RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-208ENST00000472844 P4HBP07237 508 aaKnown RBP8.46□□□□□ -1.06
NUP35-208ENST00000472844 COL6A1P12109 1028 aa8.46□□□□□ -1.06
NUP35-208ENST00000472844 RUNDC1Q96C34 613 aa8.46□□□□□ -1.06
NUP35-208ENST00000472844 YTHDC1Q96MU7 727 aaKnown RBP8.46□□□□□ -1.06
NUP35-208ENST00000472844 RSPH9Q9H1X1 276 aaPredicted RBP8.46□□□□□ -1.06
NUP35-208ENST00000472844 ANO2Q9NQ90 1003 aa8.46□□□□□ -1.06
NUP35-208ENST00000472844 AVENQ9NQS1 362 aaPredicted RBP8.46□□□□□ -1.06
NUP35-208ENST00000472844 USP17L3A6NCW0 530 aa8.45□□□□□ -1.06
NUP35-208ENST00000472844 USP17L4A6NCW7 530 aa8.45□□□□□ -1.06
NUP35-208ENST00000472844 TCERG1O14776 1098 aaKnown RBP8.45□□□□□ -1.06
NUP35-208ENST00000472844 NPHP1O15259 732 aa8.45□□□□□ -1.06
NUP35-208ENST00000472844 DHX16O60231 1041 aaKnown RBP8.45□□□□□ -1.06
NUP35-208ENST00000472844 KRT18P05783 430 aaKnown RBP8.45□□□□□ -1.06
NUP35-208ENST00000472844 PRIM1P49642 420 aaKnown RBP8.45□□□□□ -1.06
NUP35-208ENST00000472844 NBPF1Q3BBV0 1214 aa8.45□□□□□ -1.06
NUP35-208ENST00000472844 LARP1Q6PKG0 1096 aaKnown RBP8.45□□□□□ -1.06
NUP35-208ENST00000472844 USP17L2Q6R6M4 530 aa8.45□□□□□ -1.06
NUP35-208ENST00000472844 ARMCX6Q7L4S7 300 aa8.45□□□□□ -1.06
NUP35-208ENST00000472844 USP17L1Q7RTZ2 530 aa8.45□□□□□ -1.06
NUP35-208ENST00000472844 NLRP7Q8WX94 980 aa8.45□□□□□ -1.06
NUP35-208ENST00000472844 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.45□□□□□ -1.06
NUP35-208ENST00000472844 ERBB3P21860 1342 aa8.45□□□□□ -1.06
NUP35-208ENST00000472844 CFTRP13569 1480 aa8.45□□□□□ -1.06
NUP35-208ENST00000472844 C21orf2O43822 256 aa8.44□□□□□ -1.06
NUP35-208ENST00000472844 SORBS3O60504 671 aa8.44□□□□□ -1.06
NUP35-208ENST00000472844 RASSF7Q02833 373 aa8.44□□□□□ -1.06
NUP35-208ENST00000472844 PPP2R5AQ15172 486 aa8.44□□□□□ -1.06
NUP35-208ENST00000472844 PPP4R4Q6NUP7 873 aa8.44□□□□□ -1.06
NUP35-208ENST00000472844 MCF2L2Q86YR7 1114 aa8.44□□□□□ -1.06
NUP35-208ENST00000472844 CKAP2LQ8IYA6 745 aa8.44□□□□□ -1.06
NUP35-208ENST00000472844 RNPC3Q96LT9 517 aaKnown RBP8.44□□□□□ -1.06
NUP35-208ENST00000472844 CDC5LQ99459 802 aaKnown RBP8.44□□□□□ -1.06
NUP35-208ENST00000472844 HMX1Q9NP08 348 aaPredicted RBP8.44□□□□□ -1.06
NUP35-208ENST00000472844 VTI1BQ9UEU0 232 aa8.44□□□□□ -1.06
NUP35-208ENST00000472844 NOS2P35228 1153 aa8.43□□□□□ -1.06
NUP35-208ENST00000472844 DEKP35659 375 aaKnown RBP8.43□□□□□ -1.06
NUP35-208ENST00000472844 EIF4G2P78344 907 aaKnown RBP eCLIP8.43□□□□□ -1.06
NUP35-208ENST00000472844 SWI5Q1ZZU3 235 aa8.43□□□□□ -1.06
NUP35-208ENST00000472844 CRTC2Q53ET0 693 aaPredicted RBP8.43□□□□□ -1.06
NUP35-208ENST00000472844 SYCP2LQ5T4T6 812 aa8.43□□□□□ -1.06
NUP35-208ENST00000472844 MKL1Q969V6 931 aa8.43□□□□□ -1.06
NUP35-208ENST00000472844 FAM161BQ96MY7 647 aa8.43□□□□□ -1.06
NUP35-208ENST00000472844 ARPC5LQ9BPX5 153 aa8.43□□□□□ -1.06
NUP35-208ENST00000472844 HOMER2Q9NSB8 354 aa8.43□□□□□ -1.06
NUP35-208ENST00000472844 PARP2Q9UGN5 583 aa8.43□□□□□ -1.06
NUP35-208ENST00000472844 MKRN1Q9UHC7 482 aaKnown RBP8.43□□□□□ -1.06
NUP35-208ENST00000472844 THRAP3Q9Y2W1 955 aaKnown RBP8.43□□□□□ -1.06
NUP35-208ENST00000472844 PRDM2Q13029 1718 aa8.43□□□□□ -1.06
NUP35-208ENST00000472844 GOLGA6CA6NDK9 693 aa8.42□□□□□ -1.06
NUP35-208ENST00000472844 GOLGA6BA6NDN3 693 aa8.42□□□□□ -1.06
NUP35-208ENST00000472844 OATP04181 439 aa8.42□□□□□ -1.06
NUP35-208ENST00000472844 GOLGA6DP0CG33 693 aa8.42□□□□□ -1.06
NUP35-208ENST00000472844 RAPGEF1Q13905 1077 aa8.42□□□□□ -1.06
NUP35-208ENST00000472844 SLFNL1Q499Z3 407 aa8.42□□□□□ -1.06
NUP35-208ENST00000472844 NBPF6Q5VWK0 638 aa8.42□□□□□ -1.06
NUP35-208ENST00000472844 METTL3Q86U44 580 aaKnown RBP8.42□□□□□ -1.06
NUP35-208ENST00000472844 PNMA1Q8ND90 353 aa8.42□□□□□ -1.06
NUP35-208ENST00000472844 SVIPQ8NHG7 77 aa8.42□□□□□ -1.06
NUP35-208ENST00000472844 NBPF4Q96M43 638 aa8.42□□□□□ -1.06
NUP35-208ENST00000472844 NEUROD6Q96NK8 337 aa8.42□□□□□ -1.06
NUP35-208ENST00000472844 GOLGA6AQ9NYA3 693 aa8.42□□□□□ -1.06
NUP35-208ENST00000472844 PDZRN3Q9UPQ7 1066 aa8.42□□□□□ -1.06
NUP35-208ENST00000472844 MROH2BQ7Z745 1585 aa8.42□□□□□ -1.06
NUP35-208ENST00000472844 TARBP1Q13395 1621 aaKnown RBP8.42□□□□□ -1.06
NUP35-208ENST00000472844 TOPBP1Q92547 1522 aa8.41□□□□□ -1.06
NUP35-208ENST00000472844 BICDL2A1A5D9 508 aa8.41□□□□□ -1.06
NUP35-208ENST00000472844 TNFRSF10BO14763 440 aa8.41□□□□□ -1.06
NUP35-208ENST00000472844 LDHCP07864 332 aa8.41□□□□□ -1.06
NUP35-208ENST00000472844 NDUFV2P19404 249 aa8.41□□□□□ -1.06
NUP35-208ENST00000472844 GJA5P36382 358 aa8.41□□□□□ -1.06
NUP35-208ENST00000472844 KCTD2Q14681 263 aa8.41□□□□□ -1.06
NUP35-208ENST00000472844 SETDB1Q15047 1291 aa8.41□□□□□ -1.06
NUP35-208ENST00000472844 PUS10Q3MIT2 529 aaKnown RBP8.41□□□□□ -1.06
NUP35-208ENST00000472844 TMC4Q7Z404 712 aa8.41□□□□□ -1.06
NUP35-208ENST00000472844 RNF135Q8IUD6 432 aa8.41□□□□□ -1.06
NUP35-208ENST00000472844 PLEKHM2Q8IWE5 1019 aa8.41□□□□□ -1.06
NUP35-208ENST00000472844 ZNF654Q8IZM8 581 aa8.41□□□□□ -1.06
NUP35-208ENST00000472844 NFATC2IPQ8NCF5 419 aa8.41□□□□□ -1.06
NUP35-208ENST00000472844 ENOX1Q8TC92 643 aaKnown RBP8.41□□□□□ -1.06
NUP35-208ENST00000472844 TSR2Q969E8 191 aaKnown RBP8.41□□□□□ -1.06
NUP35-208ENST00000472844 SLC39A13Q96H72 371 aa8.41□□□□□ -1.06
NUP35-208ENST00000472844 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.41□□□□□ -1.06
NUP35-208ENST00000472844 SNAPC4Q5SXM2 1469 aa8.4□□□□□ -1.06
NUP35-208ENST00000472844 PRMT3O60678 531 aa8.4□□□□□ -1.06
NUP35-208ENST00000472844 NR1I2O75469 434 aa8.4□□□□□ -1.06
NUP35-208ENST00000472844 MYL1P05976 194 aa8.4□□□□□ -1.06
NUP35-208ENST00000472844 FGRP09769 529 aa8.4□□□□□ -1.06
NUP35-208ENST00000472844 PTK7Q13308 1070 aa8.4□□□□□ -1.06
NUP35-208ENST00000472844 NUTM1Q86Y26 1132 aa8.4□□□□□ -1.06
NUP35-208ENST00000472844 MARVELD3Q96A59 401 aa8.4□□□□□ -1.06
NUP35-208ENST00000472844 IFT122Q9HBG6 1241 aa8.4□□□□□ -1.06
NUP35-208ENST00000472844 KLF15Q9UIH9 416 aa8.4□□□□□ -1.06
NUP35-208ENST00000472844 LZTS1Q9Y250 596 aa8.4□□□□□ -1.06
NUP35-208ENST00000472844 DIP2BQ9P265 1576 aa8.39□□□□□ -1.07
NUP35-208ENST00000472844 ABCC10Q5T3U5 1492 aa8.39□□□□□ -1.07
NUP35-208ENST00000472844 MOXD2PA6NHM9 499 aa8.39□□□□□ -1.07
NUP35-208ENST00000472844 CDC45O75419 566 aa8.39□□□□□ -1.07
NUP35-208ENST00000472844 RASA1P20936 1047 aa8.39□□□□□ -1.07
NUP35-208ENST00000472844 FOXK1P85037 733 aa8.39□□□□□ -1.07
NUP35-208ENST00000472844 PSMD2Q13200 908 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms