RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 NEFMP07197 916 aa15.77■□□□□ 0.12
CLRN1-205ENST00000472224 ATG3Q9NT62 314 aa15.77■□□□□ 0.12
CLRN1-205ENST00000472224 KCPQ6ZWJ8 1503 aa15.77■□□□□ 0.11
CLRN1-205ENST00000472224 LOC102724428A0A0B4J2F2 783 aa15.76■□□□□ 0.11
CLRN1-205ENST00000472224 GNAT3A8MTJ3 354 aa15.76■□□□□ 0.11
CLRN1-205ENST00000472224 DSG3P32926 999 aa15.76■□□□□ 0.11
CLRN1-205ENST00000472224 SIK1P57059 783 aa15.76■□□□□ 0.11
CLRN1-205ENST00000472224 NFATC2IPQ8NCF5 419 aa15.76■□□□□ 0.11
CLRN1-205ENST00000472224 RBM42Q9BTD8 480 aaKnown RBP15.76■□□□□ 0.11
CLRN1-205ENST00000472224 BCS1LQ9Y276 419 aa15.76■□□□□ 0.11
CLRN1-205ENST00000472224 SIPA1L3O60292 1781 aaPredicted RBP15.75■□□□□ 0.11
CLRN1-205ENST00000472224 MAPK8IP3Q9UPT6 1336 aa15.75■□□□□ 0.11
CLRN1-205ENST00000472224 SSFA2P28290 1259 aa15.75■□□□□ 0.11
CLRN1-205ENST00000472224 FSTL1Q12841 308 aa15.75■□□□□ 0.11
CLRN1-205ENST00000472224 WDR43Q15061 677 aaKnown RBP eCLIP15.75■□□□□ 0.11
CLRN1-205ENST00000472224 SLC52A2Q9HAB3 445 aa15.75■□□□□ 0.11
CLRN1-205ENST00000472224 C10orf71Q711Q0 1435 aa15.75■□□□□ 0.11
CLRN1-205ENST00000472224 A0A0G2JLW4 131 aa15.74■□□□□ 0.11
CLRN1-205ENST00000472224 ARHGAP27Q6ZUM4 889 aa15.74■□□□□ 0.11
CLRN1-205ENST00000472224 LINC00116Q8NCU8 138 aa15.74■□□□□ 0.11
CLRN1-205ENST00000472224 C4AP0C0L4 1744 aa15.74■□□□□ 0.11
CLRN1-205ENST00000472224 COL5A3P25940 1745 aaPredicted RBP15.74■□□□□ 0.11
CLRN1-205ENST00000472224 ABCB7O75027 752 aa15.73■□□□□ 0.11
CLRN1-205ENST00000472224 PTCD1O75127 700 aaKnown RBP15.73■□□□□ 0.11
CLRN1-205ENST00000472224 MMP10P09238 476 aa15.73■□□□□ 0.11
CLRN1-205ENST00000472224 ATP6V1AP38606 617 aa15.73■□□□□ 0.11
CLRN1-205ENST00000472224 TEFQ10587 303 aa15.73■□□□□ 0.11
CLRN1-205ENST00000472224 SBF1O95248 1867 aa15.73■□□□□ 0.11
CLRN1-205ENST00000472224 TJP1Q07157 1748 aa15.72■□□□□ 0.11
CLRN1-205ENST00000472224 ANP32CO43423 234 aa15.72■□□□□ 0.11
CLRN1-205ENST00000472224 SLC39A6Q13433 755 aa15.72■□□□□ 0.11
CLRN1-205ENST00000472224 C9orf131Q5VYM1 1079 aa15.72■□□□□ 0.11
CLRN1-205ENST00000472224 C16orf71Q8IYS4 520 aaPredicted RBP15.72■□□□□ 0.11
CLRN1-205ENST00000472224 RTF1Q92541 710 aaKnown RBP15.72■□□□□ 0.11
CLRN1-205ENST00000472224 ZNF831Q5JPB2 1677 aa15.72■□□□□ 0.11
CLRN1-205ENST00000472224 SLC34A2O95436 690 aa15.71■□□□□ 0.11
CLRN1-205ENST00000472224 HSPA1AP0DMV8 641 aaKnown RBP15.71■□□□□ 0.11
CLRN1-205ENST00000472224 HSPA1BP0DMV9 641 aaKnown RBP15.71■□□□□ 0.11
CLRN1-205ENST00000472224 HMGB2P26583 209 aaKnown RBP15.71■□□□□ 0.11
CLRN1-205ENST00000472224 TGFB2P61812 414 aa15.71■□□□□ 0.11
CLRN1-205ENST00000472224 ITPK1Q13572 414 aa15.71■□□□□ 0.11
CLRN1-205ENST00000472224 PNNQ9H307 717 aaKnown RBP15.71■□□□□ 0.11
CLRN1-205ENST00000472224 UBR2Q8IWV8 1755 aa15.71■□□□□ 0.11
CLRN1-205ENST00000472224 DPEP1P16444 411 aa15.7■□□□□ 0.1
CLRN1-205ENST00000472224 MCM10Q7L590 875 aa15.7■□□□□ 0.1
CLRN1-205ENST00000472224 CCDC146Q8IYE0 955 aa15.7■□□□□ 0.1
CLRN1-205ENST00000472224 IL17REQ8NFR9 667 aa15.7■□□□□ 0.1
CLRN1-205ENST00000472224 POLA2Q14181 598 aa15.69■□□□□ 0.1
CLRN1-205ENST00000472224 DCTN1Q14203 1278 aa15.69■□□□□ 0.1
CLRN1-205ENST00000472224 PLEKHF1Q96S99 279 aa15.69■□□□□ 0.1
CLRN1-205ENST00000472224 MYH14Q7Z406 1995 aaKnown RBP15.69■□□□□ 0.1
CLRN1-205ENST00000472224 GNPATO15228 680 aa15.68■□□□□ 0.1
CLRN1-205ENST00000472224 KCNA3P22001 575 aa15.68■□□□□ 0.1
CLRN1-205ENST00000472224 NFE2L2Q16236 605 aa15.68■□□□□ 0.1
CLRN1-205ENST00000472224 TTC5Q8N0Z6 440 aa15.68■□□□□ 0.1
CLRN1-205ENST00000472224 SLC4A9Q96Q91 983 aa15.68■□□□□ 0.1
CLRN1-205ENST00000472224 RRAGCQ9HB90 399 aa15.68■□□□□ 0.1
CLRN1-205ENST00000472224 CEMIPQ8WUJ3 1361 aa15.67■□□□□ 0.1
CLRN1-205ENST00000472224 KDM2BQ8NHM5 1336 aa15.67■□□□□ 0.1
CLRN1-205ENST00000472224 SMC1BQ8NDV3 1235 aa15.65■□□□□ 0.1
CLRN1-205ENST00000472224 ADAMTS8Q9UP79 889 aa15.65■□□□□ 0.1
CLRN1-205ENST00000472224 RRP7AQ9Y3A4 280 aaKnown RBP15.65■□□□□ 0.1
CLRN1-205ENST00000472224 BTBD11A6QL63 1104 aa15.64■□□□□ 0.09
CLRN1-205ENST00000472224 HTATSF1O43719 755 aaKnown RBP15.64■□□□□ 0.09
CLRN1-205ENST00000472224 NEUROD2Q15784 382 aa15.64■□□□□ 0.09
CLRN1-205ENST00000472224 CCDC184Q52MB2 194 aa15.64■□□□□ 0.09
CLRN1-205ENST00000472224 DNAJC10Q8IXB1 793 aa15.64■□□□□ 0.09
CLRN1-205ENST00000472224 THUMPD2Q9BTF0 503 aaKnown RBP15.64■□□□□ 0.09
CLRN1-205ENST00000472224 RNF181Q9P0P0 153 aa15.64■□□□□ 0.09
CLRN1-205ENST00000472224 RIPK4P57078 832 aa15.63■□□□□ 0.09
CLRN1-205ENST00000472224 ZNF790Q6PG37 636 aa15.63■□□□□ 0.09
CLRN1-205ENST00000472224 RUNDC1Q96C34 613 aa15.63■□□□□ 0.09
CLRN1-205ENST00000472224 MRS2Q9HD23 443 aa15.63■□□□□ 0.09
CLRN1-205ENST00000472224 CNTNAP4Q9C0A0 1308 aa15.63■□□□□ 0.09
CLRN1-205ENST00000472224 TIAM2Q8IVF5 1701 aa15.63■□□□□ 0.09
CLRN1-205ENST00000472224 KDM3BQ7LBC6 1761 aa15.62■□□□□ 0.09
CLRN1-205ENST00000472224 KCNQ3O43525 872 aa15.62■□□□□ 0.09
CLRN1-205ENST00000472224 TMPOP42166 694 aaKnown RBP15.62■□□□□ 0.09
CLRN1-205ENST00000472224 CRKLP46109 303 aaKnown RBP15.62■□□□□ 0.09
CLRN1-205ENST00000472224 ZNF496Q96IT1 587 aaPredicted RBP15.62■□□□□ 0.09
CLRN1-205ENST00000472224 CCDC87Q9NVE4 849 aa15.62■□□□□ 0.09
CLRN1-205ENST00000472224 RTCBQ9Y3I0 505 aaKnown RBP15.62■□□□□ 0.09
CLRN1-205ENST00000472224 GYS1P13807 737 aa15.61■□□□□ 0.09
CLRN1-205ENST00000472224 NLGN1Q8N2Q7 840 aa15.61■□□□□ 0.09
CLRN1-205ENST00000472224 HEG1Q9ULI3 1381 aa15.61■□□□□ 0.09
CLRN1-205ENST00000472224 LMOD3Q0VAK6 560 aa15.6■□□□□ 0.09
CLRN1-205ENST00000472224 FMNL2Q96PY5 1086 aa15.6■□□□□ 0.09
CLRN1-205ENST00000472224 TRAPPC3LQ5T215 181 aa15.59■□□□□ 0.09
CLRN1-205ENST00000472224 RC3H1Q5TC82 1133 aaKnown RBP15.59■□□□□ 0.09
CLRN1-205ENST00000472224 ARHGEF1Q92888 912 aaKnown RBP15.59■□□□□ 0.09
CLRN1-205ENST00000472224 MIS18AQ9NYP9 233 aa15.59■□□□□ 0.09
CLRN1-205ENST00000472224 PIM2Q9P1W9 311 aa15.59■□□□□ 0.09
CLRN1-205ENST00000472224 LAMB4A4D0S4 1761 aa15.59■□□□□ 0.09
CLRN1-205ENST00000472224 CCDC88AQ3V6T2 1871 aa15.59■□□□□ 0.09
CLRN1-205ENST00000472224 TAF7Q15545 349 aaPredicted RBP15.58■□□□□ 0.08
CLRN1-205ENST00000472224 VSIG10Q8N0Z9 540 aa15.58■□□□□ 0.08
CLRN1-205ENST00000472224 RPS6KA4O75676 772 aa15.57■□□□□ 0.08
CLRN1-205ENST00000472224 CYP19A1P11511 503 aaPredicted RBP15.57■□□□□ 0.08
CLRN1-205ENST00000472224 DALRD3Q5D0E6 543 aaKnown RBP15.57■□□□□ 0.08
CLRN1-205ENST00000472224 ZBTB1Q9Y2K1 713 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms