RNA–Protein interactions for RNA: ENST00000475035.5

SNRPE-205, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

TSL 1 (best)

Gene SNRPE, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-205ENST00000475035 FCHSD2O94868 740 aa11.53□□□□□ -0.56
SNRPE-205ENST00000475035 NEFMP07197 916 aa11.53□□□□□ -0.56
SNRPE-205ENST00000475035 DNAJC10Q8IXB1 793 aa11.53□□□□□ -0.56
SNRPE-205ENST00000475035 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
SNRPE-205ENST00000475035 RTF1Q92541 710 aaKnown RBP11.53□□□□□ -0.56
SNRPE-205ENST00000475035 CEMIPQ8WUJ3 1361 aa11.53□□□□□ -0.56
SNRPE-205ENST00000475035 GYS1P13807 737 aa11.52□□□□□ -0.57
SNRPE-205ENST00000475035 PHACTR3Q96KR7 559 aa11.52□□□□□ -0.57
SNRPE-205ENST00000475035 PARP3Q9Y6F1 533 aa11.52□□□□□ -0.57
SNRPE-205ENST00000475035 USP42Q9H9J4 1324 aaKnown RBP11.52□□□□□ -0.57
SNRPE-205ENST00000475035 COL15A1P39059 1388 aa11.52□□□□□ -0.57
SNRPE-205ENST00000475035 C10orf71Q711Q0 1435 aa11.52□□□□□ -0.57
SNRPE-205ENST00000475035 DLG5Q8TDM6 1919 aa11.51□□□□□ -0.57
SNRPE-205ENST00000475035 ZPR1O75312 459 aa11.51□□□□□ -0.57
SNRPE-205ENST00000475035 STARD3NLO95772 234 aa11.51□□□□□ -0.57
SNRPE-205ENST00000475035 CYP19A1P11511 503 aaPredicted RBP11.51□□□□□ -0.57
SNRPE-205ENST00000475035 YBX3P16989 372 aaKnown RBP eCLIP11.51□□□□□ -0.57
SNRPE-205ENST00000475035 INTS5Q6P9B9 1019 aaKnown RBP11.51□□□□□ -0.57
SNRPE-205ENST00000475035 ZNF790Q6PG37 636 aa11.51□□□□□ -0.57
SNRPE-205ENST00000475035 IL17REQ8NFR9 667 aa11.51□□□□□ -0.57
SNRPE-205ENST00000475035 SOS1Q07889 1333 aaPredicted RBP11.51□□□□□ -0.57
SNRPE-205ENST00000475035 N4BP2Q86UW6 1770 aaPredicted RBP11.51□□□□□ -0.57
SNRPE-205ENST00000475035 FMNL2Q96PY5 1086 aa11.5□□□□□ -0.57
SNRPE-205ENST00000475035 SRP68Q9UHB9 627 aaKnown RBP11.5□□□□□ -0.57
SNRPE-205ENST00000475035 ZBTB1Q9Y2K1 713 aa11.5□□□□□ -0.57
SNRPE-205ENST00000475035 HEG1Q9ULI3 1381 aa11.5□□□□□ -0.57
SNRPE-205ENST00000475035 KIAA1551Q9HCM1 1747 aa11.49□□□□□ -0.57
SNRPE-205ENST00000475035 BTBD11A6QL63 1104 aa11.49□□□□□ -0.57
SNRPE-205ENST00000475035 RALBP1Q15311 655 aa11.49□□□□□ -0.57
SNRPE-205ENST00000475035 ZNF784Q8NCA9 323 aaPredicted RBP11.49□□□□□ -0.57
SNRPE-205ENST00000475035 ZNF496Q96IT1 587 aaPredicted RBP11.49□□□□□ -0.57
SNRPE-205ENST00000475035 TEX13AQ9BXU3 409 aaPredicted RBP11.49□□□□□ -0.57
SNRPE-205ENST00000475035 PXDNLA1KZ92 1463 aa11.49□□□□□ -0.57
SNRPE-205ENST00000475035 HTATSF1O43719 755 aaKnown RBP11.48□□□□□ -0.57
SNRPE-205ENST00000475035 FKBP8Q14318 412 aa11.48□□□□□ -0.57
SNRPE-205ENST00000475035 MCM10Q7L590 875 aa11.48□□□□□ -0.57
SNRPE-205ENST00000475035 NPM2Q86SE8 214 aaKnown RBP11.48□□□□□ -0.57
SNRPE-205ENST00000475035 PNNQ9H307 717 aaKnown RBP11.48□□□□□ -0.57
SNRPE-205ENST00000475035 MAPK8IP3Q9UPT6 1336 aa11.48□□□□□ -0.57
SNRPE-205ENST00000475035 SCN7AQ01118 1682 aa11.48□□□□□ -0.57
SNRPE-205ENST00000475035 BRCA1P38398 1863 aaKnown RBP11.48□□□□□ -0.57
SNRPE-205ENST00000475035 A0A087WZG4 1122 aa11.47□□□□□ -0.57
SNRPE-205ENST00000475035 CANXP27824 592 aaKnown RBP11.47□□□□□ -0.57
SNRPE-205ENST00000475035 TGFB2P61812 414 aa11.47□□□□□ -0.57
SNRPE-205ENST00000475035 DDX10Q13206 875 aaKnown RBP11.47□□□□□ -0.57
SNRPE-205ENST00000475035 USPL1Q5W0Q7 1092 aa11.47□□□□□ -0.57
SNRPE-205ENST00000475035 NARFQ9UHQ1 456 aa11.47□□□□□ -0.57
SNRPE-205ENST00000475035 WWC3Q9ULE0 1092 aa11.47□□□□□ -0.57
SNRPE-205ENST00000475035 AFDNP55196 1824 aaKnown RBP11.46□□□□□ -0.57
SNRPE-205ENST00000475035 ZNF330Q9Y3S2 320 aaPredicted RBP11.46□□□□□ -0.57
SNRPE-205ENST00000475035 MYBBP1AQ9BQG0 1328 aaKnown RBP11.45□□□□□ -0.58
SNRPE-205ENST00000475035 ARFGEF1Q9Y6D6 1849 aa11.45□□□□□ -0.58
SNRPE-205ENST00000475035 DDR1Q08345 913 aa11.45□□□□□ -0.58
SNRPE-205ENST00000475035 DCTN1Q14203 1278 aa11.45□□□□□ -0.58
SNRPE-205ENST00000475035 LAMB4A4D0S4 1761 aa11.45□□□□□ -0.58
SNRPE-205ENST00000475035 BCORQ6W2J9 1755 aa11.44□□□□□ -0.58
SNRPE-205ENST00000475035 KDM3BQ7LBC6 1761 aa11.44□□□□□ -0.58
SNRPE-205ENST00000475035 NRXN2Q9P2S2 1712 aa11.44□□□□□ -0.58
SNRPE-205ENST00000475035 A0A0G2JLW4 131 aa11.44□□□□□ -0.58
SNRPE-205ENST00000475035 POLRMTO00411 1230 aaKnown RBP11.44□□□□□ -0.58
SNRPE-205ENST00000475035 KCNQ3O43525 872 aa11.44□□□□□ -0.58
SNRPE-205ENST00000475035 IL6STP40189 918 aaPredicted RBP11.44□□□□□ -0.58
SNRPE-205ENST00000475035 EIF5P55010 431 aaKnown RBP11.44□□□□□ -0.58
SNRPE-205ENST00000475035 NFE2L2Q16236 605 aa11.44□□□□□ -0.58
SNRPE-205ENST00000475035 BCS1LQ9Y276 419 aa11.44□□□□□ -0.58
SNRPE-205ENST00000475035 SNRPA1P09661 255 aaKnown RBP11.43□□□□□ -0.58
SNRPE-205ENST00000475035 DPEP1P16444 411 aa11.43□□□□□ -0.58
SNRPE-205ENST00000475035 TM4SF1P30408 202 aa11.43□□□□□ -0.58
SNRPE-205ENST00000475035 NFIXQ14938 502 aa11.43□□□□□ -0.58
SNRPE-205ENST00000475035 TAF7Q15545 349 aaPredicted RBP11.43□□□□□ -0.58
SNRPE-205ENST00000475035 PLEKHF1Q96S99 279 aa11.43□□□□□ -0.58
SNRPE-205ENST00000475035 PNISRQ8TF01 805 aaKnown RBP11.42□□□□□ -0.58
SNRPE-205ENST00000475035 ATP10DQ9P241 1426 aa11.42□□□□□ -0.58
SNRPE-205ENST00000475035 DLEC1Q9Y238 1755 aa11.41□□□□□ -0.58
SNRPE-205ENST00000475035 A1BGP04217 495 aa11.41□□□□□ -0.58
SNRPE-205ENST00000475035 ZEB1P37275 1124 aaPredicted RBP11.41□□□□□ -0.58
SNRPE-205ENST00000475035 WDR43Q15061 677 aaKnown RBP eCLIP11.41□□□□□ -0.58
SNRPE-205ENST00000475035 BCL2L12Q9HB09 334 aa11.41□□□□□ -0.58
SNRPE-205ENST00000475035 PIM2Q9P1W9 311 aa11.41□□□□□ -0.58
SNRPE-205ENST00000475035 TBC1D2BQ9UPU7 963 aa11.41□□□□□ -0.58
SNRPE-205ENST00000475035 ADCY9O60503 1353 aa11.41□□□□□ -0.58
SNRPE-205ENST00000475035 CARMIL3Q8ND23 1372 aa11.41□□□□□ -0.58
SNRPE-205ENST00000475035 NPHP1O15259 732 aa11.4□□□□□ -0.58
SNRPE-205ENST00000475035 GIGYF1O75420 1035 aaPredicted RBP11.4□□□□□ -0.58
SNRPE-205ENST00000475035 SERPINB2P05120 415 aa11.4□□□□□ -0.58
SNRPE-205ENST00000475035 LMOD3Q0VAK6 560 aa11.4□□□□□ -0.58
SNRPE-205ENST00000475035 DALRD3Q5D0E6 543 aaKnown RBP11.4□□□□□ -0.58
SNRPE-205ENST00000475035 BICDL1Q6ZP65 573 aa11.4□□□□□ -0.58
SNRPE-205ENST00000475035 DZIP3Q86Y13 1208 aaKnown RBP11.4□□□□□ -0.58
SNRPE-205ENST00000475035 PRAMEF22A3QJZ6 481 aa11.39□□□□□ -0.59
SNRPE-205ENST00000475035 CHRNA5P30532 468 aa11.39□□□□□ -0.59
SNRPE-205ENST00000475035 MKRN4PQ13434 485 aaPredicted RBP11.39□□□□□ -0.59
SNRPE-205ENST00000475035 ARHGAP27Q6ZUM4 889 aa11.39□□□□□ -0.59
SNRPE-205ENST00000475035 MIS18AQ9NYP9 233 aa11.39□□□□□ -0.59
SNRPE-205ENST00000475035 ZNF652Q9Y2D9 606 aa11.39□□□□□ -0.59
SNRPE-205ENST00000475035 USP16Q9Y5T5 823 aa11.39□□□□□ -0.59
SNRPE-205ENST00000475035 ANKRD31Q8N7Z5 1873 aa11.38□□□□□ -0.59
SNRPE-205ENST00000475035 CAMTA2O94983 1202 aa11.38□□□□□ -0.59
SNRPE-205ENST00000475035 KCNA3P22001 575 aa11.38□□□□□ -0.59
SNRPE-205ENST00000475035 PIP4K2AP48426 406 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms