RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-211	ENST00000474088	GNAT3	A8MTJ3	354 aa		33.36	■■■□□ 2.93
PKD1-211	ENST00000474088	TTC5	Q8N0Z6	440 aa		33.36	■■■□□ 2.93
PKD1-211	ENST00000474088	IL17RE	Q8NFR9	667 aa		33.36	■■■□□ 2.93
PKD1-211	ENST00000474088	COL15A1	P39059	1388 aa		33.35	■■■□□ 2.93
PKD1-211	ENST00000474088	KIF3C	O14782	793 aa		33.33	■■■□□ 2.93
PKD1-211	ENST00000474088	TEF	Q10587	303 aa		33.33	■■■□□ 2.93
PKD1-211	ENST00000474088	DALRD3	Q5D0E6	543 aa	Known RBP	33.33	■■■□□ 2.93
PKD1-211	ENST00000474088	CHRNA5	P30532	468 aa		33.32	■■■□□ 2.92
PKD1-211	ENST00000474088	NFIX	Q14938	502 aa		33.32	■■■□□ 2.92
PKD1-211	ENST00000474088	STARD3NL	O95772	234 aa		33.31	■■■□□ 2.92
PKD1-211	ENST00000474088	CANX	P27824	592 aa	Known RBP	33.31	■■■□□ 2.92
PKD1-211	ENST00000474088	BCL2L12	Q9HB09	334 aa		33.31	■■■□□ 2.92
PKD1-211	ENST00000474088	UBR2	Q8IWV8	1755 aa		33.31	■■■□□ 2.92
PKD1-211	ENST00000474088	ZNF790	Q6PG37	636 aa		33.3	■■■□□ 2.92
PKD1-211	ENST00000474088	CFAP53	Q96M91	514 aa		33.3	■■■□□ 2.92
PKD1-211	ENST00000474088	ZNF496	Q96IT1	587 aa	Predicted RBP	33.29	■■■□□ 2.92
PKD1-211	ENST00000474088	ARFGEF1	Q9Y6D6	1849 aa		33.28	■■■□□ 2.92
PKD1-211	ENST00000474088	HSPA6	P17066	643 aa		33.27	■■■□□ 2.92
PKD1-211	ENST00000474088	EIF5	P55010	431 aa	Known RBP	33.27	■■■□□ 2.92
PKD1-211	ENST00000474088	PHACTR3	Q96KR7	559 aa		33.27	■■■□□ 2.92
PKD1-211	ENST00000474088	HEG1	Q9ULI3	1381 aa		33.26	■■■□□ 2.92
PKD1-211	ENST00000474088	PRKAR2B	P31323	418 aa		33.26	■■■□□ 2.91
PKD1-211	ENST00000474088	C9orf131	Q5VYM1	1079 aa		33.26	■■■□□ 2.91
PKD1-211	ENST00000474088	TEX13A	Q9BXU3	409 aa	Predicted RBP	33.26	■■■□□ 2.91
PKD1-211	ENST00000474088	SERPINB2	P05120	415 aa		33.25	■■■□□ 2.91
PKD1-211	ENST00000474088	RSPH6A	Q9H0K4	717 aa		33.25	■■■□□ 2.91
PKD1-211	ENST00000474088	NUDC	Q9Y266	331 aa		33.24	■■■□□ 2.91
PKD1-211	ENST00000474088	CEMIP	Q8WUJ3	1361 aa		33.23	■■■□□ 2.91
PKD1-211	ENST00000474088		A0A087WZG4	1122 aa		33.23	■■■□□ 2.91
PKD1-211	ENST00000474088	AFDN	P55196	1824 aa	Known RBP	33.21	■■■□□ 2.91
PKD1-211	ENST00000474088	PPP2R1A	P30153	589 aa		33.21	■■■□□ 2.91
PKD1-211	ENST00000474088	FMNL2	Q96PY5	1086 aa		33.21	■■■□□ 2.91
PKD1-211	ENST00000474088	NRXN2	Q9P2S2	1712 aa		33.21	■■■□□ 2.91
PKD1-211	ENST00000474088	SIPA1L3	O60292	1781 aa	Predicted RBP	33.21	■■■□□ 2.91
PKD1-211	ENST00000474088	BTBD11	A6QL63	1104 aa		33.18	■■■□□ 2.9
PKD1-211	ENST00000474088	TOMM70	O94826	608 aa		33.18	■■■□□ 2.9
PKD1-211	ENST00000474088	BICDL1	Q6ZP65	573 aa		33.18	■■■□□ 2.9
PKD1-211	ENST00000474088	NMRK2	Q9NPI5	230 aa		33.18	■■■□□ 2.9
PKD1-211	ENST00000474088	KCNQ3	O43525	872 aa		33.17	■■■□□ 2.9
PKD1-211	ENST00000474088	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.17	■■■□□ 2.9
PKD1-211	ENST00000474088	IL6ST	P40189	918 aa	Predicted RBP	33.17	■■■□□ 2.9
PKD1-211	ENST00000474088	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.17	■■■□□ 2.9
PKD1-211	ENST00000474088	RNF181	Q9P0P0	153 aa		33.17	■■■□□ 2.9
PKD1-211	ENST00000474088	A1BG	P04217	495 aa		33.15	■■■□□ 2.9
PKD1-211	ENST00000474088	TBC1D9B	Q66K14	1250 aa		33.15	■■■□□ 2.9
PKD1-211	ENST00000474088	TBC1D2B	Q9UPU7	963 aa		33.15	■■■□□ 2.9
PKD1-211	ENST00000474088	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.15	■■■□□ 2.9
PKD1-211	ENST00000474088	C2CD5	Q86YS7	1000 aa		33.13	■■■□□ 2.89
PKD1-211	ENST00000474088	TTLL6	Q8N841	843 aa		33.13	■■■□□ 2.89
PKD1-211	ENST00000474088	CARMIL3	Q8ND23	1372 aa		33.11	■■■□□ 2.89
PKD1-211	ENST00000474088		H0YIN7	160 aa		33.11	■■■□□ 2.89
PKD1-211	ENST00000474088	NPM2	Q86SE8	214 aa	Known RBP	33.11	■■■□□ 2.89
PKD1-211	ENST00000474088	RTF1	Q92541	710 aa	Known RBP	33.11	■■■□□ 2.89
PKD1-211	ENST00000474088	USP16	Q9Y5T5	823 aa		33.1	■■■□□ 2.89
PKD1-211	ENST00000474088	MCM10	Q7L590	875 aa		33.09	■■■□□ 2.89
PKD1-211	ENST00000474088	KDM2B	Q8NHM5	1336 aa		33.08	■■■□□ 2.89
PKD1-211	ENST00000474088	DLEC1	Q9Y238	1755 aa		33.07	■■■□□ 2.88
PKD1-211	ENST00000474088	RASSF7	Q02833	373 aa		33.07	■■■□□ 2.88
PKD1-211	ENST00000474088	SBF1	O95248	1867 aa		33.07	■■■□□ 2.88
PKD1-211	ENST00000474088	CAMTA2	O94983	1202 aa		33.06	■■■□□ 2.88
PKD1-211	ENST00000474088	BRIP1	Q9BX63	1249 aa		33.06	■■■□□ 2.88
PKD1-211	ENST00000474088	SCN7A	Q01118	1682 aa		33.06	■■■□□ 2.88
PKD1-211	ENST00000474088	HTATSF1	O43719	755 aa	Known RBP	33.05	■■■□□ 2.88
PKD1-211	ENST00000474088	APLP1	P51693	650 aa		33.05	■■■□□ 2.88
PKD1-211	ENST00000474088	PRR5L	Q6MZQ0	368 aa		33.05	■■■□□ 2.88
PKD1-211	ENST00000474088	PDZRN3	Q9UPQ7	1066 aa		33.05	■■■□□ 2.88
PKD1-211	ENST00000474088	PRAMEF22	A3QJZ6	481 aa		33.04	■■■□□ 2.88
PKD1-211	ENST00000474088	PDE6B	P35913	854 aa		33.04	■■■□□ 2.88
PKD1-211	ENST00000474088	DCTN1	Q14203	1278 aa		33.04	■■■□□ 2.88
PKD1-211	ENST00000474088	C16orf71	Q8IYS4	520 aa	Predicted RBP	33.04	■■■□□ 2.88
PKD1-211	ENST00000474088	RBM46	Q8TBY0	533 aa	Known RBP	33.04	■■■□□ 2.88
PKD1-211	ENST00000474088	SETDB2	Q96T68	719 aa		33.04	■■■□□ 2.88
PKD1-211	ENST00000474088	SNRPA1	P09661	255 aa	Known RBP	33.03	■■■□□ 2.88
PKD1-211	ENST00000474088	LMNB1	P20700	586 aa		33.03	■■■□□ 2.88
PKD1-211	ENST00000474088	DZIP3	Q86Y13	1208 aa	Known RBP	33.03	■■■□□ 2.88
PKD1-211	ENST00000474088	CCDC24	Q8N4L8	307 aa		33.03	■■■□□ 2.88
PKD1-211	ENST00000474088	RRAGC	Q9HB90	399 aa		33.03	■■■□□ 2.88
PKD1-211	ENST00000474088	PRELP	P51888	382 aa		33.02	■■■□□ 2.88
PKD1-211	ENST00000474088	CEP350	Q5VT06	3117 aa		33.02	■■■□□ 2.88
PKD1-211	ENST00000474088	ZC3H4	Q9UPT8	1303 aa	Known RBP	33.02	■■■□□ 2.88
PKD1-211	ENST00000474088	PIP4K2A	P48426	406 aa	Predicted RBP	33.01	■■■□□ 2.87
PKD1-211	ENST00000474088	ZNF622	Q969S3	477 aa	Known RBP eCLIP	33.01	■■■□□ 2.87
PKD1-211	ENST00000474088	ANKRD31	Q8N7Z5	1873 aa		32.99	■■■□□ 2.87
PKD1-211	ENST00000474088	CNBD1	Q8NA66	436 aa		32.98	■■■□□ 2.87
PKD1-211	ENST00000474088	NFKBIE	O00221	500 aa		32.97	■■■□□ 2.87
PKD1-211	ENST00000474088	TAF7	Q15545	349 aa	Predicted RBP	32.97	■■■□□ 2.87
PKD1-211	ENST00000474088	NPHP1	O15259	732 aa		32.96	■■■□□ 2.87
PKD1-211	ENST00000474088	CLEC4G	Q6UXB4	293 aa		32.96	■■■□□ 2.87
PKD1-211	ENST00000474088	FSTL1	Q12841	308 aa		32.95	■■■□□ 2.87
PKD1-211	ENST00000474088	GLTPD2	A6NH11	291 aa		32.94	■■■□□ 2.86
PKD1-211	ENST00000474088	C21orf2	O43822	256 aa		32.94	■■■□□ 2.86
PKD1-211	ENST00000474088	ST5	P78524	1137 aa		32.94	■■■□□ 2.86
PKD1-211	ENST00000474088	BCOR	Q6W2J9	1755 aa		32.93	■■■□□ 2.86
PKD1-211	ENST00000474088	NBPF26	B4DH59	902 aa		32.93	■■■□□ 2.86
PKD1-211	ENST00000474088	NEFM	P07197	916 aa		32.93	■■■□□ 2.86
PKD1-211	ENST00000474088	NBPF10	Q6P3W6	841 aa	Known RBP	32.93	■■■□□ 2.86
PKD1-211	ENST00000474088	NBPF15	Q8N660	670 aa		32.93	■■■□□ 2.86
PKD1-211	ENST00000474088	DNAJC5G	Q8N7S2	189 aa		32.93	■■■□□ 2.86
PKD1-211	ENST00000474088	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.93	■■■□□ 2.86
PKD1-211	ENST00000474088	MIS18A	Q9NYP9	233 aa		32.92	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms