□□□□ -0.37
VAPB-204ENST00000475243 TDRD12Q587J7 1177 aaKnown RBP12.71□□□□□ -0.37
VAPB-204ENST00000475243 NKTRP30414 1462 aaKnown RBP12.71□□□□□ -0.37
VAPB-204ENST00000475243 SSFA2P28290 1259 aa12.71□□□□□ -0.37
VAPB-204ENST00000475243 FAM83GA6ND36 823 aa12.71□□□□□ -0.38
VAPB-204ENST00000475243 KIF5CO60282 957 aa12.71□□□□□ -0.38
VAPB-204ENST00000475243 CETN2P41208 172 aa12.71□□□□□ -0.38
VAPB-204ENST00000475243 TMEM266Q2M3C6 531 aa12.71□□□□□ -0.38
VAPB-204ENST00000475243 CFAP65Q6ZU64 1925 aaKnown RBP12.71□□□□□ -0.38
VAPB-204ENST00000475243 GSTTP1A0A1W2PQM5 241 aa12.71□□□□□ -0.38
VAPB-204ENST00000475243 EXOC5O00471 708 aa12.71□□□□□ -0.38
VAPB-204ENST00000475243 USP8P40818 1118 aa12.71□□□□□ -0.38
VAPB-204ENST00000475243 LDHAL6AQ6ZMR3 332 aa12.71□□□□□ -0.38
VAPB-204ENST00000475243 CCDC194A0A1B0GVG4 234 aa12.71□□□□□ -0.38
VAPB-204ENST00000475243 MAP2K1Q02750 393 aaPredicted RBP12.71□□□□□ -0.38
VAPB-204ENST00000475243 FEZ1Q99689 392 aa12.71□□□□□ -0.38
VAPB-204ENST00000475243 ANXA1P04083 346 aa12.7□□□□□ -0.38
VAPB-204ENST00000475243 TMEM67Q5HYA8 995 aa12.7□□□□□ -0.38
VAPB-204ENST00000475243 CLIP2Q9UDT6 1046 aa12.7□□□□□ -0.38
VAPB-204ENST00000475243 FSIP1Q8NA03 581 aa12.7□□□□□ -0.38
VAPB-204ENST00000475243 ALDH1L2Q3SY69 923 aa12.7□□□□□ -0.38
VAPB-204ENST00000475243 MICU3Q86XE3 530 aa12.7□□□□□ -0.38
VAPB-204ENST00000475243 PSMD1Q99460 953 aa12.7□□□□□ -0.38
VAPB-204ENST00000475243 SAMM50Q9Y512 469 aa12.7□□□□□ -0.38
VAPB-204ENST00000475243 UBE3BQ7Z3V4 1068 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms