RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 BCORQ6W2J9 1755 aa16.13■□□□□ 0.17
TRAPPC12-217ENST00000473348 TCERG1O14776 1098 aaKnown RBP16.13■□□□□ 0.17
TRAPPC12-217ENST00000473348 PLSCR1O15162 318 aa16.13■□□□□ 0.17
TRAPPC12-217ENST00000473348 SF3B2Q13435 895 aaKnown RBP16.13■□□□□ 0.17
TRAPPC12-217ENST00000473348 ITPK1Q13572 414 aa16.13■□□□□ 0.17
TRAPPC12-217ENST00000473348 CCDC30Q5VVM6 783 aa16.13■□□□□ 0.17
TRAPPC12-217ENST00000473348 RARSP54136 660 aaKnown RBP16.12■□□□□ 0.17
TRAPPC12-217ENST00000473348 KCNQ4P56696 695 aa16.12■□□□□ 0.17
TRAPPC12-217ENST00000473348 SSH1Q8WYL5 1049 aa16.12■□□□□ 0.17
TRAPPC12-217ENST00000473348 BCL2L13Q9BXK5 485 aa16.12■□□□□ 0.17
TRAPPC12-217ENST00000473348 CHMP4AQ9BY43 222 aa16.12■□□□□ 0.17
TRAPPC12-217ENST00000473348 ANKRD36CQ5JPF3 1778 aa16.12■□□□□ 0.17
TRAPPC12-217ENST00000473348 NUP98P52948 1817 aa16.11■□□□□ 0.17
TRAPPC12-217ENST00000473348 AFDNP55196 1824 aaKnown RBP16.11■□□□□ 0.17
TRAPPC12-217ENST00000473348 STARD3NLO95772 234 aa16.11■□□□□ 0.17
TRAPPC12-217ENST00000473348 BAG6P46379 1132 aa16.11■□□□□ 0.17
TRAPPC12-217ENST00000473348 TXNRD1Q16881 649 aa16.11■□□□□ 0.17
TRAPPC12-217ENST00000473348 ALDH1L2Q3SY69 923 aa16.11■□□□□ 0.17
TRAPPC12-217ENST00000473348 LINC00116Q8NCU8 138 aa16.11■□□□□ 0.17
TRAPPC12-217ENST00000473348 STK31Q9BXU1 1019 aa16.11■□□□□ 0.17
TRAPPC12-217ENST00000473348 SMC4Q9NTJ3 1288 aa16.11■□□□□ 0.17
TRAPPC12-217ENST00000473348 CHPF2Q9P2E5 772 aa16.11■□□□□ 0.17
TRAPPC12-217ENST00000473348 ERBB4Q15303 1308 aa16.11■□□□□ 0.17
TRAPPC12-217ENST00000473348 CYP19A1P11511 503 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC12-217ENST00000473348 SLC27A3Q5K4L6 730 aa16.1■□□□□ 0.17
TRAPPC12-217ENST00000473348 ILDR2Q71H61 639 aa16.1■□□□□ 0.17
TRAPPC12-217ENST00000473348 CCDC125Q86Z20 511 aa16.1■□□□□ 0.17
TRAPPC12-217ENST00000473348 SCN7AQ01118 1682 aa16.1■□□□□ 0.17
TRAPPC12-217ENST00000473348 LRRC4BQ9NT99 713 aa16.09■□□□□ 0.17
TRAPPC12-217ENST00000473348 DBF4Q9UBU7 674 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC12-217ENST00000473348 BCAR3O75815 825 aa16.08■□□□□ 0.16
TRAPPC12-217ENST00000473348 ANXA1P04083 346 aa16.08■□□□□ 0.16
TRAPPC12-217ENST00000473348 A1BGP04217 495 aa16.08■□□□□ 0.16
TRAPPC12-217ENST00000473348 PIP4K2AP48426 406 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC12-217ENST00000473348 EN1Q05925 392 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC12-217ENST00000473348 PROSER3Q2NL68 480 aa16.08■□□□□ 0.16
TRAPPC12-217ENST00000473348 PROM2Q8N271 834 aa16.08■□□□□ 0.16
TRAPPC12-217ENST00000473348 MRPL50Q8N5N7 158 aaKnown RBP16.08■□□□□ 0.16
TRAPPC12-217ENST00000473348 DDX21Q9NR30 783 aaKnown RBP eCLIP16.08■□□□□ 0.16
TRAPPC12-217ENST00000473348 CCDC87Q9NVE4 849 aa16.08■□□□□ 0.16
TRAPPC12-217ENST00000473348 CNTNAP4Q9C0A0 1308 aa16.08■□□□□ 0.16
TRAPPC12-217ENST00000473348 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
TRAPPC12-217ENST00000473348 CRKLP46109 303 aaKnown RBP16.07■□□□□ 0.16
TRAPPC12-217ENST00000473348 EZH2Q15910 746 aaKnown RBP16.07■□□□□ 0.16
TRAPPC12-217ENST00000473348 DEFB132Q7Z7B7 95 aa16.07■□□□□ 0.16
TRAPPC12-217ENST00000473348 CAMKK2Q96RR4 588 aa16.07■□□□□ 0.16
TRAPPC12-217ENST00000473348 ZBTB1Q9Y2K1 713 aa16.07■□□□□ 0.16
TRAPPC12-217ENST00000473348 KIF16BQ96L93 1317 aa16.06■□□□□ 0.16
TRAPPC12-217ENST00000473348 NBPF26B4DH59 902 aa16.06■□□□□ 0.16
TRAPPC12-217ENST00000473348 MYL6BP14649 208 aa16.06■□□□□ 0.16
TRAPPC12-217ENST00000473348 PDIA6Q15084 440 aa16.06■□□□□ 0.16
TRAPPC12-217ENST00000473348 NBPF14Q5TI25 921 aa16.06■□□□□ 0.16
TRAPPC12-217ENST00000473348 NBPF10Q6P3W6 841 aaKnown RBP16.06■□□□□ 0.16
TRAPPC12-217ENST00000473348 NBPF15Q8N660 670 aa16.06■□□□□ 0.16
TRAPPC12-217ENST00000473348 UPF1Q92900 1129 aaKnown RBP eCLIP16.06■□□□□ 0.16
TRAPPC12-217ENST00000473348 CANXP27824 592 aaKnown RBP16.05■□□□□ 0.16
TRAPPC12-217ENST00000473348 INTS5Q6P9B9 1019 aaKnown RBP16.05■□□□□ 0.16
TRAPPC12-217ENST00000473348 G2E3Q7L622 706 aa16.05■□□□□ 0.16
TRAPPC12-217ENST00000473348 HYPKQ9NX55 129 aa16.05■□□□□ 0.16
TRAPPC12-217ENST00000473348 HMGB2P26583 209 aaKnown RBP16.04■□□□□ 0.16
TRAPPC12-217ENST00000473348 BRPF1P55201 1214 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC12-217ENST00000473348 RC3H1Q5TC82 1133 aaKnown RBP16.04■□□□□ 0.16
TRAPPC12-217ENST00000473348 COL15A1P39059 1388 aa16.03■□□□□ 0.16
TRAPPC12-217ENST00000473348 IL6STP40189 918 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC12-217ENST00000473348 FLIIQ13045 1269 aa16.03■□□□□ 0.16
TRAPPC12-217ENST00000473348 LRP10Q7Z4F1 713 aa16.03■□□□□ 0.16
TRAPPC12-217ENST00000473348 FRAT1Q92837 279 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC12-217ENST00000473348 AK7Q96M32 723 aa16.03■□□□□ 0.16
TRAPPC12-217ENST00000473348 PHAXQ9H814 394 aaKnown RBP16.03■□□□□ 0.16
TRAPPC12-217ENST00000473348 ZNF330Q9Y3S2 320 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC12-217ENST00000473348 GNPATO15228 680 aa16.02■□□□□ 0.16
TRAPPC12-217ENST00000473348 XAGE3Q8WTP9 111 aa16.02■□□□□ 0.16
TRAPPC12-217ENST00000473348 NOB1Q9ULX3 412 aaKnown RBP16.02■□□□□ 0.16
TRAPPC12-217ENST00000473348 PTPRCP08575 1304 aa16.01■□□□□ 0.15
TRAPPC12-217ENST00000473348 EIF5P55010 431 aaKnown RBP16.01■□□□□ 0.15
TRAPPC12-217ENST00000473348 RRP1P56182 461 aaKnown RBP16.01■□□□□ 0.15
TRAPPC12-217ENST00000473348 FKBP5Q13451 457 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC12-217ENST00000473348 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC12-217ENST00000473348 SUPT16HQ9Y5B9 1047 aaKnown RBP16.01■□□□□ 0.15
TRAPPC12-217ENST00000473348 PXDNLA1KZ92 1463 aa16■□□□□ 0.15
TRAPPC12-217ENST00000473348 RPS6KA4O75676 772 aa16■□□□□ 0.15
TRAPPC12-217ENST00000473348 AIMP1Q12904 312 aaKnown RBP16■□□□□ 0.15
TRAPPC12-217ENST00000473348 ZNF827Q17R98 1081 aa16■□□□□ 0.15
TRAPPC12-217ENST00000473348 ZKSCAN2Q63HK3 967 aa16■□□□□ 0.15
TRAPPC12-217ENST00000473348 COPS6Q7L5N1 327 aa16■□□□□ 0.15
TRAPPC12-217ENST00000473348 NPM2Q86SE8 214 aaKnown RBP16■□□□□ 0.15
TRAPPC12-217ENST00000473348 RTCBQ9Y3I0 505 aaKnown RBP16■□□□□ 0.15
TRAPPC12-217ENST00000473348 RNF123Q5XPI4 1314 aa15.99■□□□□ 0.15
TRAPPC12-217ENST00000473348 IPO8O15397 1037 aaKnown RBP15.99■□□□□ 0.15
TRAPPC12-217ENST00000473348 PLIN1O60240 522 aa15.99■□□□□ 0.15
TRAPPC12-217ENST00000473348 AKT1S1Q96B36 256 aa15.99■□□□□ 0.15
TRAPPC12-217ENST00000473348 CASZ1Q86V15 1759 aa15.99■□□□□ 0.15
TRAPPC12-217ENST00000473348 COL24A1Q17RW2 1714 aa15.99■□□□□ 0.15
TRAPPC12-217ENST00000473348 ADCY9O60503 1353 aa15.99■□□□□ 0.15
TRAPPC12-217ENST00000473348 DDX58O95786 925 aaKnown RBP15.98■□□□□ 0.15
TRAPPC12-217ENST00000473348 ATF7IPQ6VMQ6 1270 aa15.98■□□□□ 0.15
TRAPPC12-217ENST00000473348 KIF6Q6ZMV9 814 aa15.98■□□□□ 0.15
TRAPPC12-217ENST00000473348 TTLL7Q6ZT98 887 aa15.98■□□□□ 0.15
TRAPPC12-217ENST00000473348 AMIGO3Q86WK7 504 aa15.98■□□□□ 0.15
TRAPPC12-217ENST00000473348 ARHGAP45Q92619 1136 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms