RNA–Protein interactions for RNA: ENST00000474586.5

TRA2A-204, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 868 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-204ENST00000474586 BCS1LQ9Y276 419 aa28.36■■■□□ 2.13
TRA2A-204ENST00000474586 CANXP27824 592 aaKnown RBP28.35■■■□□ 2.13
TRA2A-204ENST00000474586 TM4SF1P30408 202 aa28.35■■■□□ 2.13
TRA2A-204ENST00000474586 ZNF790Q6PG37 636 aa28.35■■■□□ 2.13
TRA2A-204ENST00000474586 ZNF496Q96IT1 587 aaPredicted RBP28.35■■■□□ 2.13
TRA2A-204ENST00000474586 COL15A1P39059 1388 aa28.35■■■□□ 2.13
TRA2A-204ENST00000474586 NARFQ9UHQ1 456 aa28.34■■■□□ 2.13
TRA2A-204ENST00000474586 SIPA1L3O60292 1781 aaPredicted RBP28.34■■■□□ 2.13
TRA2A-204ENST00000474586 POLRMTO00411 1230 aaKnown RBP28.33■■■□□ 2.13
TRA2A-204ENST00000474586 STARD3NLO95772 234 aa28.33■■■□□ 2.13
TRA2A-204ENST00000474586 KCNA3P22001 575 aa28.32■■■□□ 2.12
TRA2A-204ENST00000474586 ADCY9O60503 1353 aa28.32■■■□□ 2.12
TRA2A-204ENST00000474586 CEMIPQ8WUJ3 1361 aa28.32■■■□□ 2.12
TRA2A-204ENST00000474586 HEG1Q9ULI3 1381 aa28.31■■■□□ 2.12
TRA2A-204ENST00000474586 FCHSD2O94868 740 aa28.3■■■□□ 2.12
TRA2A-204ENST00000474586 BCL2L12Q9HB09 334 aa28.3■■■□□ 2.12
TRA2A-204ENST00000474586 KCNQ3O43525 872 aa28.29■■■□□ 2.12
TRA2A-204ENST00000474586 NFIXQ14938 502 aa28.29■■■□□ 2.12
TRA2A-204ENST00000474586 ZNF526Q8TF50 670 aaPredicted RBP28.29■■■□□ 2.12
TRA2A-204ENST00000474586 BTBD11A6QL63 1104 aa28.28■■■□□ 2.12
TRA2A-204ENST00000474586 ARHGAP27Q6ZUM4 889 aa28.28■■■□□ 2.12
TRA2A-204ENST00000474586 FMNL2Q96PY5 1086 aa28.28■■■□□ 2.12
TRA2A-204ENST00000474586 TEX13AQ9BXU3 409 aaPredicted RBP28.28■■■□□ 2.12
TRA2A-204ENST00000474586 EIF5P55010 431 aaKnown RBP28.27■■■□□ 2.12
TRA2A-204ENST00000474586 GPBP1L1Q9HC44 474 aaPredicted RBP28.27■■■□□ 2.12
TRA2A-204ENST00000474586 BRCA1P38398 1863 aaKnown RBP28.27■■■□□ 2.12
TRA2A-204ENST00000474586 CHRNA5P30532 468 aa28.26■■■□□ 2.11
TRA2A-204ENST00000474586 MCM10Q7L590 875 aa28.26■■■□□ 2.11
TRA2A-204ENST00000474586 PIM2Q9P1W9 311 aa28.26■■■□□ 2.11
TRA2A-204ENST00000474586 SENP3-EIF4A1A0A087X0R7 540 aa28.25■■■□□ 2.11
TRA2A-204ENST00000474586 RTF1Q92541 710 aaKnown RBP28.25■■■□□ 2.11
TRA2A-204ENST00000474586 A0A087WZG4 1122 aa28.24■■■□□ 2.11
TRA2A-204ENST00000474586 DCTN1Q14203 1278 aa28.23■■■□□ 2.11
TRA2A-204ENST00000474586 ZNF330Q9Y3S2 320 aaPredicted RBP28.23■■■□□ 2.11
TRA2A-204ENST00000474586 AFDNP55196 1824 aaKnown RBP28.22■■■□□ 2.11
TRA2A-204ENST00000474586 A1BGP04217 495 aa28.22■■■□□ 2.11
TRA2A-204ENST00000474586 SERPINB2P05120 415 aa28.22■■■□□ 2.11
TRA2A-204ENST00000474586 DALRD3Q5D0E6 543 aaKnown RBP28.22■■■□□ 2.11
TRA2A-204ENST00000474586 BICDL1Q6ZP65 573 aa28.21■■■□□ 2.11
TRA2A-204ENST00000474586 TBC1D2BQ9UPU7 963 aa28.2■■■□□ 2.1
TRA2A-204ENST00000474586 IL6STP40189 918 aaPredicted RBP28.19■■■□□ 2.1
TRA2A-204ENST00000474586 ARFGEF1Q9Y6D6 1849 aa28.19■■■□□ 2.1
TRA2A-204ENST00000474586 NRXN2Q9P2S2 1712 aa28.18■■■□□ 2.1
TRA2A-204ENST00000474586 HTATSF1O43719 755 aaKnown RBP28.18■■■□□ 2.1
TRA2A-204ENST00000474586 USP16Q9Y5T5 823 aa28.18■■■□□ 2.1
TRA2A-204ENST00000474586 PRAMEF22A3QJZ6 481 aa28.17■■■□□ 2.1
TRA2A-204ENST00000474586 TBC1D9BQ66K14 1250 aa28.17■■■□□ 2.1
TRA2A-204ENST00000474586 NPM2Q86SE8 214 aaKnown RBP28.15■■■□□ 2.1
TRA2A-204ENST00000474586 SNRPA1P09661 255 aaKnown RBP28.14■■■□□ 2.1
TRA2A-204ENST00000474586 PIP4K2AP48426 406 aaPredicted RBP28.14■■■□□ 2.1
TRA2A-204ENST00000474586 CARMIL3Q8ND23 1372 aa28.13■■■□□ 2.09
TRA2A-204ENST00000474586 NEFMP07197 916 aa28.13■■■□□ 2.09
TRA2A-204ENST00000474586 TAF7Q15545 349 aaPredicted RBP28.13■■■□□ 2.09
TRA2A-204ENST00000474586 C9orf131Q5VYM1 1079 aa28.13■■■□□ 2.09
TRA2A-204ENST00000474586 SCN7AQ01118 1682 aa28.13■■■□□ 2.09
TRA2A-204ENST00000474586 CAMTA2O94983 1202 aa28.12■■■□□ 2.09
TRA2A-204ENST00000474586 C2CD5Q86YS7 1000 aa28.12■■■□□ 2.09
TRA2A-204ENST00000474586 PLEKHF1Q96S99 279 aa28.12■■■□□ 2.09
TRA2A-204ENST00000474586 MIS18AQ9NYP9 233 aa28.12■■■□□ 2.09
TRA2A-204ENST00000474586 KIF3CO14782 793 aa28.1■■■□□ 2.09
TRA2A-204ENST00000474586 DZIP3Q86Y13 1208 aaKnown RBP28.1■■■□□ 2.09
TRA2A-204ENST00000474586 CCDC24Q8N4L8 307 aa28.09■■■□□ 2.09
TRA2A-204ENST00000474586 DLG5Q8TDM6 1919 aa28.09■■■□□ 2.09
TRA2A-204ENST00000474586 H0YIN7 160 aa28.08■■■□□ 2.09
TRA2A-204ENST00000474586 NFE2L2Q16236 605 aa28.07■■■□□ 2.08
TRA2A-204ENST00000474586 PRR5LQ6MZQ0 368 aa28.07■■■□□ 2.08
TRA2A-204ENST00000474586 TTLL6Q8N841 843 aa28.07■■■□□ 2.08
TRA2A-204ENST00000474586 SETDB2Q96T68 719 aa28.07■■■□□ 2.08
TRA2A-204ENST00000474586 DLEC1Q9Y238 1755 aa28.06■■■□□ 2.08
TRA2A-204ENST00000474586 DDX10Q13206 875 aaKnown RBP28.06■■■□□ 2.08
TRA2A-204ENST00000474586 RNF181Q9P0P0 153 aa28.06■■■□□ 2.08
TRA2A-204ENST00000474586 NBPF26B4DH59 902 aa28.05■■■□□ 2.08
TRA2A-204ENST00000474586 RALBP1Q15311 655 aa28.05■■■□□ 2.08
TRA2A-204ENST00000474586 NBPF10Q6P3W6 841 aaKnown RBP28.05■■■□□ 2.08
TRA2A-204ENST00000474586 NBPF15Q8N660 670 aa28.05■■■□□ 2.08
TRA2A-204ENST00000474586 THUMPD2Q9BTF0 503 aaKnown RBP28.05■■■□□ 2.08
TRA2A-204ENST00000474586 BRIP1Q9BX63 1249 aa28.04■■■□□ 2.08
TRA2A-204ENST00000474586 PNNQ9H307 717 aaKnown RBP28.04■■■□□ 2.08
TRA2A-204ENST00000474586 ANKRD31Q8N7Z5 1873 aa28.04■■■□□ 2.08
TRA2A-204ENST00000474586 BCORQ6W2J9 1755 aa28.04■■■□□ 2.08
TRA2A-204ENST00000474586 MAPK8IP3Q9UPT6 1336 aa28.03■■■□□ 2.08
TRA2A-204ENST00000474586 NMRK2Q9NPI5 230 aa28.03■■■□□ 2.08
TRA2A-204ENST00000474586 PDE6BP35913 854 aa28.02■■■□□ 2.08
TRA2A-204ENST00000474586 RASSF7Q02833 373 aa28.02■■■□□ 2.08
TRA2A-204ENST00000474586 PNISRQ8TF01 805 aaKnown RBP28.02■■■□□ 2.08
TRA2A-204ENST00000474586 SBF1O95248 1867 aa28.02■■■□□ 2.08
TRA2A-204ENST00000474586 CNBD1Q8NA66 436 aa28.01■■■□□ 2.07
TRA2A-204ENST00000474586 ZNF622Q969S3 477 aaKnown RBP eCLIP28.01■■■□□ 2.075e-11■■■□□ 15
TRA2A-204ENST00000474586 NPHP1O15259 732 aa28■■■□□ 2.07
TRA2A-204ENST00000474586 CLEC4GQ6UXB4 293 aa28■■■□□ 2.07
TRA2A-204ENST00000474586 PDZRN3Q9UPQ7 1066 aa28■■■□□ 2.07
TRA2A-204ENST00000474586 KDM3BQ7LBC6 1761 aa27.99■■■□□ 2.07
TRA2A-204ENST00000474586 EIF4A1P60842 406 aaKnown RBP27.98■■■□□ 2.07
TRA2A-204ENST00000474586 ZNF652Q9Y2D9 606 aa27.98■■■□□ 2.07
TRA2A-204ENST00000474586 HSPA6P17066 643 aa27.97■■■□□ 2.07
TRA2A-204ENST00000474586 PRELPP51888 382 aa27.97■■■□□ 2.07
TRA2A-204ENST00000474586 ST5P78524 1137 aa27.97■■■□□ 2.07
TRA2A-204ENST00000474586 COL11A2P13942 1736 aaPredicted RBP27.96■■■□□ 2.07
TRA2A-204ENST00000474586 ZNF219Q9P2Y4 722 aaPredicted RBP27.96■■■□□ 2.07
TRA2A-204ENST00000474586 LMNB1P20700 586 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms