RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 PI4KAP2A4QPH2 592 aa24.84■■□□□ 1.57
SSR1-204ENST00000474597 PROSER3Q2NL68 480 aa24.84■■□□□ 1.57
SSR1-204ENST00000474597 UNC5CLQ8IV45 518 aa24.84■■□□□ 1.57
SSR1-204ENST00000474597 SMC5Q8IY18 1101 aa24.84■■□□□ 1.57
SSR1-204ENST00000474597 PI4KAP1Q8N8J0 262 aa24.84■■□□□ 1.57
SSR1-204ENST00000474597 DNAAF4Q8WXU2 420 aa24.84■■□□□ 1.57
SSR1-204ENST00000474597 ITGB4P16144 1822 aa24.84■■□□□ 1.57
SSR1-204ENST00000474597 DDX58O95786 925 aaKnown RBP24.84■■□□□ 1.57
SSR1-204ENST00000474597 GNAI3P08754 354 aa24.84■■□□□ 1.57
SSR1-204ENST00000474597 KAT6BQ8WYB5 2073 aa24.83■■□□□ 1.57
SSR1-204ENST00000474597 DDB1Q16531 1140 aa24.83■■□□□ 1.57
SSR1-204ENST00000474597 RPAP2Q8IXW5 612 aaPredicted RBP24.83■■□□□ 1.57
SSR1-204ENST00000474597 GCC1Q96CN9 775 aa24.83■■□□□ 1.57
SSR1-204ENST00000474597 SRCIN1Q9C0H9 1055 aa24.83■■□□□ 1.57
SSR1-204ENST00000474597 USP16Q9Y5T5 823 aa24.83■■□□□ 1.57
SSR1-204ENST00000474597 LRP6O75581 1613 aa24.82■■□□□ 1.56
SSR1-204ENST00000474597 GNAI2P04899 355 aa24.81■■□□□ 1.56
SSR1-204ENST00000474597 MYL6BP14649 208 aa24.81■■□□□ 1.56
SSR1-204ENST00000474597 PDIA6Q15084 440 aa24.81■■□□□ 1.56
SSR1-204ENST00000474597 BARGINQ6ZT62 677 aa24.81■■□□□ 1.56
SSR1-204ENST00000474597 ANKRD44Q8N8A2 993 aa24.81■■□□□ 1.56
SSR1-204ENST00000474597 ADCY9O60503 1353 aa24.81■■□□□ 1.56
SSR1-204ENST00000474597 AIMP1Q12904 312 aaKnown RBP24.8■■□□□ 1.56
SSR1-204ENST00000474597 KSR2Q6VAB6 950 aa24.8■■□□□ 1.56
SSR1-204ENST00000474597 SIRT2Q8IXJ6 389 aa24.8■■□□□ 1.56
SSR1-204ENST00000474597 KCPQ6ZWJ8 1503 aa24.8■■□□□ 1.56
SSR1-204ENST00000474597 PTCD1O75127 700 aaKnown RBP24.79■■□□□ 1.56
SSR1-204ENST00000474597 CEP85Q6P2H3 762 aa24.79■■□□□ 1.56
SSR1-204ENST00000474597 GLI3P10071 1580 aa24.79■■□□□ 1.56
SSR1-204ENST00000474597 MAP3K2Q9Y2U5 619 aa24.79■■□□□ 1.56
SSR1-204ENST00000474597 ATP10DQ9P241 1426 aa24.78■■□□□ 1.56
SSR1-204ENST00000474597 PIGBQ92521 554 aa24.78■■□□□ 1.56
SSR1-204ENST00000474597 PDE4AP27815 886 aa24.77■■□□□ 1.56
SSR1-204ENST00000474597 BEND3Q5T5X7 828 aa24.77■■□□□ 1.56
SSR1-204ENST00000474597 MEX3CQ5U5Q3 659 aaKnown RBP24.77■■□□□ 1.56
SSR1-204ENST00000474597 ERBB4Q15303 1308 aa24.76■■□□□ 1.55
SSR1-204ENST00000474597 HMMRO75330 724 aa24.76■■□□□ 1.55
SSR1-204ENST00000474597 UBTFL1P0CB47 393 aaPredicted RBP24.76■■□□□ 1.55
SSR1-204ENST00000474597 HSPA1LP34931 641 aa24.76■■□□□ 1.55
SSR1-204ENST00000474597 VPS72Q15906 364 aa24.76■■□□□ 1.55
SSR1-204ENST00000474597 SYTL4Q96C24 671 aaPredicted RBP24.76■■□□□ 1.55
SSR1-204ENST00000474597 NUCB1Q02818 461 aa24.75■■□□□ 1.55
SSR1-204ENST00000474597 RIC3Q7Z5B4 369 aa24.75■■□□□ 1.55
SSR1-204ENST00000474597 XAGE3Q8WTP9 111 aa24.75■■□□□ 1.55
SSR1-204ENST00000474597 DOT1LQ8TEK3 1739 aa24.75■■□□□ 1.55
SSR1-204ENST00000474597 BCL9LQ86UU0 1499 aa24.75■■□□□ 1.55
SSR1-204ENST00000474597 FNBP4Q8N3X1 1017 aaPredicted RBP24.75■■□□□ 1.55
SSR1-204ENST00000474597 USP44Q9H0E7 712 aa24.75■■□□□ 1.55
SSR1-204ENST00000474597 ANKRD45Q5TZF3 282 aa24.74■■□□□ 1.55
SSR1-204ENST00000474597 COPS6Q7L5N1 327 aa24.74■■□□□ 1.55
SSR1-204ENST00000474597 ASAP1Q9ULH1 1129 aa24.74■■□□□ 1.55
SSR1-204ENST00000474597 BCL9O00512 1426 aa24.73■■□□□ 1.55
SSR1-204ENST00000474597 ALDH1L1O75891 902 aa24.73■■□□□ 1.55
SSR1-204ENST00000474597 BACH2Q9BYV9 841 aa24.73■■□□□ 1.55
SSR1-204ENST00000474597 USP21Q9UK80 565 aa24.73■■□□□ 1.55
SSR1-204ENST00000474597 PIP4K2AP48426 406 aaPredicted RBP24.72■■□□□ 1.55
SSR1-204ENST00000474597 CHD1LQ86WJ1 897 aa24.72■■□□□ 1.55
SSR1-204ENST00000474597 DCTPP1Q9H773 170 aa24.72■■□□□ 1.55
SSR1-204ENST00000474597 ATG3Q9NT62 314 aa24.72■■□□□ 1.55
SSR1-204ENST00000474597 ZBTB47Q9UFB7 747 aaPredicted RBP24.72■■□□□ 1.55
SSR1-204ENST00000474597 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.72■■□□□ 1.55
SSR1-204ENST00000474597 FAM161AQ3B820 660 aa24.72■■□□□ 1.55
SSR1-204ENST00000474597 TEX13AQ9BXU3 409 aaPredicted RBP24.72■■□□□ 1.55
SSR1-204ENST00000474597 NEXNQ0ZGT2 675 aa24.71■■□□□ 1.55
SSR1-204ENST00000474597 FAM98CQ17RN3 349 aaKnown RBP24.71■■□□□ 1.55
SSR1-204ENST00000474597 RBM42Q9BTD8 480 aaKnown RBP24.71■■□□□ 1.55
SSR1-204ENST00000474597 LNPKQ9C0E8 428 aa24.71■■□□□ 1.55
SSR1-204ENST00000474597 LRRFIP2Q9Y608 721 aaKnown RBP24.71■■□□□ 1.55
SSR1-204ENST00000474597 PRIM1P49642 420 aaKnown RBP24.7■■□□□ 1.55
SSR1-204ENST00000474597 VSIG10Q8N0Z9 540 aa24.7■■□□□ 1.55
SSR1-204ENST00000474597 A0A0G2JS52 829 aa24.7■■□□□ 1.54
SSR1-204ENST00000474597 ANKRD13DQ6ZTN6 518 aa24.7■■□□□ 1.54
SSR1-204ENST00000474597 LRP10Q7Z4F1 713 aa24.7■■□□□ 1.54
SSR1-204ENST00000474597 LINS1Q8NG48 757 aa24.7■■□□□ 1.54
SSR1-204ENST00000474597 C9orf78Q9NZ63 289 aaPredicted RBP24.7■■□□□ 1.54
SSR1-204ENST00000474597 MARCH10Q8NA82 808 aaPredicted RBP24.69■■□□□ 1.54
SSR1-204ENST00000474597 HDAC5Q9UQL6 1122 aa24.69■■□□□ 1.54
SSR1-204ENST00000474597 ATP8B2P98198 1209 aa24.68■■□□□ 1.54
SSR1-204ENST00000474597 MYT1Q01538 1121 aa24.68■■□□□ 1.54
SSR1-204ENST00000474597 A1BGP04217 495 aa24.67■■□□□ 1.54
SSR1-204ENST00000474597 METTL22Q9BUU2 404 aaPredicted RBP24.67■■□□□ 1.54
SSR1-204ENST00000474597 NBPF26B4DH59 902 aa24.66■■□□□ 1.54
SSR1-204ENST00000474597 CWF19L2Q2TBE0 894 aaKnown RBP24.66■■□□□ 1.54
SSR1-204ENST00000474597 NBPF14Q5TI25 921 aa24.66■■□□□ 1.54
SSR1-204ENST00000474597 NBPF10Q6P3W6 841 aaKnown RBP24.66■■□□□ 1.54
SSR1-204ENST00000474597 NBPF15Q8N660 670 aa24.66■■□□□ 1.54
SSR1-204ENST00000474597 ARFGEF2Q9Y6D5 1785 aa24.66■■□□□ 1.54
SSR1-204ENST00000474597 STARD3NLO95772 234 aa24.65■■□□□ 1.54
SSR1-204ENST00000474597 NBPF7P0C2Y1 421 aaPredicted RBP24.65■■□□□ 1.54
SSR1-204ENST00000474597 ACSBG1Q96GR2 724 aa24.65■■□□□ 1.54
SSR1-204ENST00000474597 PLBD2Q8NHP8 589 aa24.65■■□□□ 1.54
SSR1-204ENST00000474597 MYD88Q99836 296 aa24.65■■□□□ 1.54
SSR1-204ENST00000474597 DNAJC10Q8IXB1 793 aa24.64■■□□□ 1.54
SSR1-204ENST00000474597 C8orf34Q49A92 452 aa24.63■■□□□ 1.53
SSR1-204ENST00000474597 AFDNP55196 1824 aaKnown RBP24.63■■□□□ 1.53
SSR1-204ENST00000474597 PNMA6EA0A0J9YXQ4 647 aa24.62■■□□□ 1.53
SSR1-204ENST00000474597 GRM8O00222 908 aa24.62■■□□□ 1.53
SSR1-204ENST00000474597 IGKV5-2P06315 115 aa24.61■■□□□ 1.53
SSR1-204ENST00000474597 NEURL1BA8MQ27 555 aa24.61■■□□□ 1.53
SSR1-204ENST00000474597 APBB1O00213 710 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms