RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 DCDC2BA2VCK2 349 aa8.27□□□□□ -1.09
TMEM50B-208ENST00000474272 NEURL1BA8MQ27 555 aa8.27□□□□□ -1.09
TMEM50B-208ENST00000474272 HOXB4P17483 251 aaPredicted RBP8.27□□□□□ -1.09
TMEM50B-208ENST00000474272 ZNF295-AS1Q8N0V1 137 aa8.27□□□□□ -1.09
TMEM50B-208ENST00000474272 MKL2Q9ULH7 1088 aa8.27□□□□□ -1.09
TMEM50B-208ENST00000474272 COG6Q9Y2V7 657 aa8.27□□□□□ -1.09
TMEM50B-208ENST00000474272 PCDHGC4Q9Y5F7 938 aa8.27□□□□□ -1.09
TMEM50B-208ENST00000474272 PCDHGA11Q9Y5H2 935 aa8.27□□□□□ -1.09
TMEM50B-208ENST00000474272 A6NJY4 79 aa8.26□□□□□ -1.09
TMEM50B-208ENST00000474272 ATXN7O15265 892 aaPredicted RBP8.26□□□□□ -1.09
TMEM50B-208ENST00000474272 CD33P20138 364 aa8.26□□□□□ -1.09
TMEM50B-208ENST00000474272 LINC00114Q6XXX2 140 aa8.26□□□□□ -1.09
TMEM50B-208ENST00000474272 POM121Q96HA1 1249 aa8.26□□□□□ -1.09
TMEM50B-208ENST00000474272 CABP1Q9NZU7 370 aa8.26□□□□□ -1.09
TMEM50B-208ENST00000474272 IQSEC3Q9UPP2 1182 aaPredicted RBP8.26□□□□□ -1.09
TMEM50B-208ENST00000474272 MAPTP10636 758 aaKnown RBP8.25□□□□□ -1.09
TMEM50B-208ENST00000474272 SKIP12755 728 aa8.25□□□□□ -1.09
TMEM50B-208ENST00000474272 GRIN2CQ14957 1233 aa8.25□□□□□ -1.09
TMEM50B-208ENST00000474272 BTBD6Q96KE9 485 aa8.25□□□□□ -1.09
TMEM50B-208ENST00000474272 SLC4A9Q96Q91 983 aa8.25□□□□□ -1.09
TMEM50B-208ENST00000474272 KLF15Q9UIH9 416 aa8.25□□□□□ -1.09
TMEM50B-208ENST00000474272 CDK2AP1O14519 115 aa8.24□□□□□ -1.09
TMEM50B-208ENST00000474272 KHNYNO15037 678 aaKnown RBP8.24□□□□□ -1.09
TMEM50B-208ENST00000474272 EPXP11678 715 aa8.24□□□□□ -1.09
TMEM50B-208ENST00000474272 TNP2Q05952 138 aa8.24□□□□□ -1.09
TMEM50B-208ENST00000474272 FIGNL1Q6PIW4 674 aa8.24□□□□□ -1.09
TMEM50B-208ENST00000474272 SLCO4C1Q6ZQN7 724 aa8.24□□□□□ -1.09
TMEM50B-208ENST00000474272 NLRP8Q86W28 1048 aa8.24□□□□□ -1.09
TMEM50B-208ENST00000474272 DEPDC4Q8N2C3 294 aa8.24□□□□□ -1.09
TMEM50B-208ENST00000474272 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.24□□□□□ -1.09
TMEM50B-208ENST00000474272 ZIC5Q96T25 663 aa8.24□□□□□ -1.09
TMEM50B-208ENST00000474272 MTFR1Q15390 333 aa8.23□□□□□ -1.09
TMEM50B-208ENST00000474272 TBCELQ5QJ74 424 aa8.23□□□□□ -1.09
TMEM50B-208ENST00000474272 ADAM23O75077 832 aa8.22□□□□□ -1.09
TMEM50B-208ENST00000474272 ARAFP10398 606 aa8.22□□□□□ -1.09
TMEM50B-208ENST00000474272 SOX11P35716 441 aa8.22□□□□□ -1.09
TMEM50B-208ENST00000474272 TXLNAP40222 546 aa8.22□□□□□ -1.09
TMEM50B-208ENST00000474272 PCBP4P57723 403 aaKnown RBP8.22□□□□□ -1.09
TMEM50B-208ENST00000474272 GTF2IP78347 998 aa8.22□□□□□ -1.09
TMEM50B-208ENST00000474272 PSME1Q06323 249 aa8.22□□□□□ -1.09
TMEM50B-208ENST00000474272 EML3Q32P44 896 aa8.22□□□□□ -1.09
TMEM50B-208ENST00000474272 NBPF1Q3BBV0 1214 aa8.22□□□□□ -1.09
TMEM50B-208ENST00000474272 C1orf216Q8TAB5 229 aa8.22□□□□□ -1.09
TMEM50B-208ENST00000474272 ALG2Q9H553 416 aa8.22□□□□□ -1.09
TMEM50B-208ENST00000474272 STRN4Q9NRL3 753 aa8.22□□□□□ -1.09
TMEM50B-208ENST00000474272 TATP17735 454 aaPredicted RBP8.21□□□□□ -1.1
TMEM50B-208ENST00000474272 NCOA4Q13772 614 aa8.21□□□□□ -1.1
TMEM50B-208ENST00000474272 ZDHHC1Q8WTX9 485 aa8.21□□□□□ -1.1
TMEM50B-208ENST00000474272 NOD1Q9Y239 953 aa8.21□□□□□ -1.1
TMEM50B-208ENST00000474272 GJA3Q9Y6H8 435 aa8.21□□□□□ -1.1
TMEM50B-208ENST00000474272 BICDL1Q6ZP65 573 aa8.2□□□□□ -1.1
TMEM50B-208ENST00000474272 FCHSD1Q86WN1 690 aa8.2□□□□□ -1.1
TMEM50B-208ENST00000474272 ZNF358Q9NW07 568 aa8.2□□□□□ -1.1
TMEM50B-208ENST00000474272 FURINP09958 794 aa8.19□□□□□ -1.1
TMEM50B-208ENST00000474272 BAG6P46379 1132 aa8.19□□□□□ -1.1
TMEM50B-208ENST00000474272 TNS4Q8IZW8 715 aa8.19□□□□□ -1.1
TMEM50B-208ENST00000474272 POM121CA8CG34 1229 aa8.18□□□□□ -1.1
TMEM50B-208ENST00000474272 DGKGP49619 791 aa8.18□□□□□ -1.1
TMEM50B-208ENST00000474272 SH3PXD2AQ5TCZ1 1133 aa8.18□□□□□ -1.1
TMEM50B-208ENST00000474272 CHSY3Q70JA7 882 aa8.18□□□□□ -1.1
TMEM50B-208ENST00000474272 L3MBTL2Q969R5 705 aa8.18□□□□□ -1.1
TMEM50B-208ENST00000474272 ZDHHC3Q9NYG2 299 aa8.18□□□□□ -1.1
TMEM50B-208ENST00000474272 SCHIP1Q9P0W5 487 aaPredicted RBP8.18□□□□□ -1.1
TMEM50B-208ENST00000474272 PRR12Q9ULL5 1215 aa8.18□□□□□ -1.1
TMEM50B-208ENST00000474272 GNB5O14775 395 aa8.17□□□□□ -1.1
TMEM50B-208ENST00000474272 BACH1O14867 736 aa8.17□□□□□ -1.1
TMEM50B-208ENST00000474272 ADH6P28332 368 aa8.17□□□□□ -1.1
TMEM50B-208ENST00000474272 LRRC69Q6ZNQ3 347 aa8.17□□□□□ -1.1
TMEM50B-208ENST00000474272 USP17L5A8MUK1 530 aa8.16□□□□□ -1.1
TMEM50B-208ENST00000474272 C1QTNF9BB2RNN3 333 aa8.16□□□□□ -1.1
TMEM50B-208ENST00000474272 NOS2P35228 1153 aa8.16□□□□□ -1.1
TMEM50B-208ENST00000474272 FAM182BQ5T319 152 aa8.16□□□□□ -1.1
TMEM50B-208ENST00000474272 SLC9A9Q8IVB4 645 aa8.16□□□□□ -1.1
TMEM50B-208ENST00000474272 ADAMTS19Q8TE59 1207 aa8.16□□□□□ -1.1
TMEM50B-208ENST00000474272 ZNF232Q9UNY5 417 aa8.16□□□□□ -1.1
TMEM50B-208ENST00000474272 K7ELQ4 463 aaPredicted RBP8.15□□□□□ -1.1
TMEM50B-208ENST00000474272 FAM157BP0CG42 384 aa8.15□□□□□ -1.1
TMEM50B-208ENST00000474272 EPHA4P54764 986 aa8.15□□□□□ -1.1
TMEM50B-208ENST00000474272 CD163Q86VB7 1156 aa8.15□□□□□ -1.1
TMEM50B-208ENST00000474272 MARK1Q9P0L2 795 aa8.15□□□□□ -1.1
TMEM50B-208ENST00000474272 KIAA1024Q9UPX6 916 aa8.15□□□□□ -1.1
TMEM50B-208ENST00000474272 CHRNA4P43681 627 aa8.14□□□□□ -1.11
TMEM50B-208ENST00000474272 ZNF468Q5VIY5 522 aaPredicted RBP8.14□□□□□ -1.11
TMEM50B-208ENST00000474272 TPCN2Q8NHX9 752 aa8.14□□□□□ -1.11
TMEM50B-208ENST00000474272 ZBTB7BO15156 539 aaPredicted RBP8.13□□□□□ -1.11
TMEM50B-208ENST00000474272 EFSO43281 561 aa8.13□□□□□ -1.11
TMEM50B-208ENST00000474272 SFSWAPQ12872 951 aaKnown RBP8.13□□□□□ -1.11
TMEM50B-208ENST00000474272 TEAD4Q15561 434 aa8.13□□□□□ -1.11
TMEM50B-208ENST00000474272 SYT9Q86SS6 491 aa8.13□□□□□ -1.11
TMEM50B-208ENST00000474272 NFATC2IPQ8NCF5 419 aa8.13□□□□□ -1.11
TMEM50B-208ENST00000474272 C7orf43Q8WVR3 580 aa8.13□□□□□ -1.11
TMEM50B-208ENST00000474272 TRIM11Q96F44 468 aa8.13□□□□□ -1.11
TMEM50B-208ENST00000474272 EML1O00423 815 aa8.12□□□□□ -1.11
TMEM50B-208ENST00000474272 LZTS3O60299 673 aaPredicted RBP8.12□□□□□ -1.11
TMEM50B-208ENST00000474272 CLDN10P78369 228 aa8.12□□□□□ -1.11
TMEM50B-208ENST00000474272 SAMD5Q5TGI4 173 aa8.12□□□□□ -1.11
TMEM50B-208ENST00000474272 HDGFL1Q5TGJ6 251 aa8.12□□□□□ -1.11
TMEM50B-208ENST00000474272 CCDC102BQ68D86 513 aa8.12□□□□□ -1.11
TMEM50B-208ENST00000474272 ALYREFQ86V81 257 aaKnown RBP8.12□□□□□ -1.11
TMEM50B-208ENST00000474272 PLVAPQ9BX97 442 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms