RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 RUBCNLQ9H714 662 aa5.24□□□□□ -1.57
SCN3A-207ENST00000471697 ARHGEF10LQ9HCE6 1279 aa5.24□□□□□ -1.57
SCN3A-207ENST00000471697 APBB1O00213 710 aa5.23□□□□□ -1.57
SCN3A-207ENST00000471697 GIGYF1O75420 1035 aaPredicted RBP5.23□□□□□ -1.57
SCN3A-207ENST00000471697 HSP90B1P14625 803 aaKnown RBP5.23□□□□□ -1.57
SCN3A-207ENST00000471697 CENPCQ03188 943 aa5.23□□□□□ -1.57
SCN3A-207ENST00000471697 RGS22Q8NE09 1264 aa5.23□□□□□ -1.57
SCN3A-207ENST00000471697 KRTAP4-2Q9BYR5 136 aa5.23□□□□□ -1.57
SCN3A-207ENST00000471697 OSBPL3Q9H4L5 887 aa5.23□□□□□ -1.57
SCN3A-207ENST00000471697 DNAAF2Q9NVR5 837 aaKnown RBP5.23□□□□□ -1.57
SCN3A-207ENST00000471697 ARID1BQ8NFD5 2236 aaPredicted RBP5.22□□□□□ -1.57
SCN3A-207ENST00000471697 GNRH1P01148 92 aa5.22□□□□□ -1.57
SCN3A-207ENST00000471697 PHKA2P46019 1235 aa5.22□□□□□ -1.57
SCN3A-207ENST00000471697 RNF20Q5VTR2 975 aa5.22□□□□□ -1.57
SCN3A-207ENST00000471697 CNKSR1Q969H4 720 aa5.22□□□□□ -1.57
SCN3A-207ENST00000471697 ZSCAN10Q96SZ4 725 aaPredicted RBP5.22□□□□□ -1.57
SCN3A-207ENST00000471697 GPBP1L1Q9HC44 474 aaPredicted RBP5.22□□□□□ -1.57
SCN3A-207ENST00000471697 PCDHGC4Q9Y5F7 938 aa5.22□□□□□ -1.57
SCN3A-207ENST00000471697 ARID3CA6NKF2 412 aa5.21□□□□□ -1.58
SCN3A-207ENST00000471697 RAD21O60216 631 aa5.21□□□□□ -1.58
SCN3A-207ENST00000471697 IL2RAP01589 272 aa5.21□□□□□ -1.58
SCN3A-207ENST00000471697 SCTRP47872 440 aa5.21□□□□□ -1.58
SCN3A-207ENST00000471697 C4orf17Q53FE4 359 aa5.21□□□□□ -1.58
SCN3A-207ENST00000471697 GNASQ5JWF2 1037 aa5.21□□□□□ -1.58
SCN3A-207ENST00000471697 PUS7Q96PZ0 661 aaKnown RBP5.21□□□□□ -1.58
SCN3A-207ENST00000471697 TRAIPQ9BWF2 469 aa5.21□□□□□ -1.58
SCN3A-207ENST00000471697 FHDC1Q9C0D6 1143 aaPredicted RBP5.21□□□□□ -1.58
SCN3A-207ENST00000471697 PRDM6Q9NQX0 595 aa5.21□□□□□ -1.58
SCN3A-207ENST00000471697 ELNP15502 786 aa5.2□□□□□ -1.58
SCN3A-207ENST00000471697 CDK11BP21127 795 aaKnown RBP5.2□□□□□ -1.58
SCN3A-207ENST00000471697 ZNF468Q5VIY5 522 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-207ENST00000471697 NLRP8Q86W28 1048 aa5.2□□□□□ -1.58
SCN3A-207ENST00000471697 EPS8L1Q8TE68 723 aa5.2□□□□□ -1.58
SCN3A-207ENST00000471697 MDFIQ99750 246 aa5.2□□□□□ -1.58
SCN3A-207ENST00000471697 ZCCHC2Q9C0B9 1178 aaKnown RBP5.2□□□□□ -1.58
SCN3A-207ENST00000471697 HCN2Q9UL51 889 aa5.2□□□□□ -1.58
SCN3A-207ENST00000471697 CDK11AQ9UQ88 783 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-207ENST00000471697 FZD5Q13467 585 aa5.19□□□□□ -1.58
SCN3A-207ENST00000471697 COL9A3Q14050 684 aaPredicted RBP5.19□□□□□ -1.58
SCN3A-207ENST00000471697 XAGE2Q96GT9 111 aa5.19□□□□□ -1.58
SCN3A-207ENST00000471697 ELOA3CA0A087WX78 387 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-207ENST00000471697 ELOA3DA6NLF2 546 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-207ENST00000471697 TNP2Q05952 138 aa5.18□□□□□ -1.58
SCN3A-207ENST00000471697 ADGRE1Q14246 886 aa5.18□□□□□ -1.58
SCN3A-207ENST00000471697 ELOA3BQ3SY89 546 aa5.18□□□□□ -1.58
SCN3A-207ENST00000471697 ELOA3Q8NG57 546 aa5.18□□□□□ -1.58
SCN3A-207ENST00000471697 C1orf216Q8TAB5 229 aa5.18□□□□□ -1.58
SCN3A-207ENST00000471697 RNF112Q9ULX5 631 aa5.18□□□□□ -1.58
SCN3A-207ENST00000471697 C9orf172C9J069 976 aa5.17□□□□□ -1.58
SCN3A-207ENST00000471697 ATXN7O15265 892 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-207ENST00000471697 MAPTP10636 758 aaKnown RBP5.17□□□□□ -1.58
SCN3A-207ENST00000471697 GTF2E1P29083 439 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-207ENST00000471697 FBXO31Q5XUX0 539 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-207ENST00000471697 TMEM214Q6NUQ4 689 aaKnown RBP5.17□□□□□ -1.58
SCN3A-207ENST00000471697 IL27Q8NEV9 243 aa5.17□□□□□ -1.58
SCN3A-207ENST00000471697 RHBDD1Q8TEB9 315 aa5.17□□□□□ -1.58
SCN3A-207ENST00000471697 KDM4CQ9H3R0 1056 aa5.17□□□□□ -1.58
SCN3A-207ENST00000471697 RAB6BQ9NRW1 208 aa5.17□□□□□ -1.58
SCN3A-207ENST00000471697 POLR3EQ9NVU0 708 aa5.17□□□□□ -1.58
SCN3A-207ENST00000471697 MCCD1P59942 119 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-207ENST00000471697 TRIM28Q13263 835 aaKnown RBP5.16□□□□□ -1.58
SCN3A-207ENST00000471697 MBTPS1Q14703 1052 aa5.16□□□□□ -1.58
SCN3A-207ENST00000471697 PPARGC1BQ86YN6 1023 aaKnown RBP5.16□□□□□ -1.58
SCN3A-207ENST00000471697 FAM117AQ9C073 453 aa5.16□□□□□ -1.58
SCN3A-207ENST00000471697 HMX1Q9NP08 348 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-207ENST00000471697 MTMR7Q9Y216 660 aa5.16□□□□□ -1.58
SCN3A-207ENST00000471697 PCDHB9Q9Y5E1 797 aa5.16□□□□□ -1.58
SCN3A-207ENST00000471697 ZBBXA8MT70 800 aa5.15□□□□□ -1.59
SCN3A-207ENST00000471697 CD33P20138 364 aa5.15□□□□□ -1.59
SCN3A-207ENST00000471697 ALAS2P22557 587 aa5.15□□□□□ -1.59
SCN3A-207ENST00000471697 PCBP4P57723 403 aaKnown RBP5.15□□□□□ -1.59
SCN3A-207ENST00000471697 TXNRD3Q86VQ6 643 aa5.15□□□□□ -1.59
SCN3A-207ENST00000471697 SSBP4Q9BWG4 385 aaPredicted RBP5.15□□□□□ -1.59
SCN3A-207ENST00000471697 ADARB2-AS1A8MUL3 147 aa5.14□□□□□ -1.59
SCN3A-207ENST00000471697 FAM229AH3BQW9 127 aa5.14□□□□□ -1.59
SCN3A-207ENST00000471697 FAM157BP0CG42 384 aa5.14□□□□□ -1.59
SCN3A-207ENST00000471697 ATP4AP20648 1035 aa5.14□□□□□ -1.59
SCN3A-207ENST00000471697 FLIIQ13045 1269 aa5.14□□□□□ -1.59
SCN3A-207ENST00000471697 GRIK4Q16099 956 aa5.14□□□□□ -1.59
SCN3A-207ENST00000471697 TBC1D9Q6ZT07 1266 aa5.14□□□□□ -1.59
SCN3A-207ENST00000471697 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.14□□□□□ -1.59
SCN3A-207ENST00000471697 ESF1Q9H501 851 aaKnown RBP5.14□□□□□ -1.59
SCN3A-207ENST00000471697 PCDHB11Q9Y5F2 797 aa5.14□□□□□ -1.59
SCN3A-207ENST00000471697 NID1P14543 1247 aa5.13□□□□□ -1.59
SCN3A-207ENST00000471697 LAMC2Q13753 1193 aa5.13□□□□□ -1.59
SCN3A-207ENST00000471697 CCDC82Q8N4S0 544 aa5.13□□□□□ -1.59
SCN3A-207ENST00000471697 ZNF592Q92610 1267 aa5.13□□□□□ -1.59
SCN3A-207ENST00000471697 DCDC2BA2VCK2 349 aa5.12□□□□□ -1.59
SCN3A-207ENST00000471697 A6NJR5 290 aa5.12□□□□□ -1.59
SCN3A-207ENST00000471697 M0R082 166 aa5.12□□□□□ -1.59
SCN3A-207ENST00000471697 AP1G2O75843 785 aa5.12□□□□□ -1.59
SCN3A-207ENST00000471697 SELPP16109 830 aa5.12□□□□□ -1.59
SCN3A-207ENST00000471697 NRG1Q02297 640 aaPredicted RBP5.12□□□□□ -1.59
SCN3A-207ENST00000471697 SKIV2LQ15477 1246 aaKnown RBP5.12□□□□□ -1.59
SCN3A-207ENST00000471697 ESCO1Q5FWF5 840 aa5.12□□□□□ -1.59
SCN3A-207ENST00000471697 TMCO4Q5TGY1 634 aa5.12□□□□□ -1.59
SCN3A-207ENST00000471697 PROCA1Q8NCQ7 364 aaPredicted RBP5.12□□□□□ -1.59
SCN3A-207ENST00000471697 ZNF417Q8TAU3 575 aa5.12□□□□□ -1.59
SCN3A-207ENST00000471697 LENG1Q96BZ8 264 aaPredicted RBP5.12□□□□□ -1.59
SCN3A-207ENST00000471697 ZNF587Q96SQ5 575 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms