RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 IL17REQ8NFR9 667 aa14.84□□□□□ -0.03
SEMA4D-216ENST00000474258 NUDCQ9Y266 331 aa14.84□□□□□ -0.03
SEMA4D-216ENST00000474258 POLRMTO00411 1230 aaKnown RBP14.83□□□□□ -0.04
SEMA4D-216ENST00000474258 FCHSD2O94868 740 aa14.83□□□□□ -0.04
SEMA4D-216ENST00000474258 DDR1Q08345 913 aa14.83□□□□□ -0.04
SEMA4D-216ENST00000474258 NARFQ9UHQ1 456 aa14.83□□□□□ -0.04
SEMA4D-216ENST00000474258 ZBTB1Q9Y2K1 713 aa14.83□□□□□ -0.04
SEMA4D-216ENST00000474258 COL15A1P39059 1388 aa14.83□□□□□ -0.04
SEMA4D-216ENST00000474258 STARD3NLO95772 234 aa14.82□□□□□ -0.04
SEMA4D-216ENST00000474258 KCNA3P22001 575 aa14.82□□□□□ -0.04
SEMA4D-216ENST00000474258 ARHGAP27Q6ZUM4 889 aa14.82□□□□□ -0.04
SEMA4D-216ENST00000474258 ZNF526Q8TF50 670 aaPredicted RBP14.82□□□□□ -0.04
SEMA4D-216ENST00000474258 PIM2Q9P1W9 311 aa14.82□□□□□ -0.04
SEMA4D-216ENST00000474258 SBF1O95248 1867 aa14.81□□□□□ -0.04
SEMA4D-216ENST00000474258 CANXP27824 592 aaKnown RBP14.81□□□□□ -0.04
SEMA4D-216ENST00000474258 PPP2R1AP30153 589 aa14.81□□□□□ -0.04
SEMA4D-216ENST00000474258 PRKAR2BP31323 418 aa14.81□□□□□ -0.04
SEMA4D-216ENST00000474258 ZNF790Q6PG37 636 aa14.81□□□□□ -0.04
SEMA4D-216ENST00000474258 TEX13AQ9BXU3 409 aaPredicted RBP14.81□□□□□ -0.04
SEMA4D-216ENST00000474258 RSPH6AQ9H0K4 717 aa14.81□□□□□ -0.04
SEMA4D-216ENST00000474258 NRXN2Q9P2S2 1712 aa14.8□□□□□ -0.04
SEMA4D-216ENST00000474258 ZNF496Q96IT1 587 aaPredicted RBP14.8□□□□□ -0.04
SEMA4D-216ENST00000474258 PHACTR3Q96KR7 559 aa14.8□□□□□ -0.04
SEMA4D-216ENST00000474258 HEG1Q9ULI3 1381 aa14.8□□□□□ -0.04
SEMA4D-216ENST00000474258 A0A087WZG4 1122 aa14.79□□□□□ -0.04
SEMA4D-216ENST00000474258 U2AF1L5P0DN76 240 aaPredicted RBP14.79□□□□□ -0.04
SEMA4D-216ENST00000474258 EIF5P55010 431 aaKnown RBP14.79□□□□□ -0.04
SEMA4D-216ENST00000474258 U2AF1Q01081 240 aaKnown RBP eCLIP14.79□□□□□ -0.04
SEMA4D-216ENST00000474258 NFIXQ14938 502 aa14.79□□□□□ -0.04
SEMA4D-216ENST00000474258 DALRD3Q5D0E6 543 aaKnown RBP14.79□□□□□ -0.04
SEMA4D-216ENST00000474258 CEMIPQ8WUJ3 1361 aa14.79□□□□□ -0.04
SEMA4D-216ENST00000474258 FMNL2Q96PY5 1086 aa14.79□□□□□ -0.04
SEMA4D-216ENST00000474258 CCDC88AQ3V6T2 1871 aa14.78□□□□□ -0.04
SEMA4D-216ENST00000474258 BTBD11A6QL63 1104 aa14.78□□□□□ -0.04
SEMA4D-216ENST00000474258 BCL2L12Q9HB09 334 aa14.78□□□□□ -0.04
SEMA4D-216ENST00000474258 DLG5Q8TDM6 1919 aa14.77□□□□□ -0.04
SEMA4D-216ENST00000474258 ZNF316A6NFI3 1004 aaPredicted RBP14.77□□□□□ -0.05
SEMA4D-216ENST00000474258 SERPINB2P05120 415 aa14.77□□□□□ -0.05
SEMA4D-216ENST00000474258 CHRNA5P30532 468 aa14.77□□□□□ -0.05
SEMA4D-216ENST00000474258 RTF1Q92541 710 aaKnown RBP14.77□□□□□ -0.05
SEMA4D-216ENST00000474258 DLEC1Q9Y238 1755 aa14.77□□□□□ -0.05
SEMA4D-216ENST00000474258 IL6STP40189 918 aaPredicted RBP14.75□□□□□ -0.05
SEMA4D-216ENST00000474258 NPM2Q86SE8 214 aaKnown RBP14.75□□□□□ -0.05
SEMA4D-216ENST00000474258 ZNF330Q9Y3S2 320 aaPredicted RBP14.75□□□□□ -0.05
SEMA4D-216ENST00000474258 SCN7AQ01118 1682 aa14.74□□□□□ -0.05
SEMA4D-216ENST00000474258 KIF3CO14782 793 aa14.74□□□□□ -0.05
SEMA4D-216ENST00000474258 KCNQ3O43525 872 aa14.74□□□□□ -0.05
SEMA4D-216ENST00000474258 HTATSF1O43719 755 aaKnown RBP14.74□□□□□ -0.05
SEMA4D-216ENST00000474258 A1BGP04217 495 aa14.74□□□□□ -0.05
SEMA4D-216ENST00000474258 BICDL1Q6ZP65 573 aa14.74□□□□□ -0.05
SEMA4D-216ENST00000474258 ANKRD31Q8N7Z5 1873 aa14.74□□□□□ -0.05
SEMA4D-216ENST00000474258 C9orf131Q5VYM1 1079 aa14.73□□□□□ -0.05
SEMA4D-216ENST00000474258 MCM10Q7L590 875 aa14.73□□□□□ -0.05
SEMA4D-216ENST00000474258 TBC1D2BQ9UPU7 963 aa14.73□□□□□ -0.05
SEMA4D-216ENST00000474258 NEFMP07197 916 aa14.72□□□□□ -0.05
SEMA4D-216ENST00000474258 TBC1D9BQ66K14 1250 aa14.72□□□□□ -0.05
SEMA4D-216ENST00000474258 USP16Q9Y5T5 823 aa14.72□□□□□ -0.05
SEMA4D-216ENST00000474258 BCORQ6W2J9 1755 aa14.72□□□□□ -0.05
SEMA4D-216ENST00000474258 H0YIN7 160 aa14.71□□□□□ -0.05
SEMA4D-216ENST00000474258 SNRPA1P09661 255 aaKnown RBP14.71□□□□□ -0.05
SEMA4D-216ENST00000474258 HSPA6P17066 643 aa14.71□□□□□ -0.05
SEMA4D-216ENST00000474258 C2CD5Q86YS7 1000 aa14.71□□□□□ -0.05
SEMA4D-216ENST00000474258 TTLL6Q8N841 843 aa14.71□□□□□ -0.05
SEMA4D-216ENST00000474258 CACNA1SQ13698 1873 aa14.7□□□□□ -0.06
SEMA4D-216ENST00000474258 DCTN1Q14203 1278 aa14.7□□□□□ -0.06
SEMA4D-216ENST00000474258 SETDB2Q96T68 719 aa14.7□□□□□ -0.06
SEMA4D-216ENST00000474258 RNF181Q9P0P0 153 aa14.7□□□□□ -0.06
SEMA4D-216ENST00000474258 PDZRN3Q9UPQ7 1066 aa14.7□□□□□ -0.06
SEMA4D-216ENST00000474258 TOMM70O94826 608 aa14.69□□□□□ -0.06
SEMA4D-216ENST00000474258 CAMTA2O94983 1202 aa14.69□□□□□ -0.06
SEMA4D-216ENST00000474258 PDE6BP35913 854 aa14.69□□□□□ -0.06
SEMA4D-216ENST00000474258 TAF7Q15545 349 aaPredicted RBP14.69□□□□□ -0.06
SEMA4D-216ENST00000474258 DZIP3Q86Y13 1208 aaKnown RBP14.69□□□□□ -0.06
SEMA4D-216ENST00000474258 CARMIL3Q8ND23 1372 aa14.69□□□□□ -0.06
SEMA4D-216ENST00000474258 DICER1Q9UPY3 1922 aaKnown RBP14.68□□□□□ -0.06
SEMA4D-216ENST00000474258 PRAMEF22A3QJZ6 481 aa14.68□□□□□ -0.06
SEMA4D-216ENST00000474258 BRIP1Q9BX63 1249 aa14.68□□□□□ -0.06
SEMA4D-216ENST00000474258 PNNQ9H307 717 aaKnown RBP14.68□□□□□ -0.06
SEMA4D-216ENST00000474258 NMRK2Q9NPI5 230 aa14.68□□□□□ -0.06
SEMA4D-216ENST00000474258 KDM2BQ8NHM5 1336 aa14.67□□□□□ -0.06
SEMA4D-216ENST00000474258 NPHP1O15259 732 aa14.67□□□□□ -0.06
SEMA4D-216ENST00000474258 PRR5LQ6MZQ0 368 aa14.67□□□□□ -0.06
SEMA4D-216ENST00000474258 CLEC4GQ6UXB4 293 aa14.67□□□□□ -0.06
SEMA4D-216ENST00000474258 TNRC6CQ9HCJ0 1690 aaKnown RBP14.67□□□□□ -0.06
SEMA4D-216ENST00000474258 LAMB4A4D0S4 1761 aa14.67□□□□□ -0.06
SEMA4D-216ENST00000474258 FER1L6Q2WGJ9 1857 aa14.67□□□□□ -0.06
SEMA4D-216ENST00000474258 COL11A2P13942 1736 aaPredicted RBP14.66□□□□□ -0.06
SEMA4D-216ENST00000474258 KDM3BQ7LBC6 1761 aa14.66□□□□□ -0.06
SEMA4D-216ENST00000474258 PIP4K2AP48426 406 aaPredicted RBP14.66□□□□□ -0.06
SEMA4D-216ENST00000474258 RASSF7Q02833 373 aa14.66□□□□□ -0.06
SEMA4D-216ENST00000474258 PNISRQ8TF01 805 aaKnown RBP14.66□□□□□ -0.06
SEMA4D-216ENST00000474258 ZNF622Q969S3 477 aaKnown RBP eCLIP14.66□□□□□ -0.06
SEMA4D-216ENST00000474258 PLEKHF1Q96S99 279 aa14.66□□□□□ -0.06
SEMA4D-216ENST00000474258 ZNF652Q9Y2D9 606 aa14.66□□□□□ -0.06
SEMA4D-216ENST00000474258 SLX4Q8IY92 1834 aa14.66□□□□□ -0.06
SEMA4D-216ENST00000474258 ZC3H4Q9UPT8 1303 aaKnown RBP14.66□□□□□ -0.06
SEMA4D-216ENST00000474258 ARFGEF2Q9Y6D5 1785 aa14.65□□□□□ -0.06
SEMA4D-216ENST00000474258 NUP98P52948 1817 aa14.65□□□□□ -0.06
SEMA4D-216ENST00000474258 LMNB1P20700 586 aa14.65□□□□□ -0.06
SEMA4D-216ENST00000474258 ST5P78524 1137 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms