RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 CAMKK2Q96RR4 588 aa21.62■■□□□ 1.05
CCM2-205ENST00000472223 LAMB4A4D0S4 1761 aa21.61■■□□□ 1.05
CCM2-205ENST00000472223 ERBB4Q15303 1308 aa21.61■■□□□ 1.05
CCM2-205ENST00000472223 CYP19A1P11511 503 aaPredicted RBP21.61■■□□□ 1.05
CCM2-205ENST00000472223 KCNQ4P56696 695 aa21.61■■□□□ 1.05
CCM2-205ENST00000472223 ITPK1Q13572 414 aa21.61■■□□□ 1.05
CCM2-205ENST00000472223 AK7Q96M32 723 aa21.61■■□□□ 1.05
CCM2-205ENST00000472223 C5P01031 1676 aa21.6■■□□□ 1.05
CCM2-205ENST00000472223 ALDH1L2Q3SY69 923 aa21.6■■□□□ 1.05
CCM2-205ENST00000472223 CCDC87Q9NVE4 849 aa21.6■■□□□ 1.05
CCM2-205ENST00000472223 CRKLP46109 303 aaKnown RBP21.59■■□□□ 1.05
CCM2-205ENST00000472223 TJP1Q07157 1748 aa21.59■■□□□ 1.05
CCM2-205ENST00000472223 RC3H1Q5TC82 1133 aaKnown RBP21.59■■□□□ 1.05
CCM2-205ENST00000472223 NBPF14Q5TI25 921 aa21.59■■□□□ 1.05
CCM2-205ENST00000472223 SMC4Q9NTJ3 1288 aa21.59■■□□□ 1.05
CCM2-205ENST00000472223 CICQ96RK0 1608 aaPredicted RBP21.58■■□□□ 1.05
CCM2-205ENST00000472223 CNTNAP4Q9C0A0 1308 aa21.58■■□□□ 1.05
CCM2-205ENST00000472223 CANXP27824 592 aaKnown RBP21.58■■□□□ 1.05
CCM2-205ENST00000472223 PROM2Q8N271 834 aa21.58■■□□□ 1.05
CCM2-205ENST00000472223 LINC00116Q8NCU8 138 aa21.58■■□□□ 1.05
CCM2-205ENST00000472223 DDX21Q9NR30 783 aaKnown RBP eCLIP21.58■■□□□ 1.05
CCM2-205ENST00000472223 LRRC4BQ9NT99 713 aa21.58■■□□□ 1.05
CCM2-205ENST00000472223 HYPKQ9NX55 129 aa21.58■■□□□ 1.05
CCM2-205ENST00000472223 RCAN3Q9UKA8 241 aa21.58■■□□□ 1.05
CCM2-205ENST00000472223 CACNA1FO60840 1977 aa21.57■■□□□ 1.04
CCM2-205ENST00000472223 A1BGP04217 495 aa21.57■■□□□ 1.04
CCM2-205ENST00000472223 SLC4A2P04920 1241 aa21.57■■□□□ 1.04
CCM2-205ENST00000472223 MYL6BP14649 208 aa21.57■■□□□ 1.04
CCM2-205ENST00000472223 CHPF2Q9P2E5 772 aa21.57■■□□□ 1.04
CCM2-205ENST00000472223 ZNF330Q9Y3S2 320 aaPredicted RBP21.57■■□□□ 1.04
CCM2-205ENST00000472223 TAF1LQ8IZX4 1826 aa21.57■■□□□ 1.04
CCM2-205ENST00000472223 ARXQ96QS3 562 aa21.56■■□□□ 1.04
CCM2-205ENST00000472223 STK32BQ9NY57 414 aa21.56■■□□□ 1.04
CCM2-205ENST00000472223 RTCBQ9Y3I0 505 aaKnown RBP21.56■■□□□ 1.04
CCM2-205ENST00000472223 COL5A3P25940 1745 aaPredicted RBP21.55■■□□□ 1.04
CCM2-205ENST00000472223 TCERG1O14776 1098 aaKnown RBP21.55■■□□□ 1.04
CCM2-205ENST00000472223 GNPATO15228 680 aa21.55■■□□□ 1.04
CCM2-205ENST00000472223 IL6STP40189 918 aaPredicted RBP21.55■■□□□ 1.04
CCM2-205ENST00000472223 RARSP54136 660 aaKnown RBP21.55■■□□□ 1.04
CCM2-205ENST00000472223 A0A087WZG4 1122 aa21.54■■□□□ 1.04
CCM2-205ENST00000472223 SSH1Q8WYL5 1049 aa21.54■■□□□ 1.04
CCM2-205ENST00000472223 TFCP2L1Q9NZI6 479 aa21.54■■□□□ 1.04
CCM2-205ENST00000472223 C4BP0C0L5 1744 aa21.54■■□□□ 1.04
CCM2-205ENST00000472223 RPS6KA4O75676 772 aa21.53■■□□□ 1.04
CCM2-205ENST00000472223 DDX58O95786 925 aaKnown RBP21.53■■□□□ 1.04
CCM2-205ENST00000472223 INTS5Q6P9B9 1019 aaKnown RBP21.53■■□□□ 1.04
CCM2-205ENST00000472223 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.53■■□□□ 1.04
CCM2-205ENST00000472223 ZBTB1Q9Y2K1 713 aa21.53■■□□□ 1.04
CCM2-205ENST00000472223 IPO8O15397 1037 aaKnown RBP21.52■■□□□ 1.04
CCM2-205ENST00000472223 FLAD1Q8NFF5 587 aa21.52■■□□□ 1.04
CCM2-205ENST00000472223 BCL2L13Q9BXK5 485 aa21.52■■□□□ 1.04
CCM2-205ENST00000472223 PIP4K2AP48426 406 aaPredicted RBP21.51■■□□□ 1.03
CCM2-205ENST00000472223 TRAPPC3LQ5T215 181 aa21.51■■□□□ 1.03
CCM2-205ENST00000472223 KIF6Q6ZMV9 814 aa21.51■■□□□ 1.03
CCM2-205ENST00000472223 KIF16BQ96L93 1317 aa21.51■■□□□ 1.03
CCM2-205ENST00000472223 RREB1Q92766 1687 aa21.5■■□□□ 1.03
CCM2-205ENST00000472223 NBPF26B4DH59 902 aa21.5■■□□□ 1.03
CCM2-205ENST00000472223 ADRA2BP18089 450 aa21.5■■□□□ 1.03
CCM2-205ENST00000472223 AIMP1Q12904 312 aaKnown RBP21.5■■□□□ 1.03
CCM2-205ENST00000472223 NBPF10Q6P3W6 841 aaKnown RBP21.5■■□□□ 1.03
CCM2-205ENST00000472223 MRPL50Q8N5N7 158 aaKnown RBP21.5■■□□□ 1.03
CCM2-205ENST00000472223 NBPF15Q8N660 670 aa21.5■■□□□ 1.03
CCM2-205ENST00000472223 ANXA1P04083 346 aa21.49■■□□□ 1.03
CCM2-205ENST00000472223 SSFA2P28290 1259 aa21.49■■□□□ 1.03
CCM2-205ENST00000472223 PDIA6Q15084 440 aa21.49■■□□□ 1.03
CCM2-205ENST00000472223 FRAT1Q92837 279 aaPredicted RBP21.49■■□□□ 1.03
CCM2-205ENST00000472223 MYH14Q7Z406 1995 aaKnown RBP21.48■■□□□ 1.03
CCM2-205ENST00000472223 MSH5O43196 834 aa21.48■■□□□ 1.03
CCM2-205ENST00000472223 BCAR3O75815 825 aa21.48■■□□□ 1.03
CCM2-205ENST00000472223 PHF14O94880 888 aa21.48■■□□□ 1.03
CCM2-205ENST00000472223 RFC4P35249 363 aa21.48■■□□□ 1.03
CCM2-205ENST00000472223 EIF5P55010 431 aaKnown RBP21.48■■□□□ 1.03
CCM2-205ENST00000472223 BRPF1P55201 1214 aaPredicted RBP21.48■■□□□ 1.03
CCM2-205ENST00000472223 FKBP5Q13451 457 aaPredicted RBP21.48■■□□□ 1.03
CCM2-205ENST00000472223 SLC15A2Q16348 729 aa21.48■■□□□ 1.03
CCM2-205ENST00000472223 PROSER3Q2NL68 480 aa21.48■■□□□ 1.03
CCM2-205ENST00000472223 COPS6Q7L5N1 327 aa21.48■■□□□ 1.03
CCM2-205ENST00000472223 AKT1S1Q96B36 256 aa21.48■■□□□ 1.03
CCM2-205ENST00000472223 PTPRCP08575 1304 aa21.48■■□□□ 1.03
CCM2-205ENST00000472223 ZPR1O75312 459 aa21.47■■□□□ 1.03
CCM2-205ENST00000472223 FLIIQ13045 1269 aa21.47■■□□□ 1.03
CCM2-205ENST00000472223 DZIP3Q86Y13 1208 aaKnown RBP21.47■■□□□ 1.03
CCM2-205ENST00000472223 XAGE3Q8WTP9 111 aa21.47■■□□□ 1.03
CCM2-205ENST00000472223 NUP188Q5SRE5 1749 aa21.46■■□□□ 1.03
CCM2-205ENST00000472223 MS4A1P11836 297 aa21.46■■□□□ 1.03
CCM2-205ENST00000472223 RIC3Q7Z5B4 369 aa21.46■■□□□ 1.03
CCM2-205ENST00000472223 PHAXQ9H814 394 aaKnown RBP21.46■■□□□ 1.03
CCM2-205ENST00000472223 COL15A1P39059 1388 aa21.46■■□□□ 1.03
CCM2-205ENST00000472223 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.45■■□□□ 1.02
CCM2-205ENST00000472223 ANKRD13DQ6ZTN6 518 aa21.45■■□□□ 1.02
CCM2-205ENST00000472223 API5Q9BZZ5 524 aaKnown RBP21.45■■□□□ 1.02
CCM2-205ENST00000472223 NOB1Q9ULX3 412 aaKnown RBP21.45■■□□□ 1.02
CCM2-205ENST00000472223 ZNF827Q17R98 1081 aa21.44■■□□□ 1.02
CCM2-205ENST00000472223 ZKSCAN2Q63HK3 967 aa21.44■■□□□ 1.02
CCM2-205ENST00000472223 ARHGAP45Q92619 1136 aa21.44■■□□□ 1.02
CCM2-205ENST00000472223 TBC1D2BQ9UPU7 963 aa21.44■■□□□ 1.02
CCM2-205ENST00000472223 ZNF652Q9Y2D9 606 aa21.44■■□□□ 1.02
CCM2-205ENST00000472223 G2E3Q7L622 706 aa21.43■■□□□ 1.02
CCM2-205ENST00000472223 PLBD2Q8NHP8 589 aa21.43■■□□□ 1.02
CCM2-205ENST00000472223 ARHGEF1Q92888 912 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms