RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 PLEKHG5O94827 1062 aa17.15■□□□□ 0.34
NHLRC3-204ENST00000473371 ZSCAN22P10073 491 aaPredicted RBP17.15■□□□□ 0.34
NHLRC3-204ENST00000473371 USP31Q70CQ4 1352 aa17.15■□□□□ 0.34
NHLRC3-204ENST00000473371 LETM1O95202 739 aaPredicted RBP17.15■□□□□ 0.34
NHLRC3-204ENST00000473371 ADCY5O95622 1261 aa17.15■□□□□ 0.34
NHLRC3-204ENST00000473371 ROBO2Q9HCK4 1378 aa17.15■□□□□ 0.34
NHLRC3-204ENST00000473371 USP44Q9H0E7 712 aa17.14■□□□□ 0.33
NHLRC3-204ENST00000473371 SOS1Q07889 1333 aaPredicted RBP17.14■□□□□ 0.33
NHLRC3-204ENST00000473371 SURF6O75683 361 aaKnown RBP17.14■□□□□ 0.33
NHLRC3-204ENST00000473371 HCLS1P14317 486 aaPredicted RBP17.14■□□□□ 0.33
NHLRC3-204ENST00000473371 SNX14Q9Y5W7 946 aa17.14■□□□□ 0.33
NHLRC3-204ENST00000473371 RAD50Q92878 1312 aa17.13■□□□□ 0.33
NHLRC3-204ENST00000473371 AMPHP49418 695 aa17.13■□□□□ 0.33
NHLRC3-204ENST00000473371 PIBF1Q8WXW3 757 aa17.13■□□□□ 0.33
NHLRC3-204ENST00000473371 EYA1Q99502 592 aa17.13■□□□□ 0.33
NHLRC3-204ENST00000473371 LARP6Q9BRS8 491 aaKnown RBP17.13■□□□□ 0.33
NHLRC3-204ENST00000473371 ADAMTSL3P82987 1691 aa17.13■□□□□ 0.33
NHLRC3-204ENST00000473371 SGSM2O43147 1006 aa17.13■□□□□ 0.33
NHLRC3-204ENST00000473371 STX6O43752 255 aa17.13■□□□□ 0.33
NHLRC3-204ENST00000473371 RAB11FIP3O75154 756 aa17.13■□□□□ 0.33
NHLRC3-204ENST00000473371 AK2P54819 239 aa17.13■□□□□ 0.33
NHLRC3-204ENST00000473371 UBE2HP62256 183 aa17.13■□□□□ 0.33
NHLRC3-204ENST00000473371 MYRIPQ8NFW9 859 aa17.13■□□□□ 0.33
NHLRC3-204ENST00000473371 TTC12Q9H892 705 aaPredicted RBP17.13■□□□□ 0.33
NHLRC3-204ENST00000473371 SMC3Q9UQE7 1217 aa17.13■□□□□ 0.33
NHLRC3-204ENST00000473371 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.13■□□□□ 0.33
NHLRC3-204ENST00000473371 XRN1Q8IZH2 1706 aaKnown RBP17.12■□□□□ 0.33
NHLRC3-204ENST00000473371 NOLC1Q14978 699 aaKnown RBP eCLIP17.12■□□□□ 0.33
NHLRC3-204ENST00000473371 SSH3Q8TE77 659 aa17.12■□□□□ 0.33
NHLRC3-204ENST00000473371 FLT4P35916 1363 aa17.12■□□□□ 0.33
NHLRC3-204ENST00000473371 FIBPO43427 364 aa17.12■□□□□ 0.33
NHLRC3-204ENST00000473371 SYT1P21579 422 aa17.12■□□□□ 0.33
NHLRC3-204ENST00000473371 LIMCH1Q9UPQ0 1083 aa17.12■□□□□ 0.33
NHLRC3-204ENST00000473371 NALCNQ8IZF0 1738 aa17.12■□□□□ 0.33
NHLRC3-204ENST00000473371 PPP1R42Q7Z4L9 355 aa17.11■□□□□ 0.33
NHLRC3-204ENST00000473371 SBNO1A3KN83 1393 aa17.11■□□□□ 0.33
NHLRC3-204ENST00000473371 KDRP35968 1356 aa17.11■□□□□ 0.33
NHLRC3-204ENST00000473371 GNAT3A8MTJ3 354 aa17.11■□□□□ 0.33
NHLRC3-204ENST00000473371 HTATSF1O43719 755 aaKnown RBP17.11■□□□□ 0.33
NHLRC3-204ENST00000473371 PLCB2Q00722 1185 aa17.11■□□□□ 0.33
NHLRC3-204ENST00000473371 TTC14Q96N46 770 aa17.11■□□□□ 0.33
NHLRC3-204ENST00000473371 ATP6V1DQ9Y5K8 247 aa17.11■□□□□ 0.33
NHLRC3-204ENST00000473371 F13A1P00488 732 aa17.11■□□□□ 0.33
NHLRC3-204ENST00000473371 CNTROBQ8N137 903 aa17.11■□□□□ 0.33
NHLRC3-204ENST00000473371 PI4K2BQ8TCG2 481 aa17.11■□□□□ 0.33
NHLRC3-204ENST00000473371 RHPN1Q8TCX5 695 aa17.11■□□□□ 0.33
NHLRC3-204ENST00000473371 ESF1Q9H501 851 aaKnown RBP17.11■□□□□ 0.33
NHLRC3-204ENST00000473371 FAM208AQ9UK61 1670 aaKnown RBP17.11■□□□□ 0.33
NHLRC3-204ENST00000473371 FAM69CQ0P6D2 419 aa17.1■□□□□ 0.33
NHLRC3-204ENST00000473371 RUFY3Q7L099 469 aa17.1■□□□□ 0.33
NHLRC3-204ENST00000473371 RASEFQ8IZ41 740 aa17.1■□□□□ 0.33
NHLRC3-204ENST00000473371 IGSF1Q8N6C5 1336 aa17.1■□□□□ 0.33
NHLRC3-204ENST00000473371 PRIMPOLQ96LW4 560 aa17.1■□□□□ 0.33
NHLRC3-204ENST00000473371 LSG1Q9H089 658 aaKnown RBP17.1■□□□□ 0.33
NHLRC3-204ENST00000473371 C17orf53Q8N3J3 647 aaPredicted RBP17.09■□□□□ 0.33
NHLRC3-204ENST00000473371 HMGN5P82970 282 aaKnown RBP17.09■□□□□ 0.33
NHLRC3-204ENST00000473371 CEP170BQ9Y4F5 1589 aaPredicted RBP17.09■□□□□ 0.33
NHLRC3-204ENST00000473371 FMN2Q9NZ56 1722 aa17.09■□□□□ 0.33
NHLRC3-204ENST00000473371 KDM4AO75164 1064 aa17.09■□□□□ 0.33
NHLRC3-204ENST00000473371 CWC27Q6UX04 472 aaKnown RBP17.09■□□□□ 0.33
NHLRC3-204ENST00000473371 KIF1BPQ96EK5 621 aa17.09■□□□□ 0.33
NHLRC3-204ENST00000473371 FER1L4A9Z1Z3 1794 aa17.08■□□□□ 0.33
NHLRC3-204ENST00000473371 SPG7Q9UQ90 795 aa17.08■□□□□ 0.33
NHLRC3-204ENST00000473371 SRGAP3O43295 1099 aa17.08■□□□□ 0.32
NHLRC3-204ENST00000473371 HDGFL1Q5TGJ6 251 aa17.08■□□□□ 0.32
NHLRC3-204ENST00000473371 GIMAP6Q6P9H5 292 aa17.08■□□□□ 0.32
NHLRC3-204ENST00000473371 PHAXQ9H814 394 aaKnown RBP17.08■□□□□ 0.32
NHLRC3-204ENST00000473371 ZNF142P52746 1687 aaPredicted RBP17.08■□□□□ 0.32
NHLRC3-204ENST00000473371 TTC21AQ8NDW8 1320 aa17.08■□□□□ 0.32
NHLRC3-204ENST00000473371 CPA1P15085 419 aa17.08■□□□□ 0.32
NHLRC3-204ENST00000473371 CASTP20810 708 aaKnown RBP17.08■□□□□ 0.32
NHLRC3-204ENST00000473371 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.07■□□□□ 0.32
NHLRC3-204ENST00000473371 PXDNLA1KZ92 1463 aa17.07■□□□□ 0.32
NHLRC3-204ENST00000473371 TOPAZ1Q8N9V7 1692 aa17.07■□□□□ 0.32
NHLRC3-204ENST00000473371 POLA2Q14181 598 aa17.07■□□□□ 0.32
NHLRC3-204ENST00000473371 TAF7Q15545 349 aaPredicted RBP17.07■□□□□ 0.32
NHLRC3-204ENST00000473371 CCDC83Q8IWF9 413 aa17.07■□□□□ 0.32
NHLRC3-204ENST00000473371 JARID2Q92833 1246 aaPredicted RBP17.07■□□□□ 0.32
NHLRC3-204ENST00000473371 CACNA1FO60840 1977 aa17.06■□□□□ 0.32
NHLRC3-204ENST00000473371 IL17REQ8NFR9 667 aa17.06■□□□□ 0.32
NHLRC3-204ENST00000473371 TSC1Q92574 1164 aa17.06■□□□□ 0.32
NHLRC3-204ENST00000473371 LARGE1O95461 756 aa17.06■□□□□ 0.32
NHLRC3-204ENST00000473371 GJB2P29033 226 aa17.06■□□□□ 0.32
NHLRC3-204ENST00000473371 NGDNQ8NEJ9 315 aaKnown RBP17.06■□□□□ 0.32
NHLRC3-204ENST00000473371 DIAPH3Q9NSV4 1193 aa17.06■□□□□ 0.32
NHLRC3-204ENST00000473371 DNM1Q05193 864 aaKnown RBP17.05■□□□□ 0.32
NHLRC3-204ENST00000473371 CCDC94Q9BW85 323 aaPredicted RBP17.05■□□□□ 0.32
NHLRC3-204ENST00000473371 DTNBO60941 627 aa17.05■□□□□ 0.32
NHLRC3-204ENST00000473371 OS9Q13438 667 aaPredicted RBP17.05■□□□□ 0.32
NHLRC3-204ENST00000473371 SMAP1Q8IYB5 467 aaPredicted RBP17.04■□□□□ 0.32
NHLRC3-204ENST00000473371 PDRG1Q9NUG6 133 aa17.04■□□□□ 0.32
NHLRC3-204ENST00000473371 SPTLC3Q9NUV7 552 aa17.04■□□□□ 0.32
NHLRC3-204ENST00000473371 MAP3K5Q99683 1374 aa17.04■□□□□ 0.32
NHLRC3-204ENST00000473371 EIF2S2P20042 333 aaKnown RBP17.04■□□□□ 0.32
NHLRC3-204ENST00000473371 FUCA2Q9BTY2 467 aa17.04■□□□□ 0.32
NHLRC3-204ENST00000473371 HYPKQ9NX55 129 aa17.04■□□□□ 0.32
NHLRC3-204ENST00000473371 MTMR6Q9Y217 621 aa17.04■□□□□ 0.32
NHLRC3-204ENST00000473371 RUFY2Q8WXA3 655 aa17.04■□□□□ 0.32
NHLRC3-204ENST00000473371 JAKMIP1Q96N16 626 aaKnown RBP17.04■□□□□ 0.32
NHLRC3-204ENST00000473371 LRRC37A3O60309 1634 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms