RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 ESF1Q9H501 851 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-213ENST00000474240 UBTFP17480 764 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-213ENST00000474240 FCHSD1Q86WN1 690 aa6.78□□□□□ -1.32
ECHDC1-213ENST00000474240 MTMR14Q8NCE2 650 aa6.78□□□□□ -1.32
ECHDC1-213ENST00000474240 GNRH1P01148 92 aa6.77□□□□□ -1.33
ECHDC1-213ENST00000474240 GTF2E1P29083 439 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-213ENST00000474240 FHDC1Q9C0D6 1143 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-213ENST00000474240 ADH6P28332 368 aa6.76□□□□□ -1.33
ECHDC1-213ENST00000474240 PRSS36Q5K4E3 855 aa6.76□□□□□ -1.33
ECHDC1-213ENST00000474240 CRISPLD1Q9H336 500 aa6.76□□□□□ -1.33
ECHDC1-213ENST00000474240 DNAAF2Q9NVR5 837 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-213ENST00000474240 KLF15Q9UIH9 416 aa6.76□□□□□ -1.33
ECHDC1-213ENST00000474240 DCDC2BA2VCK2 349 aa6.75□□□□□ -1.33
ECHDC1-213ENST00000474240 CD33P20138 364 aa6.75□□□□□ -1.33
ECHDC1-213ENST00000474240 SNRKQ9NRH2 765 aa6.75□□□□□ -1.33
ECHDC1-213ENST00000474240 ZNF330Q9Y3S2 320 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-213ENST00000474240 HRH3Q9Y5N1 445 aa6.75□□□□□ -1.33
ECHDC1-213ENST00000474240 PLA2G4AP47712 749 aa6.74□□□□□ -1.33
ECHDC1-213ENST00000474240 FIGNL1Q6PIW4 674 aa6.74□□□□□ -1.33
ECHDC1-213ENST00000474240 GJD4Q96KN9 370 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-213ENST00000474240 ZCCHC2Q9C0B9 1178 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-213ENST00000474240 HCN2Q9UL51 889 aa6.74□□□□□ -1.33
ECHDC1-213ENST00000474240 PCDHGC4Q9Y5F7 938 aa6.74□□□□□ -1.33
ECHDC1-213ENST00000474240 A6NJR5 290 aa6.73□□□□□ -1.33
ECHDC1-213ENST00000474240 APBA3O96018 575 aa6.73□□□□□ -1.33
ECHDC1-213ENST00000474240 WASHC4Q2M389 1173 aa6.73□□□□□ -1.33
ECHDC1-213ENST00000474240 RHBDD1Q8TEB9 315 aa6.73□□□□□ -1.33
ECHDC1-213ENST00000474240 GOLGA2P5Q9HBQ8 144 aa6.73□□□□□ -1.33
ECHDC1-213ENST00000474240 FAM229AH3BQW9 127 aa6.72□□□□□ -1.33
ECHDC1-213ENST00000474240 ATXN7O15265 892 aaPredicted RBP6.72□□□□□ -1.33
ECHDC1-213ENST00000474240 STAU1O95793 577 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-213ENST00000474240 ATP4AP20648 1035 aa6.72□□□□□ -1.33
ECHDC1-213ENST00000474240 PCBP4P57723 403 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-213ENST00000474240 PRRT3Q5FWE3 981 aa6.72□□□□□ -1.33
ECHDC1-213ENST00000474240 TBC1D9Q6ZT07 1266 aa6.72□□□□□ -1.33
ECHDC1-213ENST00000474240 XAGE2Q96GT9 111 aa6.72□□□□□ -1.33
ECHDC1-213ENST00000474240 MCCD1P59942 119 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-213ENST00000474240 LRP8Q14114 963 aa6.71□□□□□ -1.34
ECHDC1-213ENST00000474240 C14orf37Q86TY3 774 aa6.71□□□□□ -1.34
ECHDC1-213ENST00000474240 CDCA7Q9BWT1 371 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-213ENST00000474240 COG6Q9Y2V7 657 aa6.71□□□□□ -1.34
ECHDC1-213ENST00000474240 KHNYNO15037 678 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-213ENST00000474240 MYCP01106 439 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-213ENST00000474240 MAPTP10636 758 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-213ENST00000474240 SOX11P35716 441 aa6.7□□□□□ -1.34
ECHDC1-213ENST00000474240 TLR1Q15399 786 aa6.7□□□□□ -1.34
ECHDC1-213ENST00000474240 AVENQ9NQS1 362 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-213ENST00000474240 SPDYE3A6NKU9 549 aa6.69□□□□□ -1.34
ECHDC1-213ENST00000474240 NR1H3Q13133 447 aa6.69□□□□□ -1.34
ECHDC1-213ENST00000474240 ESCO1Q5FWF5 840 aa6.69□□□□□ -1.34
ECHDC1-213ENST00000474240 FAM182BQ5T319 152 aa6.69□□□□□ -1.34
ECHDC1-213ENST00000474240 TBC1D2BQ9UPU7 963 aa6.69□□□□□ -1.34
ECHDC1-213ENST00000474240 ABL2P42684 1182 aa6.68□□□□□ -1.34
ECHDC1-213ENST00000474240 TNP2Q05952 138 aa6.68□□□□□ -1.34
ECHDC1-213ENST00000474240 ZNF468Q5VIY5 522 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-213ENST00000474240 NLRP8Q86W28 1048 aa6.68□□□□□ -1.34
ECHDC1-213ENST00000474240 PROSER2Q86WR7 435 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-213ENST00000474240 PPARGC1BQ86YN6 1023 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-213ENST00000474240 CCDC85AQ96PX6 553 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-213ENST00000474240 ETNK1Q9HBU6 452 aa6.68□□□□□ -1.34
ECHDC1-213ENST00000474240 GDPD2Q9HCC8 539 aa6.68□□□□□ -1.34
ECHDC1-213ENST00000474240 HYAL3O43820 417 aaPredicted RBP6.67□□□□□ -1.34
ECHDC1-213ENST00000474240 EIF4G2P78344 907 aaKnown RBP eCLIP6.67□□□□□ -1.34
ECHDC1-213ENST00000474240 ZMYND15Q9H091 742 aa6.67□□□□□ -1.34
ECHDC1-213ENST00000474240 PRR12Q9ULL5 1215 aa6.67□□□□□ -1.34
ECHDC1-213ENST00000474240 ELOA3CA0A087WX78 387 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-213ENST00000474240 ELOA3DA6NLF2 546 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-213ENST00000474240 ELOA3BQ3SY89 546 aa6.66□□□□□ -1.34
ECHDC1-213ENST00000474240 ELOA3Q8NG57 546 aa6.66□□□□□ -1.34
ECHDC1-213ENST00000474240 AIDAQ96BJ3 306 aa6.66□□□□□ -1.34
ECHDC1-213ENST00000474240 A0A1W2PNR3 127 aa6.65□□□□□ -1.34
ECHDC1-213ENST00000474240 GRIK4Q16099 956 aa6.65□□□□□ -1.34
ECHDC1-213ENST00000474240 ARSJQ5FYB0 599 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-213ENST00000474240 NACC1Q96RE7 527 aa6.65□□□□□ -1.34
ECHDC1-213ENST00000474240 M0R082 166 aa6.64□□□□□ -1.35
ECHDC1-213ENST00000474240 GPR37L1O60883 481 aa6.64□□□□□ -1.35
ECHDC1-213ENST00000474240 C1orf216Q8TAB5 229 aa6.64□□□□□ -1.35
ECHDC1-213ENST00000474240 ZNF417Q8TAU3 575 aa6.64□□□□□ -1.35
ECHDC1-213ENST00000474240 ZNF587Q96SQ5 575 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-213ENST00000474240 STRN4Q9NRL3 753 aa6.64□□□□□ -1.35
ECHDC1-213ENST00000474240 FAM157BP0CG42 384 aa6.63□□□□□ -1.35
ECHDC1-213ENST00000474240 IRF5Q13568 498 aa6.63□□□□□ -1.35
ECHDC1-213ENST00000474240 CLUAP1Q96AJ1 413 aa6.63□□□□□ -1.35
ECHDC1-213ENST00000474240 POM121Q96HA1 1249 aa6.63□□□□□ -1.35
ECHDC1-213ENST00000474240 ALAS2P22557 587 aa6.62□□□□□ -1.35
ECHDC1-213ENST00000474240 TRIM28Q13263 835 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-213ENST00000474240 COL9A3Q14050 684 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-213ENST00000474240 MCTP1Q6DN14 999 aa6.62□□□□□ -1.35
ECHDC1-213ENST00000474240 C8orf86Q6ZUL3 223 aa6.62□□□□□ -1.35
ECHDC1-213ENST00000474240 FNBP4Q8N3X1 1017 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-213ENST00000474240 ALBP02768 609 aa6.61□□□□□ -1.35
ECHDC1-213ENST00000474240 H2AFB1P0C5Y9 115 aa6.61□□□□□ -1.35
ECHDC1-213ENST00000474240 H2AFB2P0C5Z0 115 aa6.61□□□□□ -1.35
ECHDC1-213ENST00000474240 SYT9Q86SS6 491 aa6.61□□□□□ -1.35
ECHDC1-213ENST00000474240 MDFIQ99750 246 aa6.61□□□□□ -1.35
ECHDC1-213ENST00000474240 NIFKQ9BYG3 293 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-213ENST00000474240 MARK1Q9P0L2 795 aa6.61□□□□□ -1.35
ECHDC1-213ENST00000474240 GJA3Q9Y6H8 435 aa6.61□□□□□ -1.35
ECHDC1-213ENST00000474240 SEMA3FQ13275 785 aa6.6□□□□□ -1.35
ECHDC1-213ENST00000474240 MBTPS1Q14703 1052 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms