RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 RASSF7Q02833 373 aa23.82■■□□□ 1.4
CUL4A-208ENST00000474116 MORC1Q86VD1 984 aa23.82■■□□□ 1.4
CUL4A-208ENST00000474116 NRXN2Q9P2S2 1712 aa23.81■■□□□ 1.4
CUL4A-208ENST00000474116 NFIXQ14938 502 aa23.81■■□□□ 1.4
CUL4A-208ENST00000474116 AKAP4Q5JQC9 854 aa23.81■■□□□ 1.4
CUL4A-208ENST00000474116 SLC52A2Q9HAB3 445 aa23.81■■□□□ 1.4
CUL4A-208ENST00000474116 LGR6Q9HBX8 967 aa23.81■■□□□ 1.4
CUL4A-208ENST00000474116 NARFQ9UHQ1 456 aa23.81■■□□□ 1.4
CUL4A-208ENST00000474116 LMNB1P20700 586 aa23.79■■□□□ 1.4
CUL4A-208ENST00000474116 BCL2L12Q9HB09 334 aa23.79■■□□□ 1.4
CUL4A-208ENST00000474116 DLEC1Q9Y238 1755 aa23.78■■□□□ 1.4
CUL4A-208ENST00000474116 GLTPD2A6NH11 291 aa23.78■■□□□ 1.4
CUL4A-208ENST00000474116 MRC1P22897 1456 aa23.77■■□□□ 1.4
CUL4A-208ENST00000474116 VEGFAP15692 232 aaPredicted RBP23.77■■□□□ 1.4
CUL4A-208ENST00000474116 SLC39A6Q13433 755 aa23.77■■□□□ 1.4
CUL4A-208ENST00000474116 COL15A1P39059 1388 aa23.77■■□□□ 1.4
CUL4A-208ENST00000474116 RNMTO43148 476 aaKnown RBP23.76■■□□□ 1.39
CUL4A-208ENST00000474116 SERPINB2P05120 415 aa23.76■■□□□ 1.39
CUL4A-208ENST00000474116 TRIM26Q12899 539 aaPredicted RBP23.76■■□□□ 1.39
CUL4A-208ENST00000474116 ZBTB1Q9Y2K1 713 aa23.76■■□□□ 1.39
CUL4A-208ENST00000474116 HSPA5P11021 654 aaKnown RBP23.75■■□□□ 1.39
CUL4A-208ENST00000474116 TTLL6Q8N841 843 aa23.75■■□□□ 1.39
CUL4A-208ENST00000474116 EIF4G2P78344 907 aaKnown RBP eCLIP23.74■■□□□ 1.393e-7■■■■□ 20.7
CUL4A-208ENST00000474116 C2CD5Q86YS7 1000 aa23.73■■□□□ 1.39
CUL4A-208ENST00000474116 VSIG10Q8N0Z9 540 aa23.73■■□□□ 1.39
CUL4A-208ENST00000474116 VIRMAQ69YN4 1812 aaKnown RBP23.73■■□□□ 1.39
CUL4A-208ENST00000474116 CCDC88AQ3V6T2 1871 aa23.73■■□□□ 1.39
CUL4A-208ENST00000474116 POTECB2RU33 542 aa23.72■■□□□ 1.39
CUL4A-208ENST00000474116 NFKBIEO00221 500 aa23.72■■□□□ 1.39
CUL4A-208ENST00000474116 TNS4Q8IZW8 715 aa23.72■■□□□ 1.39
CUL4A-208ENST00000474116 TIAM2Q8IVF5 1701 aa23.71■■□□□ 1.39
CUL4A-208ENST00000474116 CARMIL3Q8ND23 1372 aa23.71■■□□□ 1.39
CUL4A-208ENST00000474116 H0YIN7 160 aa23.7■■□□□ 1.38
CUL4A-208ENST00000474116 CAPN15O75808 1086 aa23.7■■□□□ 1.38
CUL4A-208ENST00000474116 CLSPNQ9HAW4 1339 aa23.69■■□□□ 1.38
CUL4A-208ENST00000474116 MTHFSDQ2M296 383 aaKnown RBP23.69■■□□□ 1.38
CUL4A-208ENST00000474116 KNSTRNQ9Y448 316 aa23.69■■□□□ 1.38
CUL4A-208ENST00000474116 UBR2Q8IWV8 1755 aa23.68■■□□□ 1.38
CUL4A-208ENST00000474116 HMOX1P09601 288 aa23.68■■□□□ 1.38
CUL4A-208ENST00000474116 CANXP27824 592 aaKnown RBP23.68■■□□□ 1.38
CUL4A-208ENST00000474116 EIF5P55010 431 aaKnown RBP23.68■■□□□ 1.38
CUL4A-208ENST00000474116 HSPA1AP0DMV8 641 aaKnown RBP23.67■■□□□ 1.38
CUL4A-208ENST00000474116 HSPA1BP0DMV9 641 aaKnown RBP23.67■■□□□ 1.38
CUL4A-208ENST00000474116 AMER1Q5JTC6 1135 aaPredicted RBP23.67■■□□□ 1.38
CUL4A-208ENST00000474116 ANKRD31Q8N7Z5 1873 aa23.66■■□□□ 1.38
CUL4A-208ENST00000474116 BICDL1Q6ZP65 573 aa23.65■■□□□ 1.38
CUL4A-208ENST00000474116 TBC1D9BQ66K14 1250 aa23.64■■□□□ 1.37
CUL4A-208ENST00000474116 DPY19L2Q6NUT2 758 aa23.64■■□□□ 1.37
CUL4A-208ENST00000474116 A0A087WZG4 1122 aa23.63■■□□□ 1.37
CUL4A-208ENST00000474116 STARD3NLO95772 234 aa23.63■■□□□ 1.37
CUL4A-208ENST00000474116 BRIP1Q9BX63 1249 aa23.63■■□□□ 1.37
CUL4A-208ENST00000474116 PDZRN3Q9UPQ7 1066 aa23.63■■□□□ 1.37
CUL4A-208ENST00000474116 DICER1Q9UPY3 1922 aaKnown RBP23.63■■□□□ 1.37
CUL4A-208ENST00000474116 FER1L6Q2WGJ9 1857 aa23.62■■□□□ 1.37
CUL4A-208ENST00000474116 C21orf2O43822 256 aa23.62■■□□□ 1.37
CUL4A-208ENST00000474116 ZNF622Q969S3 477 aaKnown RBP eCLIP23.62■■□□□ 1.37
CUL4A-208ENST00000474116 PDE6BP35913 854 aa23.61■■□□□ 1.37
CUL4A-208ENST00000474116 COL11A2P13942 1736 aaPredicted RBP23.6■■□□□ 1.37
CUL4A-208ENST00000474116 ERFEQ4G0M1 354 aa23.6■■□□□ 1.37
CUL4A-208ENST00000474116 PRR5LQ6MZQ0 368 aa23.6■■□□□ 1.37
CUL4A-208ENST00000474116 TTC5Q8N0Z6 440 aa23.59■■□□□ 1.37
CUL4A-208ENST00000474116 CCDC24Q8N4L8 307 aa23.59■■□□□ 1.37
CUL4A-208ENST00000474116 ZNF496Q96IT1 587 aaPredicted RBP23.59■■□□□ 1.37
CUL4A-208ENST00000474116 ZNF219Q9P2Y4 722 aaPredicted RBP23.59■■□□□ 1.37
CUL4A-208ENST00000474116 SCN7AQ01118 1682 aa23.59■■□□□ 1.37
CUL4A-208ENST00000474116 LTBP3Q9NS15 1303 aa23.59■■□□□ 1.37
CUL4A-208ENST00000474116 DIAPH1O60610 1272 aaKnown RBP23.58■■□□□ 1.37
CUL4A-208ENST00000474116 TBC1D2BQ9UPU7 963 aa23.58■■□□□ 1.37
CUL4A-208ENST00000474116 HEG1Q9ULI3 1381 aa23.57■■□□□ 1.36
CUL4A-208ENST00000474116 IL17REQ8NFR9 667 aa23.57■■□□□ 1.36
CUL4A-208ENST00000474116 TEX13AQ9BXU3 409 aaPredicted RBP23.57■■□□□ 1.36
CUL4A-208ENST00000474116 IL6STP40189 918 aaPredicted RBP23.56■■□□□ 1.36
CUL4A-208ENST00000474116 CHADLQ6NUI6 762 aa23.56■■□□□ 1.36
CUL4A-208ENST00000474116 ZNF790Q6PG37 636 aa23.56■■□□□ 1.36
CUL4A-208ENST00000474116 PCGF6Q9BYE7 350 aa23.56■■□□□ 1.36
CUL4A-208ENST00000474116 CREBZFQ9NS37 354 aa23.56■■□□□ 1.36
CUL4A-208ENST00000474116 SIPA1L3O60292 1781 aaPredicted RBP23.55■■□□□ 1.36
CUL4A-208ENST00000474116 SLX4Q8IY92 1834 aa23.54■■□□□ 1.36
CUL4A-208ENST00000474116 DDNO94850 711 aaPredicted RBP23.54■■□□□ 1.36
CUL4A-208ENST00000474116 POTEIP0CG38 1075 aa23.54■■□□□ 1.36
CUL4A-208ENST00000474116 POTEJP0CG39 1038 aa23.54■■□□□ 1.36
CUL4A-208ENST00000474116 TAOK3Q9H2K8 898 aa23.54■■□□□ 1.36
CUL4A-208ENST00000474116 PER1O15534 1290 aaPredicted RBP23.53■■□□□ 1.36
CUL4A-208ENST00000474116 CAMTA2O94983 1202 aa23.53■■□□□ 1.36
CUL4A-208ENST00000474116 STYK1Q6J9G0 422 aa23.53■■□□□ 1.36
CUL4A-208ENST00000474116 CNKSR1Q969H4 720 aa23.53■■□□□ 1.36
CUL4A-208ENST00000474116 A1BGP04217 495 aa23.52■■□□□ 1.36
CUL4A-208ENST00000474116 SRGNP10124 158 aa23.52■■□□□ 1.36
CUL4A-208ENST00000474116 TEFQ10587 303 aa23.52■■□□□ 1.36
CUL4A-208ENST00000474116 SETDB2Q96T68 719 aa23.52■■□□□ 1.36
CUL4A-208ENST00000474116 MKRN1Q9UHC7 482 aaKnown RBP23.52■■□□□ 1.36
CUL4A-208ENST00000474116 ZNF330Q9Y3S2 320 aaPredicted RBP23.52■■□□□ 1.36
CUL4A-208ENST00000474116 GNAT3A8MTJ3 354 aa23.51■■□□□ 1.35
CUL4A-208ENST00000474116 PRPF40BQ6NWY9 871 aaKnown RBP23.51■■□□□ 1.35
CUL4A-208ENST00000474116 CNBD1Q8NA66 436 aa23.51■■□□□ 1.35
CUL4A-208ENST00000474116 ARFGEF2Q9Y6D5 1785 aa23.5■■□□□ 1.35
CUL4A-208ENST00000474116 KIF7Q2M1P5 1343 aa23.5■■□□□ 1.35
CUL4A-208ENST00000474116 COL3A1P02461 1466 aaPredicted RBP23.49■■□□□ 1.35
CUL4A-208ENST00000474116 C7orf43Q8WVR3 580 aa23.49■■□□□ 1.35
CUL4A-208ENST00000474116 MASTLQ96GX5 879 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms