RNA–Protein interactions for RNA: ENST00000474377.5

SSR2-208, Transcript of signal sequence receptor subunit 2, human

TSL 5

Gene SSR2, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR2-208	ENST00000474377	WDR43	Q15061	677 aa	Known RBP eCLIP	11.56	□□□□□ -0.56
SSR2-208	ENST00000474377	TRAPPC3L	Q5T215	181 aa		11.56	□□□□□ -0.56
SSR2-208	ENST00000474377	SMIM5	Q71RC9	77 aa		11.56	□□□□□ -0.56
SSR2-208	ENST00000474377	PELP1	Q8IZL8	1130 aa	Known RBP	11.56	□□□□□ -0.56
SSR2-208	ENST00000474377	VSIG10	Q8N0Z9	540 aa		11.56	□□□□□ -0.56
SSR2-208	ENST00000474377	MIER1	Q8N108	512 aa		11.56	□□□□□ -0.56
SSR2-208	ENST00000474377	TJP1	Q07157	1748 aa		11.55	□□□□□ -0.56
SSR2-208	ENST00000474377	SENP3-EIF4A1	A0A087X0R7	540 aa		11.55	□□□□□ -0.56
SSR2-208	ENST00000474377	HTATSF1	O43719	755 aa	Known RBP	11.55	□□□□□ -0.56
SSR2-208	ENST00000474377	RPS6KA4	O75676	772 aa		11.55	□□□□□ -0.56
SSR2-208	ENST00000474377	RFC4	P35249	363 aa		11.54	□□□□□ -0.56
SSR2-208	ENST00000474377	C1QTNF8	P60827	252 aa		11.54	□□□□□ -0.56
SSR2-208	ENST00000474377	MCM10	Q7L590	875 aa		11.54	□□□□□ -0.56
SSR2-208	ENST00000474377	NLGN1	Q8N2Q7	840 aa		11.54	□□□□□ -0.56
SSR2-208	ENST00000474377	SLC4A9	Q96Q91	983 aa		11.54	□□□□□ -0.56
SSR2-208	ENST00000474377	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.54	□□□□□ -0.56
SSR2-208	ENST00000474377	CD2AP	Q9Y5K6	639 aa		11.54	□□□□□ -0.56
SSR2-208	ENST00000474377	SIPA1L3	O60292	1781 aa	Predicted RBP	11.54	□□□□□ -0.56
SSR2-208	ENST00000474377	ADAMTS7	Q9UKP4	1686 aa		11.53	□□□□□ -0.56
SSR2-208	ENST00000474377	ECM2	O94769	699 aa	Predicted RBP	11.53	□□□□□ -0.56
SSR2-208	ENST00000474377	STARD3NL	O95772	234 aa		11.53	□□□□□ -0.56
SSR2-208	ENST00000474377	CRKL	P46109	303 aa	Known RBP	11.53	□□□□□ -0.56
SSR2-208	ENST00000474377	DCTN1	Q14203	1278 aa		11.53	□□□□□ -0.56
SSR2-208	ENST00000474377	DNAJC10	Q8IXB1	793 aa		11.53	□□□□□ -0.56
SSR2-208	ENST00000474377	CCDC146	Q8IYE0	955 aa		11.53	□□□□□ -0.56
SSR2-208	ENST00000474377	MYH14	Q7Z406	1995 aa	Known RBP	11.53	□□□□□ -0.56
SSR2-208	ENST00000474377	CEMIP	Q8WUJ3	1361 aa		11.53	□□□□□ -0.56
SSR2-208	ENST00000474377	BTBD11	A6QL63	1104 aa		11.52	□□□□□ -0.57
SSR2-208	ENST00000474377	ZNF790	Q6PG37	636 aa		11.52	□□□□□ -0.57
SSR2-208	ENST00000474377	IL17RE	Q8NFR9	667 aa		11.52	□□□□□ -0.57
SSR2-208	ENST00000474377	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.52	□□□□□ -0.57
SSR2-208	ENST00000474377	CCDC87	Q9NVE4	849 aa		11.52	□□□□□ -0.57
SSR2-208	ENST00000474377	SSUH2	Q9Y2M2	353 aa		11.52	□□□□□ -0.57
SSR2-208	ENST00000474377	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.52	□□□□□ -0.57
SSR2-208	ENST00000474377	CIC	Q96RK0	1608 aa	Predicted RBP	11.52	□□□□□ -0.57
SSR2-208	ENST00000474377	UBR2	Q8IWV8	1755 aa		11.51	□□□□□ -0.57
SSR2-208	ENST00000474377	AMIGO3	Q86WK7	504 aa		11.51	□□□□□ -0.57
SSR2-208	ENST00000474377	ARHGEF1	Q92888	912 aa	Known RBP	11.51	□□□□□ -0.57
SSR2-208	ENST00000474377	FMNL2	Q96PY5	1086 aa		11.51	□□□□□ -0.57
SSR2-208	ENST00000474377	C4A	P0C0L4	1744 aa		11.51	□□□□□ -0.57
SSR2-208	ENST00000474377	KCP	Q6ZWJ8	1503 aa		11.5	□□□□□ -0.57
SSR2-208	ENST00000474377	ANP32C	O43423	234 aa		11.5	□□□□□ -0.57
SSR2-208	ENST00000474377	NEUROD2	Q15784	382 aa		11.5	□□□□□ -0.57
SSR2-208	ENST00000474377	NFE2L2	Q16236	605 aa		11.5	□□□□□ -0.57
SSR2-208	ENST00000474377	NPM2	Q86SE8	214 aa	Known RBP	11.5	□□□□□ -0.57
SSR2-208	ENST00000474377	ZPR1	O75312	459 aa		11.49	□□□□□ -0.57
SSR2-208	ENST00000474377	MMP10	P09238	476 aa		11.49	□□□□□ -0.57
SSR2-208	ENST00000474377	CYP19A1	P11511	503 aa	Predicted RBP	11.49	□□□□□ -0.57
SSR2-208	ENST00000474377	CANX	P27824	592 aa	Known RBP	11.49	□□□□□ -0.57
SSR2-208	ENST00000474377	PNISR	Q8TF01	805 aa	Known RBP	11.49	□□□□□ -0.57
SSR2-208	ENST00000474377	RRP7A	Q9Y3A4	280 aa	Known RBP	11.49	□□□□□ -0.57
SSR2-208	ENST00000474377	HEG1	Q9ULI3	1381 aa		11.49	□□□□□ -0.57
SSR2-208	ENST00000474377		A0A087WZG4	1122 aa		11.48	□□□□□ -0.57
SSR2-208	ENST00000474377	KCNQ3	O43525	872 aa		11.48	□□□□□ -0.57
SSR2-208	ENST00000474377	LMOD3	Q0VAK6	560 aa		11.48	□□□□□ -0.57
SSR2-208	ENST00000474377	INTS5	Q6P9B9	1019 aa	Known RBP	11.48	□□□□□ -0.57
SSR2-208	ENST00000474377	ZNF496	Q96IT1	587 aa	Predicted RBP	11.48	□□□□□ -0.57
SSR2-208	ENST00000474377	THUMPD2	Q9BTF0	503 aa	Known RBP	11.48	□□□□□ -0.57
SSR2-208	ENST00000474377	PARP3	Q9Y6F1	533 aa		11.48	□□□□□ -0.57
SSR2-208	ENST00000474377	SOS1	Q07889	1333 aa	Predicted RBP	11.48	□□□□□ -0.57
SSR2-208	ENST00000474377	USP42	Q9H9J4	1324 aa	Known RBP	11.48	□□□□□ -0.57
SSR2-208	ENST00000474377	GYS1	P13807	737 aa		11.47	□□□□□ -0.57
SSR2-208	ENST00000474377	RIPK4	P57078	832 aa		11.47	□□□□□ -0.57
SSR2-208	ENST00000474377	PLEKHF1	Q96S99	279 aa		11.47	□□□□□ -0.57
SSR2-208	ENST00000474377	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.47	□□□□□ -0.57
SSR2-208	ENST00000474377	MIS18A	Q9NYP9	233 aa		11.47	□□□□□ -0.57
SSR2-208	ENST00000474377	SRP68	Q9UHB9	627 aa	Known RBP	11.47	□□□□□ -0.57
SSR2-208	ENST00000474377	COL15A1	P39059	1388 aa		11.46	□□□□□ -0.57
SSR2-208	ENST00000474377	SNRPA1	P09661	255 aa	Known RBP	11.46	□□□□□ -0.57
SSR2-208	ENST00000474377	TAF7	Q15545	349 aa	Predicted RBP	11.46	□□□□□ -0.57
SSR2-208	ENST00000474377	WWC3	Q9ULE0	1092 aa		11.46	□□□□□ -0.57
SSR2-208	ENST00000474377	ZBTB1	Q9Y2K1	713 aa		11.46	□□□□□ -0.57
SSR2-208	ENST00000474377	LAS1L	Q9Y4W2	734 aa	Known RBP	11.46	□□□□□ -0.57
SSR2-208	ENST00000474377	IL6ST	P40189	918 aa	Predicted RBP	11.45	□□□□□ -0.58
SSR2-208	ENST00000474377	TGFB2	P61812	414 aa		11.45	□□□□□ -0.58
SSR2-208	ENST00000474377	CACNB1	Q02641	598 aa	Predicted RBP	11.45	□□□□□ -0.58
SSR2-208	ENST00000474377	NLGN2	Q8NFZ4	835 aa		11.45	□□□□□ -0.58
SSR2-208	ENST00000474377	RUNDC1	Q96C34	613 aa		11.45	□□□□□ -0.58
SSR2-208	ENST00000474377	NARF	Q9UHQ1	456 aa		11.45	□□□□□ -0.58
SSR2-208	ENST00000474377	ADAMTS8	Q9UP79	889 aa		11.45	□□□□□ -0.58
SSR2-208	ENST00000474377	KDM3B	Q7LBC6	1761 aa		11.44	□□□□□ -0.58
SSR2-208	ENST00000474377	TMPO	P42166	694 aa	Known RBP	11.44	□□□□□ -0.58
SSR2-208	ENST00000474377	USPL1	Q5W0Q7	1092 aa		11.44	□□□□□ -0.58
SSR2-208	ENST00000474377	MRS2	Q9HD23	443 aa		11.44	□□□□□ -0.58
SSR2-208	ENST00000474377	TSPYL4	Q9UJ04	414 aa		11.44	□□□□□ -0.58
SSR2-208	ENST00000474377	UTRN	P46939	3433 aa		11.44	□□□□□ -0.58
SSR2-208	ENST00000474377	LAMB4	A4D0S4	1761 aa		11.44	□□□□□ -0.58
SSR2-208	ENST00000474377	A1BG	P04217	495 aa		11.43	□□□□□ -0.58
SSR2-208	ENST00000474377	PIP4K2A	P48426	406 aa	Predicted RBP	11.43	□□□□□ -0.58
SSR2-208	ENST00000474377	EIF5	P55010	431 aa	Known RBP	11.43	□□□□□ -0.58
SSR2-208	ENST00000474377	BABAM1	Q9NWV8	329 aa		11.43	□□□□□ -0.58
SSR2-208	ENST00000474377	C10orf71	Q711Q0	1435 aa		11.43	□□□□□ -0.58
SSR2-208	ENST00000474377	ATP10D	Q9P241	1426 aa		11.43	□□□□□ -0.58
SSR2-208	ENST00000474377	PRAMEF22	A3QJZ6	481 aa		11.42	□□□□□ -0.58
SSR2-208	ENST00000474377	NPHP1	O15259	732 aa		11.42	□□□□□ -0.58
SSR2-208	ENST00000474377	BICDL1	Q6ZP65	573 aa		11.42	□□□□□ -0.58
SSR2-208	ENST00000474377	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.42	□□□□□ -0.58
SSR2-208	ENST00000474377	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.42	□□□□□ -0.58
SSR2-208	ENST00000474377	KIF13B	Q9NQT8	1826 aa		11.42	□□□□□ -0.58
SSR2-208	ENST00000474377	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms