RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 NLRP2Q9NX02 1062 aa16.26■□□□□ 0.19
SCAMP4-207ENST00000472442 MSNP26038 577 aaKnown RBP16.25■□□□□ 0.19
SCAMP4-207ENST00000472442 CCT4P50991 539 aaKnown RBP16.25■□□□□ 0.19
SCAMP4-207ENST00000472442 OFD1O75665 1012 aa16.25■□□□□ 0.19
SCAMP4-207ENST00000472442 RPAP2Q8IXW5 612 aaPredicted RBP16.25■□□□□ 0.19
SCAMP4-207ENST00000472442 SLAIN2Q9P270 581 aa16.25■□□□□ 0.19
SCAMP4-207ENST00000472442 CACNA1FO60840 1977 aa16.25■□□□□ 0.19
SCAMP4-207ENST00000472442 PHAXQ9H814 394 aaKnown RBP16.24■□□□□ 0.19
SCAMP4-207ENST00000472442 OVOS2A0A0G2JMS6 1433 aa16.24■□□□□ 0.19
SCAMP4-207ENST00000472442 KLHL40Q2TBA0 621 aa16.24■□□□□ 0.19
SCAMP4-207ENST00000472442 ADAMTS7Q9UKP4 1686 aa16.23■□□□□ 0.19
SCAMP4-207ENST00000472442 BAG4O95429 457 aaKnown RBP16.23■□□□□ 0.19
SCAMP4-207ENST00000472442 EIF2S2P20042 333 aaKnown RBP16.23■□□□□ 0.19
SCAMP4-207ENST00000472442 CPDO75976 1380 aa16.23■□□□□ 0.19
SCAMP4-207ENST00000472442 MEGF6O75095 1541 aa16.23■□□□□ 0.19
SCAMP4-207ENST00000472442 HOXB7P09629 217 aa16.23■□□□□ 0.19
SCAMP4-207ENST00000472442 RBM10P98175 930 aaKnown RBP16.23■□□□□ 0.19
SCAMP4-207ENST00000472442 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.23■□□□□ 0.19
SCAMP4-207ENST00000472442 TBC1D9Q6ZT07 1266 aa16.23■□□□□ 0.19
SCAMP4-207ENST00000472442 SOS2Q07890 1332 aaPredicted RBP16.22■□□□□ 0.19
SCAMP4-207ENST00000472442 RAPGEF4Q8WZA2 1011 aa16.22■□□□□ 0.19
SCAMP4-207ENST00000472442 IBTKQ9P2D0 1353 aaPredicted RBP16.22■□□□□ 0.19
SCAMP4-207ENST00000472442 SIPA1L3O60292 1781 aaPredicted RBP16.22■□□□□ 0.19
SCAMP4-207ENST00000472442 CHPF2Q9P2E5 772 aa16.21■□□□□ 0.19
SCAMP4-207ENST00000472442 ABCC6O95255 1503 aa16.21■□□□□ 0.19
SCAMP4-207ENST00000472442 HEG1Q9ULI3 1381 aa16.21■□□□□ 0.19
SCAMP4-207ENST00000472442 CSB-PGBD3P0DP91 1061 aa16.21■□□□□ 0.19
SCAMP4-207ENST00000472442 KDM6AO15550 1401 aaPredicted RBP16.2■□□□□ 0.18
SCAMP4-207ENST00000472442 CLEC17AQ6ZS10 378 aa16.2■□□□□ 0.18
SCAMP4-207ENST00000472442 PRAMEF22A3QJZ6 481 aa16.19■□□□□ 0.18
SCAMP4-207ENST00000472442 PHKG2P15735 406 aa16.19■□□□□ 0.18
SCAMP4-207ENST00000472442 TATP17735 454 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-207ENST00000472442 NCLP19338 710 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-207ENST00000472442 R3HCC1Q9Y3T6 440 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-207ENST00000472442 GIGYF1O75420 1035 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-207ENST00000472442 ANXA1P04083 346 aa16.19■□□□□ 0.18
SCAMP4-207ENST00000472442 MCTP1Q6DN14 999 aa16.19■□□□□ 0.18
SCAMP4-207ENST00000472442 CAVIN1Q6NZI2 390 aaKnown RBP16.19■□□□□ 0.18
SCAMP4-207ENST00000472442 N4BP2Q86UW6 1770 aaPredicted RBP16.19■□□□□ 0.18
SCAMP4-207ENST00000472442 PXDNLA1KZ92 1463 aa16.19■□□□□ 0.18
SCAMP4-207ENST00000472442 GNAI2P04899 355 aa16.18■□□□□ 0.18
SCAMP4-207ENST00000472442 C16orf71Q8IYS4 520 aaPredicted RBP16.18■□□□□ 0.18
SCAMP4-207ENST00000472442 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.18■□□□□ 0.18
SCAMP4-207ENST00000472442 ZNF445P59923 1031 aa16.17■□□□□ 0.18
SCAMP4-207ENST00000472442 USP44Q9H0E7 712 aa16.17■□□□□ 0.18
SCAMP4-207ENST00000472442 PLEKHM2Q8IWE5 1019 aa16.17■□□□□ 0.18
SCAMP4-207ENST00000472442 FAM13BQ9NYF5 915 aa16.17■□□□□ 0.18
SCAMP4-207ENST00000472442 SPG7Q9UQ90 795 aa16.17■□□□□ 0.18
SCAMP4-207ENST00000472442 ZSCAN23Q3MJ62 389 aa16.17■□□□□ 0.18
SCAMP4-207ENST00000472442 SCN11AQ9UI33 1791 aa16.17■□□□□ 0.18
SCAMP4-207ENST00000472442 CYP27B1O15528 508 aa16.16■□□□□ 0.18
SCAMP4-207ENST00000472442 GNAI3P08754 354 aa16.16■□□□□ 0.18
SCAMP4-207ENST00000472442 TERF1P54274 439 aa16.16■□□□□ 0.18
SCAMP4-207ENST00000472442 SLC52A2Q9HAB3 445 aa16.16■□□□□ 0.18
SCAMP4-207ENST00000472442 SMARCA5O60264 1052 aaPredicted RBP16.15■□□□□ 0.18
SCAMP4-207ENST00000472442 SLC39A6Q13433 755 aa16.15■□□□□ 0.18
SCAMP4-207ENST00000472442 PROSER3Q2NL68 480 aa16.15■□□□□ 0.18
SCAMP4-207ENST00000472442 OTUD7AQ8TE49 926 aaPredicted RBP16.15■□□□□ 0.18
SCAMP4-207ENST00000472442 RBSNQ9H1K0 784 aa16.15■□□□□ 0.18
SCAMP4-207ENST00000472442 PI4KAP2A4QPH2 592 aa16.15■□□□□ 0.18
SCAMP4-207ENST00000472442 IFNL2Q8IZJ0 200 aa16.15■□□□□ 0.18
SCAMP4-207ENST00000472442 PI4KAP1Q8N8J0 262 aa16.15■□□□□ 0.18
SCAMP4-207ENST00000472442 NFATC2IPQ8NCF5 419 aa16.15■□□□□ 0.18
SCAMP4-207ENST00000472442 PNMA6EA0A0J9YXQ4 647 aa16.14■□□□□ 0.17
SCAMP4-207ENST00000472442 GSPT1P15170 499 aaKnown RBP16.14■□□□□ 0.17
SCAMP4-207ENST00000472442 PRDM11Q9NQV5 511 aa16.14■□□□□ 0.17
SCAMP4-207ENST00000472442 NOL7Q9UMY1 257 aaKnown RBP16.14■□□□□ 0.17
SCAMP4-207ENST00000472442 AK9Q5TCS8 1911 aa16.14■□□□□ 0.17
SCAMP4-207ENST00000472442 APBB1O00213 710 aa16.14■□□□□ 0.17
SCAMP4-207ENST00000472442 CDC45O75419 566 aa16.14■□□□□ 0.17
SCAMP4-207ENST00000472442 ZNF790Q6PG37 636 aa16.14■□□□□ 0.17
SCAMP4-207ENST00000472442 DBF4Q9UBU7 674 aaPredicted RBP16.14■□□□□ 0.17
SCAMP4-207ENST00000472442 PKD1L3Q7Z443 1732 aa16.14■□□□□ 0.17
SCAMP4-207ENST00000472442 ADCY9O60503 1353 aa16.14■□□□□ 0.17
SCAMP4-207ENST00000472442 PKP1Q13835 747 aa16.14■□□□□ 0.17
SCAMP4-207ENST00000472442 HS1BP3Q53T59 392 aa16.14■□□□□ 0.17
SCAMP4-207ENST00000472442 CHMP4AQ9BY43 222 aa16.14■□□□□ 0.17
SCAMP4-207ENST00000472442 LMBRD1Q9NUN5 540 aa16.14■□□□□ 0.17
SCAMP4-207ENST00000472442 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.14■□□□□ 0.17
SCAMP4-207ENST00000472442 LRRFIP2Q9Y608 721 aaKnown RBP16.14■□□□□ 0.17
SCAMP4-207ENST00000472442 HMMRO75330 724 aa16.13■□□□□ 0.17
SCAMP4-207ENST00000472442 BEND3Q5T5X7 828 aa16.13■□□□□ 0.17
SCAMP4-207ENST00000472442 PLEKHG2Q9H7P9 1386 aa16.13■□□□□ 0.17
SCAMP4-207ENST00000472442 ATP8B2P98198 1209 aa16.13■□□□□ 0.17
SCAMP4-207ENST00000472442 DNAAF4Q8WXU2 420 aa16.13■□□□□ 0.17
SCAMP4-207ENST00000472442 WDR17Q8IZU2 1322 aa16.12■□□□□ 0.17
SCAMP4-207ENST00000472442 UQCRHLA0A096LP55 91 aa16.12■□□□□ 0.17
SCAMP4-207ENST00000472442 ZNF500O60304 480 aaPredicted RBP16.12■□□□□ 0.17
SCAMP4-207ENST00000472442 UQCRHP07919 91 aa16.12■□□□□ 0.17
SCAMP4-207ENST00000472442 PRIM1P49642 420 aaKnown RBP16.12■□□□□ 0.17
SCAMP4-207ENST00000472442 PDLIM2Q96JY6 352 aa16.12■□□□□ 0.17
SCAMP4-207ENST00000472442 SRCIN1Q9C0H9 1055 aa16.12■□□□□ 0.17
SCAMP4-207ENST00000472442 ABCA3Q99758 1704 aa16.12■□□□□ 0.17
SCAMP4-207ENST00000472442 COL5A2P05997 1499 aaPredicted RBP16.12■□□□□ 0.17
SCAMP4-207ENST00000472442 NUCB2P80303 420 aa16.12■□□□□ 0.17
SCAMP4-207ENST00000472442 DCAF5Q96JK2 942 aa16.11■□□□□ 0.17
SCAMP4-207ENST00000472442 RABEP1Q15276 862 aa16.11■□□□□ 0.17
SCAMP4-207ENST00000472442 RBM27Q9P2N5 1060 aaKnown RBP16.11■□□□□ 0.17
SCAMP4-207ENST00000472442 EXOC6BQ9Y2D4 811 aa16.11■□□□□ 0.17
SCAMP4-207ENST00000472442 NHSL1Q5SYE7 1610 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms