RNA–Protein interactions for RNA: ENST00000473221.5

APTX-217, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 687 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-217ENST00000473221 LAMB4A4D0S4 1761 aa12.81□□□□□ -0.36
APTX-217ENST00000473221 N4BP2Q86UW6 1770 aaPredicted RBP12.81□□□□□ -0.36
APTX-217ENST00000473221 LRP5O75197 1615 aa12.8□□□□□ -0.36
APTX-217ENST00000473221 SNRPA1P09661 255 aaKnown RBP12.8□□□□□ -0.36
APTX-217ENST00000473221 FLIIQ13045 1269 aa12.8□□□□□ -0.36
APTX-217ENST00000473221 C5P01031 1676 aa12.8□□□□□ -0.36
APTX-217ENST00000473221 ZBTB7BO15156 539 aaPredicted RBP12.79□□□□□ -0.36
APTX-217ENST00000473221 EIF2S2P20042 333 aaKnown RBP12.79□□□□□ -0.36
APTX-217ENST00000473221 CCT4P50991 539 aaKnown RBP12.79□□□□□ -0.36
APTX-217ENST00000473221 SLC39A6Q13433 755 aa12.79□□□□□ -0.36
APTX-217ENST00000473221 G2E3Q7L622 706 aa12.79□□□□□ -0.36
APTX-217ENST00000473221 ZNF496Q96IT1 587 aaPredicted RBP12.79□□□□□ -0.36
APTX-217ENST00000473221 ZBTB40Q9NUA8 1239 aa12.79□□□□□ -0.36
APTX-217ENST00000473221 CCDC9Q9Y3X0 531 aaKnown RBP12.79□□□□□ -0.36
APTX-217ENST00000473221 KDM2BQ8NHM5 1336 aa12.79□□□□□ -0.36
APTX-217ENST00000473221 PXDNLA1KZ92 1463 aa12.78□□□□□ -0.36
APTX-217ENST00000473221 DDX21Q9NR30 783 aaKnown RBP eCLIP12.78□□□□□ -0.36
APTX-217ENST00000473221 HYPKQ9NX55 129 aa12.78□□□□□ -0.36
APTX-217ENST00000473221 TMOD3Q9NYL9 352 aa12.78□□□□□ -0.36
APTX-217ENST00000473221 ERBB4Q15303 1308 aa12.78□□□□□ -0.36
APTX-217ENST00000473221 ONECUT3O60422 494 aaPredicted RBP12.77□□□□□ -0.37
APTX-217ENST00000473221 FKBP5Q13451 457 aaPredicted RBP12.77□□□□□ -0.37
APTX-217ENST00000473221 DEFB132Q7Z7B7 95 aa12.77□□□□□ -0.37
APTX-217ENST00000473221 RWDD1Q9H446 243 aaPredicted RBP12.77□□□□□ -0.37
APTX-217ENST00000473221 CHPF2Q9P2E5 772 aa12.77□□□□□ -0.37
APTX-217ENST00000473221 KCPQ6ZWJ8 1503 aa12.77□□□□□ -0.37
APTX-217ENST00000473221 GLI3P10071 1580 aa12.77□□□□□ -0.37
APTX-217ENST00000473221 VSIG10Q8N0Z9 540 aa12.76□□□□□ -0.37
APTX-217ENST00000473221 NECTIN2Q92692 538 aa12.76□□□□□ -0.37
APTX-217ENST00000473221 TEX13AQ9BXU3 409 aaPredicted RBP12.76□□□□□ -0.37
APTX-217ENST00000473221 PCDHB15Q9Y5E8 787 aa12.76□□□□□ -0.37
APTX-217ENST00000473221 BCL9O00512 1426 aa12.76□□□□□ -0.37
APTX-217ENST00000473221 DOT1LQ8TEK3 1739 aa12.76□□□□□ -0.37
APTX-217ENST00000473221 HDAC1Q13547 482 aaPredicted RBP12.75□□□□□ -0.37
APTX-217ENST00000473221 THSD7AQ9UPZ6 1657 aa12.74□□□□□ -0.37
APTX-217ENST00000473221 DDX58O95786 925 aaKnown RBP12.74□□□□□ -0.37
APTX-217ENST00000473221 PDIA6Q15084 440 aa12.74□□□□□ -0.37
APTX-217ENST00000473221 PIGBQ92521 554 aa12.74□□□□□ -0.37
APTX-217ENST00000473221 PHAXQ9H814 394 aaKnown RBP12.74□□□□□ -0.37
APTX-217ENST00000473221 ATP10DQ9P241 1426 aa12.73□□□□□ -0.37
APTX-217ENST00000473221 PRAMEF22A3QJZ6 481 aa12.73□□□□□ -0.37
APTX-217ENST00000473221 FAM98CQ17RN3 349 aaKnown RBP12.73□□□□□ -0.37
APTX-217ENST00000473221 MARCH10Q8NA82 808 aaPredicted RBP12.73□□□□□ -0.37
APTX-217ENST00000473221 USP16Q9Y5T5 823 aa12.73□□□□□ -0.37
APTX-217ENST00000473221 IBTKQ9P2D0 1353 aaPredicted RBP12.72□□□□□ -0.37
APTX-217ENST00000473221 F6X3S4 739 aa12.72□□□□□ -0.37
APTX-217ENST00000473221 IGHDP01880 384 aa12.72□□□□□ -0.37
APTX-217ENST00000473221 SF3B2Q13435 895 aaKnown RBP12.72□□□□□ -0.37
APTX-217ENST00000473221 KSR2Q6VAB6 950 aa12.72□□□□□ -0.37
APTX-217ENST00000473221 DNAAF4Q8WXU2 420 aa12.72□□□□□ -0.37
APTX-217ENST00000473221 ATG3Q9NT62 314 aa12.72□□□□□ -0.37
APTX-217ENST00000473221 KAT6BQ8WYB5 2073 aa12.71□□□□□ -0.37
APTX-217ENST00000473221 GNAI3P08754 354 aa12.71□□□□□ -0.37
APTX-217ENST00000473221 PRIM1P49642 420 aaKnown RBP12.71□□□□□ -0.37
APTX-217ENST00000473221 SLC4A10Q6U841 1118 aa12.71□□□□□ -0.37
APTX-217ENST00000473221 RPAP2Q8IXW5 612 aaPredicted RBP12.71□□□□□ -0.37
APTX-217ENST00000473221 PI4KAP2A4QPH2 592 aa12.7□□□□□ -0.38
APTX-217ENST00000473221 PROSER3Q2NL68 480 aa12.7□□□□□ -0.38
APTX-217ENST00000473221 PI4KAP1Q8N8J0 262 aa12.7□□□□□ -0.38
APTX-217ENST00000473221 SRCIN1Q9C0H9 1055 aa12.7□□□□□ -0.38
APTX-217ENST00000473221 ASAP1Q9ULH1 1129 aa12.7□□□□□ -0.38
APTX-217ENST00000473221 CICQ96RK0 1608 aaPredicted RBP12.7□□□□□ -0.38
APTX-217ENST00000473221 ADCY9O60503 1353 aa12.69□□□□□ -0.38
APTX-217ENST00000473221 PTCD1O75127 700 aaKnown RBP12.69□□□□□ -0.38
APTX-217ENST00000473221 ALDH1L1O75891 902 aa12.69□□□□□ -0.38
APTX-217ENST00000473221 ANXA1P04083 346 aa12.69□□□□□ -0.38
APTX-217ENST00000473221 BEND3Q5T5X7 828 aa12.69□□□□□ -0.38
APTX-217ENST00000473221 LRP10Q7Z4F1 713 aa12.69□□□□□ -0.38
APTX-217ENST00000473221 SEPT12Q8IYM1 358 aa12.69□□□□□ -0.38
APTX-217ENST00000473221 HDAC5Q9UQL6 1122 aa12.69□□□□□ -0.38
APTX-217ENST00000473221 ZNF831Q5JPB2 1677 aa12.69□□□□□ -0.38
APTX-217ENST00000473221 STARD3NLO95772 234 aa12.68□□□□□ -0.38
APTX-217ENST00000473221 SMC5Q8IY18 1101 aa12.68□□□□□ -0.38
APTX-217ENST00000473221 SMARCC1Q92922 1105 aaPredicted RBP12.68□□□□□ -0.38
APTX-217ENST00000473221 SYTL4Q96C24 671 aaPredicted RBP12.68□□□□□ -0.38
APTX-217ENST00000473221 MEIS3Q99687 375 aa12.68□□□□□ -0.38
APTX-217ENST00000473221 GNAI2P04899 355 aa12.67□□□□□ -0.38
APTX-217ENST00000473221 MYL6BP14649 208 aa12.67□□□□□ -0.38
APTX-217ENST00000473221 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
APTX-217ENST00000473221 COPS6Q7L5N1 327 aa12.67□□□□□ -0.38
APTX-217ENST00000473221 RIC3Q7Z5B4 369 aa12.67□□□□□ -0.38
APTX-217ENST00000473221 ANKRD44Q8N8A2 993 aa12.67□□□□□ -0.38
APTX-217ENST00000473221 LINS1Q8NG48 757 aa12.67□□□□□ -0.38
APTX-217ENST00000473221 XAGE3Q8WTP9 111 aa12.67□□□□□ -0.38
APTX-217ENST00000473221 GCC1Q96CN9 775 aa12.67□□□□□ -0.38
APTX-217ENST00000473221 MAP3K2Q9Y2U5 619 aa12.67□□□□□ -0.38
APTX-217ENST00000473221 TJP1Q07157 1748 aa12.67□□□□□ -0.38
APTX-217ENST00000473221 PSDA5PKW4 1024 aaPredicted RBP12.66□□□□□ -0.38
APTX-217ENST00000473221 NBPF26B4DH59 902 aa12.66□□□□□ -0.38
APTX-217ENST00000473221 BAG6P46379 1132 aa12.66□□□□□ -0.38
APTX-217ENST00000473221 NEXNQ0ZGT2 675 aa12.66□□□□□ -0.38
APTX-217ENST00000473221 NBPF14Q5TI25 921 aa12.66□□□□□ -0.38
APTX-217ENST00000473221 NBPF10Q6P3W6 841 aaKnown RBP12.66□□□□□ -0.38
APTX-217ENST00000473221 KRT27Q7Z3Y8 459 aa12.66□□□□□ -0.38
APTX-217ENST00000473221 NBPF15Q8N660 670 aa12.66□□□□□ -0.38
APTX-217ENST00000473221 PLBD2Q8NHP8 589 aa12.66□□□□□ -0.38
APTX-217ENST00000473221 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
APTX-217ENST00000473221 USP44Q9H0E7 712 aa12.66□□□□□ -0.38
APTX-217ENST00000473221 NHSQ6T4R5 1651 aa12.66□□□□□ -0.38
APTX-217ENST00000473221 ARFGEF2Q9Y6D5 1785 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms