RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 KDM6AO15550 1401 aaPredicted RBP12.9□□□□□ -0.34
PCCB-213ENST00000475214 ZBTB7BO15156 539 aaPredicted RBP12.9□□□□□ -0.34
PCCB-213ENST00000475214 NBPF14Q5TI25 921 aa12.9□□□□□ -0.34
PCCB-213ENST00000475214 INTS3Q68E01 1043 aaKnown RBP12.9□□□□□ -0.34
PCCB-213ENST00000475214 RREB1Q92766 1687 aa12.89□□□□□ -0.35
PCCB-213ENST00000475214 KCNQ3O43525 872 aa12.89□□□□□ -0.35
PCCB-213ENST00000475214 EIF2S2P20042 333 aaKnown RBP12.89□□□□□ -0.35
PCCB-213ENST00000475214 CABP4P57796 275 aa12.89□□□□□ -0.35
PCCB-213ENST00000475214 G2E3Q7L622 706 aa12.89□□□□□ -0.35
PCCB-213ENST00000475214 NFATC2IPQ8NCF5 419 aa12.89□□□□□ -0.35
PCCB-213ENST00000475214 NECTIN2Q92692 538 aa12.89□□□□□ -0.35
PCCB-213ENST00000475214 CCT4P50991 539 aaKnown RBP12.88□□□□□ -0.35
PCCB-213ENST00000475214 FLIIQ13045 1269 aa12.88□□□□□ -0.35
PCCB-213ENST00000475214 HDAC1Q13547 482 aaPredicted RBP12.88□□□□□ -0.35
PCCB-213ENST00000475214 ZNF790Q6PG37 636 aa12.88□□□□□ -0.35
PCCB-213ENST00000475214 TTC5Q8N0Z6 440 aa12.88□□□□□ -0.35
PCCB-213ENST00000475214 MRC1P22897 1456 aa12.88□□□□□ -0.35
PCCB-213ENST00000475214 NUP188Q5SRE5 1749 aa12.88□□□□□ -0.35
PCCB-213ENST00000475214 HEG1Q9ULI3 1381 aa12.87□□□□□ -0.35
PCCB-213ENST00000475214 ERVV-2B6SEH9 535 aa12.87□□□□□ -0.35
PCCB-213ENST00000475214 EXOC5O00471 708 aa12.87□□□□□ -0.35
PCCB-213ENST00000475214 GIGYF1O75420 1035 aaPredicted RBP12.87□□□□□ -0.35
PCCB-213ENST00000475214 FKBP5Q13451 457 aaPredicted RBP12.87□□□□□ -0.35
PCCB-213ENST00000475214 NKX1-1Q15270 411 aaPredicted RBP12.87□□□□□ -0.35
PCCB-213ENST00000475214 DDX54Q8TDD1 881 aaKnown RBP12.86□□□□□ -0.35
PCCB-213ENST00000475214 DBF4Q9UBU7 674 aaPredicted RBP12.86□□□□□ -0.35
PCCB-213ENST00000475214 SLC39A6Q13433 755 aa12.85□□□□□ -0.35
PCCB-213ENST00000475214 SLC4A10Q6U841 1118 aa12.85□□□□□ -0.35
PCCB-213ENST00000475214 FMNL2Q96PY5 1086 aa12.85□□□□□ -0.35
PCCB-213ENST00000475214 CHPF2Q9P2E5 772 aa12.85□□□□□ -0.35
PCCB-213ENST00000475214 PLSCR1O15162 318 aa12.84□□□□□ -0.35
PCCB-213ENST00000475214 BCL11BQ9C0K0 894 aaPredicted RBP12.84□□□□□ -0.35
PCCB-213ENST00000475214 BCL9O00512 1426 aa12.84□□□□□ -0.35
PCCB-213ENST00000475214 SHANK3Q9BYB0 1731 aa12.84□□□□□ -0.35
PCCB-213ENST00000475214 F6X3S4 739 aa12.83□□□□□ -0.36
PCCB-213ENST00000475214 SNRPA1P09661 255 aaKnown RBP12.83□□□□□ -0.36
PCCB-213ENST00000475214 PHAXQ9H814 394 aaKnown RBP12.83□□□□□ -0.36
PCCB-213ENST00000475214 HYPKQ9NX55 129 aa12.83□□□□□ -0.36
PCCB-213ENST00000475214 PXDNLA1KZ92 1463 aa12.83□□□□□ -0.36
PCCB-213ENST00000475214 RGS3P49796 1198 aa12.82□□□□□ -0.36
PCCB-213ENST00000475214 ZNF496Q96IT1 587 aaPredicted RBP12.82□□□□□ -0.36
PCCB-213ENST00000475214 PDZRN3Q9UPQ7 1066 aa12.82□□□□□ -0.36
PCCB-213ENST00000475214 RBM19Q9Y4C8 960 aaKnown RBP12.82□□□□□ -0.36
PCCB-213ENST00000475214 GNAI3P08754 354 aa12.81□□□□□ -0.36
PCCB-213ENST00000475214 RPAP2Q8IXW5 612 aaPredicted RBP12.81□□□□□ -0.36
PCCB-213ENST00000475214 SMC5Q8IY18 1101 aa12.81□□□□□ -0.36
PCCB-213ENST00000475214 MARCH10Q8NA82 808 aaPredicted RBP12.81□□□□□ -0.36
PCCB-213ENST00000475214 GCC1Q96CN9 775 aa12.81□□□□□ -0.36
PCCB-213ENST00000475214 C1orf115Q9H7X2 142 aa12.81□□□□□ -0.36
PCCB-213ENST00000475214 DDX21Q9NR30 783 aaKnown RBP eCLIP12.81□□□□□ -0.36
PCCB-213ENST00000475214 RGPD3A6NKT7 1758 aaPredicted RBP12.8□□□□□ -0.36
PCCB-213ENST00000475214 RGPD4Q7Z3J3 1758 aa12.8□□□□□ -0.36
PCCB-213ENST00000475214 PRAMEF22A3QJZ6 481 aa12.8□□□□□ -0.36
PCCB-213ENST00000475214 DDX58O95786 925 aaKnown RBP12.8□□□□□ -0.36
PCCB-213ENST00000475214 SKAP1Q86WV1 359 aa12.8□□□□□ -0.36
PCCB-213ENST00000475214 TMOD3Q9NYL9 352 aa12.8□□□□□ -0.36
PCCB-213ENST00000475214 WNK3Q9BYP7 1800 aa12.8□□□□□ -0.36
PCCB-213ENST00000475214 N4BP2Q86UW6 1770 aaPredicted RBP12.79□□□□□ -0.36
PCCB-213ENST00000475214 ANKRD44Q8N8A2 993 aa12.79□□□□□ -0.36
PCCB-213ENST00000475214 DNAAF4Q8WXU2 420 aa12.79□□□□□ -0.36
PCCB-213ENST00000475214 MEIS3Q99687 375 aa12.79□□□□□ -0.36
PCCB-213ENST00000475214 SRCIN1Q9C0H9 1055 aa12.79□□□□□ -0.36
PCCB-213ENST00000475214 SPON1Q9HCB6 807 aa12.79□□□□□ -0.36
PCCB-213ENST00000475214 C5P01031 1676 aa12.79□□□□□ -0.36
PCCB-213ENST00000475214 TNS2Q63HR2 1409 aa12.79□□□□□ -0.36
PCCB-213ENST00000475214 PI4KAP2A4QPH2 592 aa12.78□□□□□ -0.36
PCCB-213ENST00000475214 KCNQ2O43526 872 aa12.78□□□□□ -0.36
PCCB-213ENST00000475214 ANXA1P04083 346 aa12.78□□□□□ -0.36
PCCB-213ENST00000475214 GNAI2P04899 355 aa12.78□□□□□ -0.36
PCCB-213ENST00000475214 YY1P25490 414 aa12.78□□□□□ -0.36
PCCB-213ENST00000475214 PDE4AP27815 886 aa12.78□□□□□ -0.36
PCCB-213ENST00000475214 KSR2Q6VAB6 950 aa12.78□□□□□ -0.36
PCCB-213ENST00000475214 PI4KAP1Q8N8J0 262 aa12.78□□□□□ -0.36
PCCB-213ENST00000475214 SBF2Q86WG5 1849 aa12.77□□□□□ -0.37
PCCB-213ENST00000475214 HMMRO75330 724 aa12.77□□□□□ -0.37
PCCB-213ENST00000475214 CEP85Q6P2H3 762 aa12.77□□□□□ -0.37
PCCB-213ENST00000475214 USP16Q9Y5T5 823 aa12.77□□□□□ -0.37
PCCB-213ENST00000475214 ERBB4Q15303 1308 aa12.77□□□□□ -0.37
PCCB-213ENST00000475214 PAPPAQ13219 1627 aa12.77□□□□□ -0.37
PCCB-213ENST00000475214 LAMB4A4D0S4 1761 aa12.76□□□□□ -0.37
PCCB-213ENST00000475214 NUCB1Q02818 461 aa12.76□□□□□ -0.37
PCCB-213ENST00000475214 PDIA6Q15084 440 aa12.76□□□□□ -0.37
PCCB-213ENST00000475214 PROSER3Q2NL68 480 aa12.76□□□□□ -0.37
PCCB-213ENST00000475214 SIRT2Q8IXJ6 389 aa12.76□□□□□ -0.37
PCCB-213ENST00000475214 BACH2Q9BYV9 841 aa12.76□□□□□ -0.37
PCCB-213ENST00000475214 PPP1R1BQ9UD71 204 aaPredicted RBP12.76□□□□□ -0.37
PCCB-213ENST00000475214 ZBTB47Q9UFB7 747 aaPredicted RBP12.76□□□□□ -0.37
PCCB-213ENST00000475214 MAP3K2Q9Y2U5 619 aa12.76□□□□□ -0.37
PCCB-213ENST00000475214 ATP10DQ9P241 1426 aa12.76□□□□□ -0.37
PCCB-213ENST00000475214 TOGARAM1Q9Y4F4 1720 aa12.76□□□□□ -0.37
PCCB-213ENST00000475214 UBR2Q8IWV8 1755 aa12.76□□□□□ -0.37
PCCB-213ENST00000475214 ADCY9O60503 1353 aa12.75□□□□□ -0.37
PCCB-213ENST00000475214 ALDH1L1O75891 902 aa12.75□□□□□ -0.37
PCCB-213ENST00000475214 UBTFL1P0CB47 393 aaPredicted RBP12.75□□□□□ -0.37
PCCB-213ENST00000475214 MYL6BP14649 208 aa12.75□□□□□ -0.37
PCCB-213ENST00000475214 AIMP1Q12904 312 aaKnown RBP12.75□□□□□ -0.37
PCCB-213ENST00000475214 FAM161AQ3B820 660 aa12.75□□□□□ -0.37
PCCB-213ENST00000475214 BEND3Q5T5X7 828 aa12.75□□□□□ -0.37
PCCB-213ENST00000475214 CASZ1Q86V15 1759 aa12.75□□□□□ -0.37
PCCB-213ENST00000475214 CHD1LQ86WJ1 897 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms