RNA–Protein interactions for RNA: ENST00000471960.5

ARPC1A-204, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

TSL 3

Gene ARPC1A, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-204ENST00000471960 MIS18AQ9NYP9 233 aa18.49■□□□□ 0.55
ARPC1A-204ENST00000471960 CANXP27824 592 aaKnown RBP18.48■□□□□ 0.55
ARPC1A-204ENST00000471960 DDR1Q08345 913 aa18.48■□□□□ 0.55
ARPC1A-204ENST00000471960 NLGN1Q8N2Q7 840 aa18.48■□□□□ 0.55
ARPC1A-204ENST00000471960 THUMPD2Q9BTF0 503 aaKnown RBP18.48■□□□□ 0.55
ARPC1A-204ENST00000471960 KIF13BQ9NQT8 1826 aa18.48■□□□□ 0.55
ARPC1A-204ENST00000471960 MYBBP1AQ9BQG0 1328 aaKnown RBP18.48■□□□□ 0.55
ARPC1A-204ENST00000471960 N4BP2Q86UW6 1770 aaPredicted RBP18.47■□□□□ 0.55
ARPC1A-204ENST00000471960 COL15A1P39059 1388 aa18.47■□□□□ 0.55
ARPC1A-204ENST00000471960 USPL1Q5W0Q7 1092 aa18.47■□□□□ 0.55
ARPC1A-204ENST00000471960 RTF1Q92541 710 aaKnown RBP18.47■□□□□ 0.55
ARPC1A-204ENST00000471960 PIP4K2AP48426 406 aaPredicted RBP18.46■□□□□ 0.55
ARPC1A-204ENST00000471960 BCL2L12Q9HB09 334 aa18.46■□□□□ 0.55
ARPC1A-204ENST00000471960 A1BGP04217 495 aa18.45■□□□□ 0.54
ARPC1A-204ENST00000471960 NFE2L2Q16236 605 aa18.45■□□□□ 0.54
ARPC1A-204ENST00000471960 FMNL2Q96PY5 1086 aa18.45■□□□□ 0.54
ARPC1A-204ENST00000471960 C10orf71Q711Q0 1435 aa18.45■□□□□ 0.54
ARPC1A-204ENST00000471960 PXDNLA1KZ92 1463 aa18.45■□□□□ 0.54
ARPC1A-204ENST00000471960 HTATSF1O43719 755 aaKnown RBP18.44■□□□□ 0.54
ARPC1A-204ENST00000471960 PRKRIP1Q9H875 184 aaPredicted RBP18.44■□□□□ 0.54
ARPC1A-204ENST00000471960 USP16Q9Y5T5 823 aa18.44■□□□□ 0.54
ARPC1A-204ENST00000471960 TM4SF1P30408 202 aa18.43■□□□□ 0.54
ARPC1A-204ENST00000471960 EIF5P55010 431 aaKnown RBP18.43■□□□□ 0.54
ARPC1A-204ENST00000471960 NARFQ9UHQ1 456 aa18.43■□□□□ 0.54
ARPC1A-204ENST00000471960 A0A0G2JLW4 131 aa18.42■□□□□ 0.54
ARPC1A-204ENST00000471960 POLRMTO00411 1230 aaKnown RBP18.42■□□□□ 0.54
ARPC1A-204ENST00000471960 ZPR1O75312 459 aa18.42■□□□□ 0.54
ARPC1A-204ENST00000471960 STARD3NLO95772 234 aa18.42■□□□□ 0.54
ARPC1A-204ENST00000471960 CCDC146Q8IYE0 955 aa18.42■□□□□ 0.54
ARPC1A-204ENST00000471960 PARP3Q9Y6F1 533 aa18.42■□□□□ 0.54
ARPC1A-204ENST00000471960 KDM3BQ7LBC6 1761 aa18.42■□□□□ 0.54
ARPC1A-204ENST00000471960 AFDNP55196 1824 aaKnown RBP18.42■□□□□ 0.54
ARPC1A-204ENST00000471960 TAF7Q15545 349 aaPredicted RBP18.41■□□□□ 0.54
ARPC1A-204ENST00000471960 ZNF330Q9Y3S2 320 aaPredicted RBP18.41■□□□□ 0.54
ARPC1A-204ENST00000471960 DPEP1P16444 411 aa18.4■□□□□ 0.54
ARPC1A-204ENST00000471960 ZEB1P37275 1124 aaPredicted RBP18.4■□□□□ 0.54
ARPC1A-204ENST00000471960 NFIXQ14938 502 aa18.4■□□□□ 0.54
ARPC1A-204ENST00000471960 TBC1D2BQ9UPU7 963 aa18.4■□□□□ 0.54
ARPC1A-204ENST00000471960 RRP7AQ9Y3A4 280 aaKnown RBP18.4■□□□□ 0.54
ARPC1A-204ENST00000471960 MAPK8IP3Q9UPT6 1336 aa18.4■□□□□ 0.54
ARPC1A-204ENST00000471960 SCN7AQ01118 1682 aa18.39■□□□□ 0.53
ARPC1A-204ENST00000471960 NEFMP07197 916 aa18.39■□□□□ 0.53
ARPC1A-204ENST00000471960 TEX13AQ9BXU3 409 aaPredicted RBP18.39■□□□□ 0.53
ARPC1A-204ENST00000471960 BRCA1P38398 1863 aaKnown RBP18.38■□□□□ 0.53
ARPC1A-204ENST00000471960 NBPF26B4DH59 902 aa18.38■□□□□ 0.53
ARPC1A-204ENST00000471960 NBPF10Q6P3W6 841 aaKnown RBP18.38■□□□□ 0.53
ARPC1A-204ENST00000471960 NBPF15Q8N660 670 aa18.38■□□□□ 0.53
ARPC1A-204ENST00000471960 ZNF784Q8NCA9 323 aaPredicted RBP18.38■□□□□ 0.53
ARPC1A-204ENST00000471960 ADAMTS8Q9UP79 889 aa18.38■□□□□ 0.53
ARPC1A-204ENST00000471960 SNRPA1P09661 255 aaKnown RBP18.37■□□□□ 0.53
ARPC1A-204ENST00000471960 KCNA3P22001 575 aa18.37■□□□□ 0.53
ARPC1A-204ENST00000471960 TMPOP42166 694 aaKnown RBP18.37■□□□□ 0.53
ARPC1A-204ENST00000471960 RIPK4P57078 832 aa18.37■□□□□ 0.53
ARPC1A-204ENST00000471960 BICDL1Q6ZP65 573 aa18.37■□□□□ 0.53
ARPC1A-204ENST00000471960 NRXN2Q9P2S2 1712 aa18.37■□□□□ 0.53
ARPC1A-204ENST00000471960 GRIN3BO60391 1043 aa18.36■□□□□ 0.53
ARPC1A-204ENST00000471960 IL6STP40189 918 aaPredicted RBP18.36■□□□□ 0.53
ARPC1A-204ENST00000471960 CCDC184Q52MB2 194 aa18.36■□□□□ 0.53
ARPC1A-204ENST00000471960 TBC1D9BQ66K14 1250 aa18.36■□□□□ 0.53
ARPC1A-204ENST00000471960 CARMIL3Q8ND23 1372 aa18.35■□□□□ 0.53
ARPC1A-204ENST00000471960 CAMTA2O94983 1202 aa18.35■□□□□ 0.53
ARPC1A-204ENST00000471960 CHRNA5P30532 468 aa18.35■□□□□ 0.53
ARPC1A-204ENST00000471960 EIF4A1P60842 406 aaKnown RBP18.35■□□□□ 0.53
ARPC1A-204ENST00000471960 TGFB2P61812 414 aa18.35■□□□□ 0.53
ARPC1A-204ENST00000471960 NEUROD2Q15784 382 aa18.35■□□□□ 0.53
ARPC1A-204ENST00000471960 PNNQ9H307 717 aaKnown RBP18.35■□□□□ 0.53
ARPC1A-204ENST00000471960 LAMB4A4D0S4 1761 aa18.35■□□□□ 0.53
ARPC1A-204ENST00000471960 BCORQ6W2J9 1755 aa18.35■□□□□ 0.53
ARPC1A-204ENST00000471960 A0A087WZG4 1122 aa18.34■□□□□ 0.53
ARPC1A-204ENST00000471960 SERPINB2P05120 415 aa18.34■□□□□ 0.53
ARPC1A-204ENST00000471960 WDR43Q15061 677 aaKnown RBP eCLIP18.33■□□□□ 0.52
ARPC1A-204ENST00000471960 CCDC24Q8N4L8 307 aa18.33■□□□□ 0.52
ARPC1A-204ENST00000471960 BCS1LQ9Y276 419 aa18.33■□□□□ 0.52
ARPC1A-204ENST00000471960 ZNF316A6NFI3 1004 aaPredicted RBP18.32■□□□□ 0.52
ARPC1A-204ENST00000471960 GIGYF1O75420 1035 aaPredicted RBP18.32■□□□□ 0.52
ARPC1A-204ENST00000471960 DZIP3Q86Y13 1208 aaKnown RBP18.32■□□□□ 0.52
ARPC1A-204ENST00000471960 TRIM35Q9UPQ4 493 aa18.32■□□□□ 0.52
ARPC1A-204ENST00000471960 ANKRD31Q8N7Z5 1873 aa18.32■□□□□ 0.52
ARPC1A-204ENST00000471960 PNISRQ8TF01 805 aaKnown RBP18.31■□□□□ 0.52
ARPC1A-204ENST00000471960 RUNDC1Q96C34 613 aa18.31■□□□□ 0.52
ARPC1A-204ENST00000471960 TSPYL4Q9UJ04 414 aa18.29■□□□□ 0.52
ARPC1A-204ENST00000471960 ARFGEF1Q9Y6D6 1849 aa18.28■□□□□ 0.52
ARPC1A-204ENST00000471960 NGEFQ8N5V2 710 aa18.28■□□□□ 0.52
ARPC1A-204ENST00000471960 SENP3-EIF4A1A0A087X0R7 540 aa18.27■□□□□ 0.52
ARPC1A-204ENST00000471960 HLFQ16534 295 aa18.27■□□□□ 0.52
ARPC1A-204ENST00000471960 KRT24Q2M2I5 525 aa18.27■□□□□ 0.52
ARPC1A-204ENST00000471960 PRR5LQ6MZQ0 368 aa18.27■□□□□ 0.52
ARPC1A-204ENST00000471960 PIM2Q9P1W9 311 aa18.27■□□□□ 0.52
ARPC1A-204ENST00000471960 DLEC1Q9Y238 1755 aa18.27■□□□□ 0.51
ARPC1A-204ENST00000471960 COL11A2P13942 1736 aaPredicted RBP18.26■□□□□ 0.51
ARPC1A-204ENST00000471960 ATP10DQ9P241 1426 aa18.26■□□□□ 0.51
ARPC1A-204ENST00000471960 TTLL7Q6ZT98 887 aa18.26■□□□□ 0.51
ARPC1A-204ENST00000471960 ADCY9O60503 1353 aa18.26■□□□□ 0.51
ARPC1A-204ENST00000471960 MYL6BP14649 208 aa18.25■□□□□ 0.51
ARPC1A-204ENST00000471960 DALRD3Q5D0E6 543 aaKnown RBP18.25■□□□□ 0.51
ARPC1A-204ENST00000471960 ARHGAP27Q6ZUM4 889 aa18.25■□□□□ 0.51
ARPC1A-204ENST00000471960 CHL1O00533 1208 aa18.24■□□□□ 0.51
ARPC1A-204ENST00000471960 APAF1O14727 1248 aa18.24■□□□□ 0.51
ARPC1A-204ENST00000471960 ANXA1P04083 346 aa18.24■□□□□ 0.51
ARPC1A-204ENST00000471960 LMOD3Q0VAK6 560 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms