RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 TRIM6-TRIM34B2RNG4 842 aa18.5■□□□□ 0.55
UBXN11-213ENST00000472155 HSP90AA1P07900 732 aaKnown RBP18.5■□□□□ 0.55
UBXN11-213ENST00000472155 RTN4Q9NQC3 1192 aaKnown RBP18.49■□□□□ 0.55
UBXN11-213ENST00000472155 POLA2Q14181 598 aa18.49■□□□□ 0.55
UBXN11-213ENST00000472155 TUBGCP6Q96RT7 1819 aa18.48■□□□□ 0.55
UBXN11-213ENST00000472155 HOXB7P09629 217 aa18.48■□□□□ 0.55
UBXN11-213ENST00000472155 NFATC2IPQ8NCF5 419 aa18.48■□□□□ 0.55
UBXN11-213ENST00000472155 DBF4Q9UBU7 674 aaPredicted RBP18.48■□□□□ 0.55
UBXN11-213ENST00000472155 MEGF6O75095 1541 aa18.48■□□□□ 0.55
UBXN11-213ENST00000472155 HEG1Q9ULI3 1381 aa18.48■□□□□ 0.55
UBXN11-213ENST00000472155 ERC2O15083 957 aa18.48■□□□□ 0.55
UBXN11-213ENST00000472155 KDM6AO15550 1401 aaPredicted RBP18.47■□□□□ 0.55
UBXN11-213ENST00000472155 PALD1Q9ULE6 856 aa18.47■□□□□ 0.55
UBXN11-213ENST00000472155 CAMTA1Q9Y6Y1 1673 aa18.47■□□□□ 0.55
UBXN11-213ENST00000472155 SSFA2P28290 1259 aa18.47■□□□□ 0.55
UBXN11-213ENST00000472155 PDIA6Q15084 440 aa18.47■□□□□ 0.55
UBXN11-213ENST00000472155 PA2G4Q9UQ80 394 aaKnown RBP18.47■□□□□ 0.55
UBXN11-213ENST00000472155 CSB-PGBD3P0DP91 1061 aa18.46■□□□□ 0.55
UBXN11-213ENST00000472155 RHPN1Q8TCX5 695 aa18.46■□□□□ 0.55
UBXN11-213ENST00000472155 RAPGEF4Q8WZA2 1011 aa18.46■□□□□ 0.55
UBXN11-213ENST00000472155 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.46■□□□□ 0.55
UBXN11-213ENST00000472155 MYL6BP14649 208 aa18.46■□□□□ 0.55
UBXN11-213ENST00000472155 PKP1Q13835 747 aa18.46■□□□□ 0.55
UBXN11-213ENST00000472155 CASC1Q6TDU7 716 aa18.46■□□□□ 0.55
UBXN11-213ENST00000472155 KIF1AQ12756 1690 aa18.46■□□□□ 0.55
UBXN11-213ENST00000472155 CHMLP26374 656 aa18.45■□□□□ 0.54
UBXN11-213ENST00000472155 RABEP1Q15276 862 aa18.45■□□□□ 0.54
UBXN11-213ENST00000472155 ESYT1Q9BSJ8 1104 aa18.45■□□□□ 0.54
UBXN11-213ENST00000472155 SIPA1L3O60292 1781 aaPredicted RBP18.45■□□□□ 0.54
UBXN11-213ENST00000472155 RAB3GAP1Q15042 981 aa18.45■□□□□ 0.54
UBXN11-213ENST00000472155 NPHP3Q7Z494 1330 aa18.44■□□□□ 0.54
UBXN11-213ENST00000472155 TRAK2O60296 914 aa18.44■□□□□ 0.54
UBXN11-213ENST00000472155 PHKG2P15735 406 aa18.44■□□□□ 0.54
UBXN11-213ENST00000472155 STAP2Q9UGK3 403 aa18.44■□□□□ 0.54
UBXN11-213ENST00000472155 CYP27B1O15528 508 aa18.44■□□□□ 0.54
UBXN11-213ENST00000472155 ZNF790Q6PG37 636 aa18.44■□□□□ 0.54
UBXN11-213ENST00000472155 ZGPATQ8N5A5 531 aaKnown RBP18.44■□□□□ 0.54
UBXN11-213ENST00000472155 KSR2Q6VAB6 950 aa18.43■□□□□ 0.54
UBXN11-213ENST00000472155 JARID2Q92833 1246 aaPredicted RBP18.43■□□□□ 0.54
UBXN11-213ENST00000472155 REC8O95072 547 aa18.43■□□□□ 0.54
UBXN11-213ENST00000472155 PI4K2BQ8TCG2 481 aa18.43■□□□□ 0.54
UBXN11-213ENST00000472155 KAZALD1Q96I82 304 aa18.43■□□□□ 0.54
UBXN11-213ENST00000472155 ZNF496Q96IT1 587 aaPredicted RBP18.43■□□□□ 0.54
UBXN11-213ENST00000472155 SLC52A2Q9HAB3 445 aa18.43■□□□□ 0.54
UBXN11-213ENST00000472155 C9orf78Q9NZ63 289 aaPredicted RBP18.42■□□□□ 0.54
UBXN11-213ENST00000472155 COL18A1P39060 1754 aa18.42■□□□□ 0.54
UBXN11-213ENST00000472155 ANO2Q9NQ90 1003 aa18.42■□□□□ 0.54
UBXN11-213ENST00000472155 CHAMP1Q96JM3 812 aa18.41■□□□□ 0.54
UBXN11-213ENST00000472155 USP16Q9Y5T5 823 aa18.41■□□□□ 0.54
UBXN11-213ENST00000472155 TATP17735 454 aaPredicted RBP18.41■□□□□ 0.54
UBXN11-213ENST00000472155 SUCLG2Q96I99 432 aa18.41■□□□□ 0.54
UBXN11-213ENST00000472155 C5P01031 1676 aa18.41■□□□□ 0.54
UBXN11-213ENST00000472155 IGKV5-2P06315 115 aa18.4■□□□□ 0.54
UBXN11-213ENST00000472155 NOL8Q76FK4 1167 aaKnown RBP18.4■□□□□ 0.54
UBXN11-213ENST00000472155 KLHDC4Q8TBB5 520 aa18.4■□□□□ 0.54
UBXN11-213ENST00000472155 DDX21Q9NR30 783 aaKnown RBP eCLIP18.39■□□□□ 0.54
UBXN11-213ENST00000472155 CRYBG1Q9Y4K1 1723 aa18.39■□□□□ 0.53
UBXN11-213ENST00000472155 ADAMTS7Q9UKP4 1686 aa18.39■□□□□ 0.53
UBXN11-213ENST00000472155 OVOS2A0A0G2JMS6 1433 aa18.39■□□□□ 0.53
UBXN11-213ENST00000472155 NEK4P51957 841 aa18.38■□□□□ 0.53
UBXN11-213ENST00000472155 OS9Q13438 667 aaPredicted RBP18.38■□□□□ 0.53
UBXN11-213ENST00000472155 KIF1BPQ96EK5 621 aa18.38■□□□□ 0.53
UBXN11-213ENST00000472155 BICC1Q9H694 974 aaKnown RBP18.38■□□□□ 0.53
UBXN11-213ENST00000472155 SPATA31A3Q5VYP0 1347 aa18.38■□□□□ 0.53
UBXN11-213ENST00000472155 RAB11FIP3O75154 756 aa18.38■□□□□ 0.53
UBXN11-213ENST00000472155 CADPS2Q86UW7 1296 aa18.38■□□□□ 0.53
UBXN11-213ENST00000472155 XAGE3Q8WTP9 111 aa18.38■□□□□ 0.53
UBXN11-213ENST00000472155 CIZ1Q9ULV3 898 aaPredicted RBP18.38■□□□□ 0.53
UBXN11-213ENST00000472155 TNS3Q68CZ2 1445 aa18.38■□□□□ 0.53
UBXN11-213ENST00000472155 SCN11AQ9UI33 1791 aa18.38■□□□□ 0.53
UBXN11-213ENST00000472155 BRINP3Q76B58 766 aa18.37■□□□□ 0.53
UBXN11-213ENST00000472155 COPS6Q7L5N1 327 aa18.37■□□□□ 0.53
UBXN11-213ENST00000472155 HYPKQ9NX55 129 aa18.37■□□□□ 0.53
UBXN11-213ENST00000472155 UPF3BQ9BZI7 483 aaKnown RBP18.37■□□□□ 0.53
UBXN11-213ENST00000472155 EPHA10Q5JZY3 1008 aa18.36■□□□□ 0.53
UBXN11-213ENST00000472155 IFNL2Q8IZJ0 200 aa18.36■□□□□ 0.53
UBXN11-213ENST00000472155 SPG7Q9UQ90 795 aa18.36■□□□□ 0.53
UBXN11-213ENST00000472155 GRM8O00222 908 aa18.36■□□□□ 0.53
UBXN11-213ENST00000472155 RIC3Q7Z5B4 369 aa18.36■□□□□ 0.53
UBXN11-213ENST00000472155 SIL1Q9H173 461 aa18.36■□□□□ 0.53
UBXN11-213ENST00000472155 XIRP1Q702N8 1843 aaKnown RBP18.35■□□□□ 0.53
UBXN11-213ENST00000472155 ALDH1L1O75891 902 aa18.35■□□□□ 0.53
UBXN11-213ENST00000472155 LRP10Q7Z4F1 713 aa18.35■□□□□ 0.53
UBXN11-213ENST00000472155 LINS1Q8NG48 757 aa18.35■□□□□ 0.53
UBXN11-213ENST00000472155 MTX1Q13505 466 aa18.35■□□□□ 0.53
UBXN11-213ENST00000472155 FOXD4L5Q5VV16 416 aaPredicted RBP18.35■□□□□ 0.53
UBXN11-213ENST00000472155 FOXD4L4Q8WXT5 416 aaPredicted RBP18.35■□□□□ 0.53
UBXN11-213ENST00000472155 MYD88Q99836 296 aa18.35■□□□□ 0.53
UBXN11-213ENST00000472155 PANK2Q9BZ23 570 aa18.35■□□□□ 0.53
UBXN11-213ENST00000472155 DNAJC5Q9H3Z4 198 aa18.35■□□□□ 0.53
UBXN11-213ENST00000472155 ST18O60284 1047 aa18.34■□□□□ 0.53
UBXN11-213ENST00000472155 TLR7Q9NYK1 1049 aaKnown RBP18.34■□□□□ 0.53
UBXN11-213ENST00000472155 SASH1O94885 1247 aa18.34■□□□□ 0.53
UBXN11-213ENST00000472155 ZDHHC9Q9Y397 364 aa18.34■□□□□ 0.53
UBXN11-213ENST00000472155 DDX11L8A8MPP1 907 aa18.33■□□□□ 0.53
UBXN11-213ENST00000472155 CWC27Q6UX04 472 aaKnown RBP18.33■□□□□ 0.53
UBXN11-213ENST00000472155 DCCP43146 1447 aa18.33■□□□□ 0.52
UBXN11-213ENST00000472155 DTNBO60941 627 aa18.33■□□□□ 0.52
UBXN11-213ENST00000472155 TMX3Q96JJ7 454 aa18.33■□□□□ 0.52
UBXN11-213ENST00000472155 ZNF335Q9H4Z2 1342 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms