RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 KIF3CO14782 793 aa21.76■■□□□ 1.07
CPA4-205ENST00000474254 GNAT3A8MTJ3 354 aa21.75■■□□□ 1.07
CPA4-205ENST00000474254 U2AF1L5P0DN76 240 aaPredicted RBP21.75■■□□□ 1.07
CPA4-205ENST00000474254 U2AF1Q01081 240 aaKnown RBP eCLIP21.75■■□□□ 1.07
CPA4-205ENST00000474254 DDR1Q08345 913 aa21.75■■□□□ 1.07
CPA4-205ENST00000474254 DALRD3Q5D0E6 543 aaKnown RBP21.75■■□□□ 1.07
CPA4-205ENST00000474254 PHACTR3Q96KR7 559 aa21.75■■□□□ 1.07
CPA4-205ENST00000474254 SLC39A6Q13433 755 aa21.74■■□□□ 1.07
CPA4-205ENST00000474254 USPL1Q5W0Q7 1092 aa21.74■■□□□ 1.07
CPA4-205ENST00000474254 SOS1Q07889 1333 aaPredicted RBP21.74■■□□□ 1.07
CPA4-205ENST00000474254 CEMIPQ8WUJ3 1361 aa21.74■■□□□ 1.07
CPA4-205ENST00000474254 COL15A1P39059 1388 aa21.73■■□□□ 1.07
CPA4-205ENST00000474254 POLRMTO00411 1230 aaKnown RBP21.72■■□□□ 1.07
CPA4-205ENST00000474254 CYP19A1P11511 503 aaPredicted RBP21.72■■□□□ 1.07
CPA4-205ENST00000474254 KCNA3P22001 575 aa21.72■■□□□ 1.07
CPA4-205ENST00000474254 IL17REQ8NFR9 667 aa21.72■■□□□ 1.07
CPA4-205ENST00000474254 C9orf131Q5VYM1 1079 aa21.71■■□□□ 1.07
CPA4-205ENST00000474254 AFDNP55196 1824 aaKnown RBP21.71■■□□□ 1.07
CPA4-205ENST00000474254 TM4SF1P30408 202 aa21.7■■□□□ 1.06
CPA4-205ENST00000474254 CHRNA5P30532 468 aa21.7■■□□□ 1.06
CPA4-205ENST00000474254 TEFQ10587 303 aa21.7■■□□□ 1.06
CPA4-205ENST00000474254 DDX10Q13206 875 aaKnown RBP21.7■■□□□ 1.06
CPA4-205ENST00000474254 TTC5Q8N0Z6 440 aa21.7■■□□□ 1.06
CPA4-205ENST00000474254 NARFQ9UHQ1 456 aa21.7■■□□□ 1.06
CPA4-205ENST00000474254 TOMM70O94826 608 aa21.69■■□□□ 1.06
CPA4-205ENST00000474254 VSIG10Q8N0Z9 540 aa21.69■■□□□ 1.06
CPA4-205ENST00000474254 ZBTB1Q9Y2K1 713 aa21.69■■□□□ 1.06
CPA4-205ENST00000474254 RALBP1Q15311 655 aa21.68■■□□□ 1.06
CPA4-205ENST00000474254 C16orf71Q8IYS4 520 aaPredicted RBP21.67■■□□□ 1.06
CPA4-205ENST00000474254 NMRK2Q9NPI5 230 aa21.67■■□□□ 1.06
CPA4-205ENST00000474254 RNF181Q9P0P0 153 aa21.67■■□□□ 1.06
CPA4-205ENST00000474254 NRXN2Q9P2S2 1712 aa21.66■■□□□ 1.06
CPA4-205ENST00000474254 CANXP27824 592 aaKnown RBP21.66■■□□□ 1.06
CPA4-205ENST00000474254 APLP1P51693 650 aa21.66■■□□□ 1.06
CPA4-205ENST00000474254 NFIXQ14938 502 aa21.66■■□□□ 1.06
CPA4-205ENST00000474254 DLEC1Q9Y238 1755 aa21.66■■□□□ 1.06
CPA4-205ENST00000474254 SBF1O95248 1867 aa21.65■■□□□ 1.06
CPA4-205ENST00000474254 KDM2BQ8NHM5 1336 aa21.65■■□□□ 1.06
CPA4-205ENST00000474254 STARD3NLO95772 234 aa21.65■■□□□ 1.06
CPA4-205ENST00000474254 ZNF790Q6PG37 636 aa21.65■■□□□ 1.06
CPA4-205ENST00000474254 KDM3BQ7LBC6 1761 aa21.64■■□□□ 1.06
CPA4-205ENST00000474254 HEG1Q9ULI3 1381 aa21.63■■□□□ 1.05
CPA4-205ENST00000474254 SCN7AQ01118 1682 aa21.63■■□□□ 1.05
CPA4-205ENST00000474254 TNRC6CQ9HCJ0 1690 aaKnown RBP21.63■■□□□ 1.05
CPA4-205ENST00000474254 A0A087WZG4 1122 aa21.63■■□□□ 1.05
CPA4-205ENST00000474254 SERPINB2P05120 415 aa21.63■■□□□ 1.05
CPA4-205ENST00000474254 ZNF496Q96IT1 587 aaPredicted RBP21.63■■□□□ 1.05
CPA4-205ENST00000474254 LAMB4A4D0S4 1761 aa21.62■■□□□ 1.05
CPA4-205ENST00000474254 IFFO2Q5TF58 517 aa21.62■■□□□ 1.05
CPA4-205ENST00000474254 RTF1Q92541 710 aaKnown RBP21.62■■□□□ 1.05
CPA4-205ENST00000474254 MYBBP1AQ9BQG0 1328 aaKnown RBP21.61■■□□□ 1.05
CPA4-205ENST00000474254 HTATSF1O43719 755 aaKnown RBP21.61■■□□□ 1.05
CPA4-205ENST00000474254 MCM10Q7L590 875 aa21.61■■□□□ 1.05
CPA4-205ENST00000474254 RBM46Q8TBY0 533 aaKnown RBP21.61■■□□□ 1.05
CPA4-205ENST00000474254 PLEKHF1Q96S99 279 aa21.61■■□□□ 1.05
CPA4-205ENST00000474254 BCL2L12Q9HB09 334 aa21.61■■□□□ 1.05
CPA4-205ENST00000474254 BICDL1Q6ZP65 573 aa21.6■■□□□ 1.05
CPA4-205ENST00000474254 TEX13AQ9BXU3 409 aaPredicted RBP21.6■■□□□ 1.05
CPA4-205ENST00000474254 ZNF330Q9Y3S2 320 aaPredicted RBP21.6■■□□□ 1.05
CPA4-205ENST00000474254 WDR90Q96KV7 1748 aa21.6■■□□□ 1.05
CPA4-205ENST00000474254 BCORQ6W2J9 1755 aa21.59■■□□□ 1.05
CPA4-205ENST00000474254 BTBD11A6QL63 1104 aa21.59■■□□□ 1.05
CPA4-205ENST00000474254 NEFMP07197 916 aa21.59■■□□□ 1.05
CPA4-205ENST00000474254 ZEB1P37275 1124 aaPredicted RBP21.59■■□□□ 1.05
CPA4-205ENST00000474254 NPM2Q86SE8 214 aaKnown RBP21.59■■□□□ 1.05
CPA4-205ENST00000474254 C2CD5Q86YS7 1000 aa21.59■■□□□ 1.05
CPA4-205ENST00000474254 FMNL2Q96PY5 1086 aa21.59■■□□□ 1.05
CPA4-205ENST00000474254 H0YIN7 160 aa21.58■■□□□ 1.05
CPA4-205ENST00000474254 EIF5P55010 431 aaKnown RBP21.58■■□□□ 1.05
CPA4-205ENST00000474254 RASSF7Q02833 373 aa21.58■■□□□ 1.05
CPA4-205ENST00000474254 TTLL6Q8N841 843 aa21.58■■□□□ 1.05
CPA4-205ENST00000474254 DCTN1Q14203 1278 aa21.57■■□□□ 1.04
CPA4-205ENST00000474254 ZC3H4Q9UPT8 1303 aaKnown RBP21.56■■□□□ 1.04
CPA4-205ENST00000474254 TIAM2Q8IVF5 1701 aa21.56■■□□□ 1.04
CPA4-205ENST00000474254 KCNQ3O43525 872 aa21.56■■□□□ 1.04
CPA4-205ENST00000474254 PNNQ9H307 717 aaKnown RBP21.56■■□□□ 1.04
CPA4-205ENST00000474254 RRAGCQ9HB90 399 aa21.56■■□□□ 1.04
CPA4-205ENST00000474254 CARMIL3Q8ND23 1372 aa21.56■■□□□ 1.04
CPA4-205ENST00000474254 CCDC88AQ3V6T2 1871 aa21.56■■□□□ 1.04
CPA4-205ENST00000474254 MAPK8IP3Q9UPT6 1336 aa21.55■■□□□ 1.04
CPA4-205ENST00000474254 LMNB1P20700 586 aa21.55■■□□□ 1.04
CPA4-205ENST00000474254 FSTL1Q12841 308 aa21.55■■□□□ 1.04
CPA4-205ENST00000474254 NFE2L2Q16236 605 aa21.55■■□□□ 1.04
CPA4-205ENST00000474254 ANKRD31Q8N7Z5 1873 aa21.54■■□□□ 1.04
CPA4-205ENST00000474254 IL6STP40189 918 aaPredicted RBP21.54■■□□□ 1.04
CPA4-205ENST00000474254 NPHP1O15259 732 aa21.53■■□□□ 1.04
CPA4-205ENST00000474254 TBC1D9BQ66K14 1250 aa21.53■■□□□ 1.04
CPA4-205ENST00000474254 PDZRN3Q9UPQ7 1066 aa21.53■■□□□ 1.04
CPA4-205ENST00000474254 TBC1D2BQ9UPU7 963 aa21.53■■□□□ 1.04
CPA4-205ENST00000474254 PDE6BP35913 854 aa21.52■■□□□ 1.04
CPA4-205ENST00000474254 ZNF622Q969S3 477 aaKnown RBP eCLIP21.52■■□□□ 1.04
CPA4-205ENST00000474254 PRKRIP1Q9H875 184 aaPredicted RBP21.51■■□□□ 1.03
CPA4-205ENST00000474254 COL11A2P13942 1736 aaPredicted RBP21.51■■□□□ 1.03
CPA4-205ENST00000474254 TAF7Q15545 349 aaPredicted RBP21.5■■□□□ 1.03
CPA4-205ENST00000474254 SMC1BQ8NDV3 1235 aa21.5■■□□□ 1.03
CPA4-205ENST00000474254 BRIP1Q9BX63 1249 aa21.5■■□□□ 1.03
CPA4-205ENST00000474254 CACNA1SQ13698 1873 aa21.49■■□□□ 1.03
CPA4-205ENST00000474254 A1BGP04217 495 aa21.49■■□□□ 1.03
CPA4-205ENST00000474254 PRR5LQ6MZQ0 368 aa21.49■■□□□ 1.03
CPA4-205ENST00000474254 DNAJC5GQ8N7S2 189 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms