RNA–Protein interactions for RNA: ENST00000473259.1

UBFD1P1-201, Transcript of ubiquitin family domain containing 1 pseudogene 1, humanhuman

BASIC

Gene UBFD1P1, Length 814 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1P1-201ENST00000473259 SYTL4Q96C24 671 aaPredicted RBP8.29□□□□□ -1.08
UBFD1P1-201ENST00000473259 CDCA7Q9BWT1 371 aaPredicted RBP8.29□□□□□ -1.08
UBFD1P1-201ENST00000473259 GTF3C3Q9Y5Q9 886 aa8.29□□□□□ -1.08
UBFD1P1-201ENST00000473259 USP47Q96K76 1375 aa8.29□□□□□ -1.08
UBFD1P1-201ENST00000473259 C5P01031 1676 aa8.29□□□□□ -1.08
UBFD1P1-201ENST00000473259 MAP2P11137 1827 aaKnown RBP8.29□□□□□ -1.08
UBFD1P1-201ENST00000473259 ANKRD36BQ8N2N9 1353 aa8.28□□□□□ -1.08
UBFD1P1-201ENST00000473259 FAM205CA6NFA0 338 aa8.28□□□□□ -1.08
UBFD1P1-201ENST00000473259 SLC34A2O95436 690 aa8.28□□□□□ -1.08
UBFD1P1-201ENST00000473259 ARSIQ5FYB1 569 aa8.28□□□□□ -1.08
UBFD1P1-201ENST00000473259 MSL1Q68DK7 614 aa8.28□□□□□ -1.08
UBFD1P1-201ENST00000473259 CDAN1Q8IWY9 1227 aa8.28□□□□□ -1.08
UBFD1P1-201ENST00000473259 EMILIN1Q9Y6C2 1016 aa8.28□□□□□ -1.08
UBFD1P1-201ENST00000473259 PKD1L3Q7Z443 1732 aa8.27□□□□□ -1.09
UBFD1P1-201ENST00000473259 ANKRD26Q9UPS8 1709 aa8.27□□□□□ -1.09
UBFD1P1-201ENST00000473259 AMPHP49418 695 aa8.27□□□□□ -1.09
UBFD1P1-201ENST00000473259 DSG2Q14126 1118 aa8.27□□□□□ -1.09
UBFD1P1-201ENST00000473259 COG3Q96JB2 828 aa8.27□□□□□ -1.09
UBFD1P1-201ENST00000473259 MTFR1LQ9H019 292 aa8.27□□□□□ -1.09
UBFD1P1-201ENST00000473259 CRISPLD2Q9H0B8 497 aa8.27□□□□□ -1.09
UBFD1P1-201ENST00000473259 TERF2IPQ9NYB0 399 aa8.27□□□□□ -1.09
UBFD1P1-201ENST00000473259 NBR1Q14596 966 aa8.26□□□□□ -1.09
UBFD1P1-201ENST00000473259 ZNF784Q8NCA9 323 aaPredicted RBP8.26□□□□□ -1.09
UBFD1P1-201ENST00000473259 WWC3Q9ULE0 1092 aa8.26□□□□□ -1.09
UBFD1P1-201ENST00000473259 NSD3Q9BZ95 1437 aa8.26□□□□□ -1.09
UBFD1P1-201ENST00000473259 UBR3Q6ZT12 1888 aa8.26□□□□□ -1.09
UBFD1P1-201ENST00000473259 CYP27B1O15528 508 aa8.25□□□□□ -1.09
UBFD1P1-201ENST00000473259 COL23A1Q86Y22 540 aaPredicted RBP8.25□□□□□ -1.09
UBFD1P1-201ENST00000473259 ZCRB1Q8TBF4 217 aaKnown RBP8.25□□□□□ -1.09
UBFD1P1-201ENST00000473259 LARP6Q9BRS8 491 aaKnown RBP8.25□□□□□ -1.09
UBFD1P1-201ENST00000473259 C4BP0C0L5 1744 aa8.24□□□□□ -1.09
UBFD1P1-201ENST00000473259 C11orf95C9JLR9 678 aaPredicted RBP8.24□□□□□ -1.09
UBFD1P1-201ENST00000473259 TBC1D12O60347 775 aa8.24□□□□□ -1.09
UBFD1P1-201ENST00000473259 YBX3P16989 372 aaKnown RBP eCLIP8.24□□□□□ -1.09
UBFD1P1-201ENST00000473259 HS3ST6Q96QI5 342 aa8.24□□□□□ -1.09
UBFD1P1-201ENST00000473259 PCDHGA4Q9Y5G9 962 aa8.24□□□□□ -1.09
UBFD1P1-201ENST00000473259 PPP1R15BQ5SWA1 713 aa8.23□□□□□ -1.09
UBFD1P1-201ENST00000473259 PUS7Q96PZ0 661 aaKnown RBP8.23□□□□□ -1.09
UBFD1P1-201ENST00000473259 CCNL1Q9UK58 526 aaPredicted RBP8.23□□□□□ -1.09
UBFD1P1-201ENST00000473259 KIAA1551Q9HCM1 1747 aa8.23□□□□□ -1.09
UBFD1P1-201ENST00000473259 RTL1A6NKG5 1358 aa8.22□□□□□ -1.09
UBFD1P1-201ENST00000473259 TNNT2P45379 298 aaPredicted RBP8.22□□□□□ -1.09
UBFD1P1-201ENST00000473259 PTCD2Q8WV60 388 aaKnown RBP8.22□□□□□ -1.09
UBFD1P1-201ENST00000473259 KHSRPQ92945 711 aaKnown RBP eCLIP8.22□□□□□ -1.09
UBFD1P1-201ENST00000473259 POLR3GLQ9BT43 218 aa8.22□□□□□ -1.09
UBFD1P1-201ENST00000473259 TFCP2L1Q9NZI6 479 aa8.22□□□□□ -1.09
UBFD1P1-201ENST00000473259 INSRP06213 1382 aa8.22□□□□□ -1.09
UBFD1P1-201ENST00000473259 NCAPD2Q15021 1401 aa8.21□□□□□ -1.09
UBFD1P1-201ENST00000473259 N4BP2Q86UW6 1770 aaPredicted RBP8.21□□□□□ -1.1
UBFD1P1-201ENST00000473259 PPM1GO15355 546 aaPredicted RBP8.21□□□□□ -1.1
UBFD1P1-201ENST00000473259 TMF1P82094 1093 aa8.21□□□□□ -1.1
UBFD1P1-201ENST00000473259 MPRIPQ6WCQ1 1025 aa8.21□□□□□ -1.1
UBFD1P1-201ENST00000473259 LINC00116Q8NCU8 138 aa8.21□□□□□ -1.1
UBFD1P1-201ENST00000473259 DDX27Q96GQ7 796 aaKnown RBP8.21□□□□□ -1.1
UBFD1P1-201ENST00000473259 FLT4P35916 1363 aa8.21□□□□□ -1.1
UBFD1P1-201ENST00000473259 PALLDQ8WX93 1383 aa8.21□□□□□ -1.1
UBFD1P1-201ENST00000473259 POTEB3A0JP26 581 aa8.2□□□□□ -1.1
UBFD1P1-201ENST00000473259 PHF14O94880 888 aa8.2□□□□□ -1.1
UBFD1P1-201ENST00000473259 NUDT7P0C024 238 aa8.2□□□□□ -1.1
UBFD1P1-201ENST00000473259 TATP17735 454 aaPredicted RBP8.2□□□□□ -1.1
UBFD1P1-201ENST00000473259 ITPK1Q13572 414 aa8.2□□□□□ -1.1
UBFD1P1-201ENST00000473259 GPR162Q16538 588 aa8.2□□□□□ -1.1
UBFD1P1-201ENST00000473259 VARS2Q5ST30 1063 aaKnown RBP8.2□□□□□ -1.1
UBFD1P1-201ENST00000473259 POTEBQ6S5H4 581 aa8.2□□□□□ -1.1
UBFD1P1-201ENST00000473259 PIGBQ92521 554 aa8.2□□□□□ -1.1
UBFD1P1-201ENST00000473259 SLC4A9Q96Q91 983 aa8.2□□□□□ -1.1
UBFD1P1-201ENST00000473259 EYA1Q99502 592 aa8.2□□□□□ -1.1
UBFD1P1-201ENST00000473259 MYH14Q7Z406 1995 aaKnown RBP8.2□□□□□ -1.1
UBFD1P1-201ENST00000473259 MAP3K5Q99683 1374 aa8.2□□□□□ -1.1
UBFD1P1-201ENST00000473259 VIRMAQ69YN4 1812 aaKnown RBP8.19□□□□□ -1.1
UBFD1P1-201ENST00000473259 ZNF316A6NFI3 1004 aaPredicted RBP8.19□□□□□ -1.1
UBFD1P1-201ENST00000473259 SLC27A3Q5K4L6 730 aa8.19□□□□□ -1.1
UBFD1P1-201ENST00000473259 POLKQ9UBT6 870 aa8.19□□□□□ -1.1
UBFD1P1-201ENST00000473259 ASAP1Q9ULH1 1129 aa8.19□□□□□ -1.1
UBFD1P1-201ENST00000473259 C4AP0C0L4 1744 aa8.18□□□□□ -1.1
UBFD1P1-201ENST00000473259 COL5A3P25940 1745 aaPredicted RBP8.18□□□□□ -1.1
UBFD1P1-201ENST00000473259 HSPA5P11021 654 aaKnown RBP8.18□□□□□ -1.1
UBFD1P1-201ENST00000473259 EIF4A2Q14240 407 aaKnown RBP8.18□□□□□ -1.1
UBFD1P1-201ENST00000473259 MFSD10Q14728 455 aa8.18□□□□□ -1.1
UBFD1P1-201ENST00000473259 AEBP1Q8IUX7 1158 aa8.18□□□□□ -1.1
UBFD1P1-201ENST00000473259 RAPGEF4Q8WZA2 1011 aa8.18□□□□□ -1.1
UBFD1P1-201ENST00000473259 TJP1Q07157 1748 aa8.17□□□□□ -1.1
UBFD1P1-201ENST00000473259 PLSCR2Q9NRY7 297 aa8.17□□□□□ -1.1
UBFD1P1-201ENST00000473259 PCDH11XQ9BZA7 1347 aa8.17□□□□□ -1.1
UBFD1P1-201ENST00000473259 PCDH11YQ9BZA8 1340 aa8.17□□□□□ -1.1
UBFD1P1-201ENST00000473259 KDM6AO15550 1401 aaPredicted RBP8.17□□□□□ -1.1
UBFD1P1-201ENST00000473259 SMG6Q86US8 1419 aaKnown RBP8.17□□□□□ -1.1
UBFD1P1-201ENST00000473259 POLD1P28340 1107 aa8.16□□□□□ -1.1
UBFD1P1-201ENST00000473259 OXER1Q8TDS5 423 aa8.16□□□□□ -1.1
UBFD1P1-201ENST00000473259 ATG3Q9NT62 314 aa8.16□□□□□ -1.1
UBFD1P1-201ENST00000473259 KDRP35968 1356 aa8.15□□□□□ -1.1
UBFD1P1-201ENST00000473259 WASHC2AQ641Q2 1341 aa8.15□□□□□ -1.1
UBFD1P1-201ENST00000473259 SENP3-EIF4A1A0A087X0R7 540 aa8.15□□□□□ -1.1
UBFD1P1-201ENST00000473259 PHKG2P15735 406 aa8.15□□□□□ -1.1
UBFD1P1-201ENST00000473259 C1QTNF8P60827 252 aa8.15□□□□□ -1.1
UBFD1P1-201ENST00000473259 TMEM132AQ24JP5 1023 aa8.15□□□□□ -1.1
UBFD1P1-201ENST00000473259 ZNF687Q8N1G0 1237 aa8.15□□□□□ -1.1
UBFD1P1-201ENST00000473259 ZNF526Q8TF50 670 aaPredicted RBP8.15□□□□□ -1.1
UBFD1P1-201ENST00000473259 SLC16A10Q8TF71 515 aa8.15□□□□□ -1.1
UBFD1P1-201ENST00000473259 LHX6Q9UPM6 363 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms