RNA–Protein interactions for RNA: ENST00000472696.1

EPHA4-212, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-212ENST00000472696 ZNF496Q96IT1 587 aaPredicted RBP7.5□□□□□ -1.21
EPHA4-212ENST00000472696 MIS18AQ9NYP9 233 aa7.5□□□□□ -1.21
EPHA4-212ENST00000472696 KCPQ6ZWJ8 1503 aa7.5□□□□□ -1.21
EPHA4-212ENST00000472696 LAMB4A4D0S4 1761 aa7.5□□□□□ -1.21
EPHA4-212ENST00000472696 PTPRCP08575 1304 aa7.5□□□□□ -1.21
EPHA4-212ENST00000472696 RNF123Q5XPI4 1314 aa7.5□□□□□ -1.21
EPHA4-212ENST00000472696 PALLDQ8WX93 1383 aa7.49□□□□□ -1.21
EPHA4-212ENST00000472696 LOC102724428A0A0B4J2F2 783 aa7.49□□□□□ -1.21
EPHA4-212ENST00000472696 SIK1P57059 783 aa7.49□□□□□ -1.21
EPHA4-212ENST00000472696 SLC39A6Q13433 755 aa7.49□□□□□ -1.21
EPHA4-212ENST00000472696 RC3H1Q5TC82 1133 aaKnown RBP7.49□□□□□ -1.21
EPHA4-212ENST00000472696 HDGFL1Q5TGJ6 251 aa7.49□□□□□ -1.21
EPHA4-212ENST00000472696 PAXIP1Q6ZW49 1069 aaPredicted RBP7.49□□□□□ -1.21
EPHA4-212ENST00000472696 ACSBG1Q96GR2 724 aa7.49□□□□□ -1.21
EPHA4-212ENST00000472696 DDX21Q9NR30 783 aaKnown RBP eCLIP7.49□□□□□ -1.21
EPHA4-212ENST00000472696 HYPKQ9NX55 129 aa7.49□□□□□ -1.21
EPHA4-212ENST00000472696 ASAP1Q9ULH1 1129 aa7.49□□□□□ -1.21
EPHA4-212ENST00000472696 BTAF1O14981 1849 aa7.49□□□□□ -1.21
EPHA4-212ENST00000472696 LY75O60449 1722 aa7.49□□□□□ -1.21
EPHA4-212ENST00000472696 SENP3-EIF4A1A0A087X0R7 540 aa7.48□□□□□ -1.21
EPHA4-212ENST00000472696 KCNQ2O43526 872 aa7.48□□□□□ -1.21
EPHA4-212ENST00000472696 SF3B2Q13435 895 aaKnown RBP7.48□□□□□ -1.21
EPHA4-212ENST00000472696 AAMPQ13685 434 aa7.48□□□□□ -1.21
EPHA4-212ENST00000472696 PDE3AQ14432 1141 aa7.48□□□□□ -1.21
EPHA4-212ENST00000472696 TSPYL6Q8N831 410 aa7.48□□□□□ -1.21
EPHA4-212ENST00000472696 CHMP4BQ9H444 224 aaKnown RBP7.48□□□□□ -1.21
EPHA4-212ENST00000472696 IBTKQ9P2D0 1353 aaPredicted RBP7.47□□□□□ -1.21
EPHA4-212ENST00000472696 KCNQ3O43525 872 aa7.47□□□□□ -1.21
EPHA4-212ENST00000472696 PTCD1O75127 700 aaKnown RBP7.47□□□□□ -1.21
EPHA4-212ENST00000472696 DDX58O95786 925 aaKnown RBP7.47□□□□□ -1.21
EPHA4-212ENST00000472696 ATP6V1AP38606 617 aa7.47□□□□□ -1.21
EPHA4-212ENST00000472696 IL6STP40189 918 aaPredicted RBP7.47□□□□□ -1.21
EPHA4-212ENST00000472696 ERICH6BQ5W0A0 696 aa7.47□□□□□ -1.21
EPHA4-212ENST00000472696 ZKSCAN2Q63HK3 967 aa7.47□□□□□ -1.21
EPHA4-212ENST00000472696 MRPL50Q8N5N7 158 aaKnown RBP7.47□□□□□ -1.21
EPHA4-212ENST00000472696 SSH1Q8WYL5 1049 aa7.47□□□□□ -1.21
EPHA4-212ENST00000472696 RBM42Q9BTD8 480 aaKnown RBP7.47□□□□□ -1.21
EPHA4-212ENST00000472696 API5Q9BZZ5 524 aaKnown RBP7.47□□□□□ -1.21
EPHA4-212ENST00000472696 SMC4Q9NTJ3 1288 aa7.47□□□□□ -1.21
EPHA4-212ENST00000472696 C5P01031 1676 aa7.47□□□□□ -1.21
EPHA4-212ENST00000472696 CNTNAP4Q9C0A0 1308 aa7.47□□□□□ -1.21
EPHA4-212ENST00000472696 ELL2O00472 640 aaPredicted RBP7.46□□□□□ -1.22
EPHA4-212ENST00000472696 TRIM37O94972 964 aa7.46□□□□□ -1.22
EPHA4-212ENST00000472696 SLC4A2P04920 1241 aa7.46□□□□□ -1.22
EPHA4-212ENST00000472696 CYP19A1P11511 503 aaPredicted RBP7.46□□□□□ -1.22
EPHA4-212ENST00000472696 BAG6P46379 1132 aa7.46□□□□□ -1.22
EPHA4-212ENST00000472696 USP16Q9Y5T5 823 aa7.46□□□□□ -1.22
EPHA4-212ENST00000472696 COL5A3P25940 1745 aaPredicted RBP7.46□□□□□ -1.22
EPHA4-212ENST00000472696 RREB1Q92766 1687 aa7.45□□□□□ -1.22
EPHA4-212ENST00000472696 A0A087WZG4 1122 aa7.45□□□□□ -1.22
EPHA4-212ENST00000472696 APBA3O96018 575 aa7.45□□□□□ -1.22
EPHA4-212ENST00000472696 EIF2S2P20042 333 aaKnown RBP7.45□□□□□ -1.22
EPHA4-212ENST00000472696 RRP1P56182 461 aaKnown RBP7.45□□□□□ -1.22
EPHA4-212ENST00000472696 KRT24Q2M2I5 525 aa7.45□□□□□ -1.22
EPHA4-212ENST00000472696 ATF7IPQ6VMQ6 1270 aa7.45□□□□□ -1.22
EPHA4-212ENST00000472696 FLAD1Q8NFF5 587 aa7.45□□□□□ -1.22
EPHA4-212ENST00000472696 CCNL1Q9UK58 526 aaPredicted RBP7.45□□□□□ -1.22
EPHA4-212ENST00000472696 TJP1Q07157 1748 aa7.44□□□□□ -1.22
EPHA4-212ENST00000472696 TNS1Q9HBL0 1735 aaKnown RBP7.44□□□□□ -1.22
EPHA4-212ENST00000472696 PXDNLA1KZ92 1463 aa7.44□□□□□ -1.22
EPHA4-212ENST00000472696 TAF1LQ8IZX4 1826 aa7.44□□□□□ -1.22
EPHA4-212ENST00000472696 ERVV-1B6SEH8 477 aa7.44□□□□□ -1.22
EPHA4-212ENST00000472696 RPS6KA4O75676 772 aa7.44□□□□□ -1.22
EPHA4-212ENST00000472696 CANXP27824 592 aaKnown RBP7.44□□□□□ -1.22
EPHA4-212ENST00000472696 EIF5P55010 431 aaKnown RBP7.44□□□□□ -1.22
EPHA4-212ENST00000472696 FLIIQ13045 1269 aa7.44□□□□□ -1.22
EPHA4-212ENST00000472696 PDIA6Q15084 440 aa7.44□□□□□ -1.22
EPHA4-212ENST00000472696 TXNRD1Q16881 649 aa7.44□□□□□ -1.22
EPHA4-212ENST00000472696 HSP90AB3PQ58FF7 597 aa7.44□□□□□ -1.22
EPHA4-212ENST00000472696 FAM182BQ5T319 152 aa7.44□□□□□ -1.22
EPHA4-212ENST00000472696 DNAJC10Q8IXB1 793 aa7.44□□□□□ -1.22
EPHA4-212ENST00000472696 BBXQ8WY36 941 aaPredicted RBP7.44□□□□□ -1.22
EPHA4-212ENST00000472696 SLC4A9Q96Q91 983 aa7.44□□□□□ -1.22
EPHA4-212ENST00000472696 CCDC87Q9NVE4 849 aa7.44□□□□□ -1.22
EPHA4-212ENST00000472696 CHPF2Q9P2E5 772 aa7.44□□□□□ -1.22
EPHA4-212ENST00000472696 NOB1Q9ULX3 412 aaKnown RBP7.44□□□□□ -1.22
EPHA4-212ENST00000472696 HDAC5Q9UQL6 1122 aa7.44□□□□□ -1.22
EPHA4-212ENST00000472696 SUPT16HQ9Y5B9 1047 aaKnown RBP7.44□□□□□ -1.22
EPHA4-212ENST00000472696 BCAR3O75815 825 aa7.43□□□□□ -1.22
EPHA4-212ENST00000472696 NEFLP07196 543 aa7.43□□□□□ -1.22
EPHA4-212ENST00000472696 SSFA2P28290 1259 aa7.43□□□□□ -1.22
EPHA4-212ENST00000472696 CCT4P50991 539 aaKnown RBP7.43□□□□□ -1.22
EPHA4-212ENST00000472696 FKBP5Q13451 457 aaPredicted RBP7.43□□□□□ -1.22
EPHA4-212ENST00000472696 CLEC4GQ6UXB4 293 aa7.43□□□□□ -1.22
EPHA4-212ENST00000472696 KSR2Q6VAB6 950 aa7.43□□□□□ -1.22
EPHA4-212ENST00000472696 ANKRD13DQ6ZTN6 518 aa7.43□□□□□ -1.22
EPHA4-212ENST00000472696 LRP10Q7Z4F1 713 aa7.43□□□□□ -1.22
EPHA4-212ENST00000472696 FTSJ3Q8IY81 847 aaKnown RBP7.43□□□□□ -1.22
EPHA4-212ENST00000472696 DZIP1LQ8IYY4 767 aaKnown RBP7.43□□□□□ -1.22
EPHA4-212ENST00000472696 RTCBQ9Y3I0 505 aaKnown RBP7.43□□□□□ -1.22
EPHA4-212ENST00000472696 ATP10DQ9P241 1426 aa7.43□□□□□ -1.22
EPHA4-212ENST00000472696 CRKLP46109 303 aaKnown RBP7.42□□□□□ -1.22
EPHA4-212ENST00000472696 NEXNQ0ZGT2 675 aa7.42□□□□□ -1.22
EPHA4-212ENST00000472696 ITPK1Q13572 414 aa7.42□□□□□ -1.22
EPHA4-212ENST00000472696 INTS3Q68E01 1043 aaKnown RBP7.42□□□□□ -1.22
EPHA4-212ENST00000472696 INTS5Q6P9B9 1019 aaKnown RBP7.42□□□□□ -1.22
EPHA4-212ENST00000472696 KIF6Q6ZMV9 814 aa7.42□□□□□ -1.22
EPHA4-212ENST00000472696 PLBD2Q8NHP8 589 aa7.42□□□□□ -1.22
EPHA4-212ENST00000472696 FRAT1Q92837 279 aaPredicted RBP7.42□□□□□ -1.22
EPHA4-212ENST00000472696 CAMKK2Q96RR4 588 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms