RNA–Protein interactions for RNA: ENST00000471693.1

SRRM1-209, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 377 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-209ENST00000471693 CDK2AP1O14519 115 aa9.56□□□□□ -0.88
SRRM1-209ENST00000471693 ATXN7O15265 892 aaPredicted RBP9.56□□□□□ -0.88
SRRM1-209ENST00000471693 SKIP12755 728 aa9.56□□□□□ -0.88
SRRM1-209ENST00000471693 NFATC2IPQ8NCF5 419 aa9.56□□□□□ -0.88
SRRM1-209ENST00000471693 SLC4A9Q96Q91 983 aa9.56□□□□□ -0.88
SRRM1-209ENST00000471693 ZCCHC2Q9C0B9 1178 aaKnown RBP9.56□□□□□ -0.88
SRRM1-209ENST00000471693 GGA1Q9UJY5 639 aa9.56□□□□□ -0.88
SRRM1-209ENST00000471693 TMEM229AB2RXF0 380 aa9.55□□□□□ -0.88
SRRM1-209ENST00000471693 PIK3CDO00329 1044 aa9.55□□□□□ -0.88
SRRM1-209ENST00000471693 ARAFP10398 606 aa9.55□□□□□ -0.88
SRRM1-209ENST00000471693 SNRPNP63162 240 aaKnown RBP9.55□□□□□ -0.88
SRRM1-209ENST00000471693 MTFR1Q15390 333 aa9.55□□□□□ -0.88
SRRM1-209ENST00000471693 CABP1Q9NZU7 370 aa9.55□□□□□ -0.88
SRRM1-209ENST00000471693 LOC100996750A0A140TA64 210 aa9.54□□□□□ -0.88
SRRM1-209ENST00000471693 GTF2IP78347 998 aa9.54□□□□□ -0.88
SRRM1-209ENST00000471693 CTBSQ01459 385 aa9.54□□□□□ -0.88
SRRM1-209ENST00000471693 KRTAP4-6Q9BYQ5 205 aa9.54□□□□□ -0.88
SRRM1-209ENST00000471693 DNAAF2Q9NVR5 837 aaKnown RBP9.54□□□□□ -0.88
SRRM1-209ENST00000471693 A0A1W2PNR3 127 aa9.53□□□□□ -0.88
SRRM1-209ENST00000471693 C2CD2LO14523 706 aa9.53□□□□□ -0.88
SRRM1-209ENST00000471693 SPOCK3Q9BQ16 436 aa9.53□□□□□ -0.88
SRRM1-209ENST00000471693 PCDHGA11Q9Y5H2 935 aa9.53□□□□□ -0.88
SRRM1-209ENST00000471693 DCDC2BA2VCK2 349 aa9.52□□□□□ -0.89
SRRM1-209ENST00000471693 BICDL1Q6ZP65 573 aa9.52□□□□□ -0.89
SRRM1-209ENST00000471693 C1orf229Q6ZS94 237 aaPredicted RBP9.52□□□□□ -0.89
SRRM1-209ENST00000471693 ALG2Q9H553 416 aa9.52□□□□□ -0.89
SRRM1-209ENST00000471693 IQSEC3Q9UPP2 1182 aaPredicted RBP9.52□□□□□ -0.89
SRRM1-209ENST00000471693 KHNYNO15037 678 aaKnown RBP9.51□□□□□ -0.89
SRRM1-209ENST00000471693 EPXP11678 715 aa9.51□□□□□ -0.89
SRRM1-209ENST00000471693 ADH6P28332 368 aa9.51□□□□□ -0.89
SRRM1-209ENST00000471693 NCOA4Q13772 614 aa9.51□□□□□ -0.89
SRRM1-209ENST00000471693 FAM182BQ5T319 152 aa9.51□□□□□ -0.89
SRRM1-209ENST00000471693 TRIM50Q86XT4 487 aa9.51□□□□□ -0.89
SRRM1-209ENST00000471693 NEURL1BA8MQ27 555 aa9.5□□□□□ -0.89
SRRM1-209ENST00000471693 GNB5O14775 395 aa9.5□□□□□ -0.89
SRRM1-209ENST00000471693 MAPTP10636 758 aaKnown RBP9.5□□□□□ -0.89
SRRM1-209ENST00000471693 FLIIQ13045 1269 aa9.5□□□□□ -0.89
SRRM1-209ENST00000471693 AVENQ9NQS1 362 aaPredicted RBP9.5□□□□□ -0.89
SRRM1-209ENST00000471693 USP17L5A8MUK1 530 aa9.49□□□□□ -0.89
SRRM1-209ENST00000471693 FAM157BP0CG42 384 aa9.49□□□□□ -0.89
SRRM1-209ENST00000471693 UBTFP17480 764 aaKnown RBP9.49□□□□□ -0.89
SRRM1-209ENST00000471693 CD33P20138 364 aa9.49□□□□□ -0.89
SRRM1-209ENST00000471693 TNP2Q05952 138 aa9.49□□□□□ -0.89
SRRM1-209ENST00000471693 GRIN2CQ14957 1233 aa9.49□□□□□ -0.89
SRRM1-209ENST00000471693 ZNF295-AS1Q8N0V1 137 aa9.49□□□□□ -0.89
SRRM1-209ENST00000471693 ZNF358Q9NW07 568 aa9.49□□□□□ -0.89
SRRM1-209ENST00000471693 NOP53Q9NZM5 478 aaKnown RBP9.49□□□□□ -0.89
SRRM1-209ENST00000471693 SCHIP1Q9P0W5 487 aaPredicted RBP9.49□□□□□ -0.89
SRRM1-209ENST00000471693 SAMD5Q5TGI4 173 aa9.48□□□□□ -0.89
SRRM1-209ENST00000471693 ZIC5Q96T25 663 aa9.48□□□□□ -0.89
SRRM1-209ENST00000471693 PRR12Q9ULL5 1215 aa9.48□□□□□ -0.89
SRRM1-209ENST00000471693 ATP1A2P50993 1020 aa9.47□□□□□ -0.89
SRRM1-209ENST00000471693 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.47□□□□□ -0.89
SRRM1-209ENST00000471693 BTBD6Q96KE9 485 aa9.47□□□□□ -0.89
SRRM1-209ENST00000471693 NEUROD4Q9HD90 331 aa9.47□□□□□ -0.89
SRRM1-209ENST00000471693 ZNF232Q9UNY5 417 aa9.47□□□□□ -0.89
SRRM1-209ENST00000471693 USP3Q9Y6I4 520 aa9.47□□□□□ -0.89
SRRM1-209ENST00000471693 PROCP04070 461 aa9.46□□□□□ -0.9
SRRM1-209ENST00000471693 LAMC2Q13753 1193 aa9.46□□□□□ -0.9
SRRM1-209ENST00000471693 DEPDC4Q8N2C3 294 aa9.46□□□□□ -0.9
SRRM1-209ENST00000471693 POM121Q96HA1 1249 aa9.46□□□□□ -0.9
SRRM1-209ENST00000471693 GPC6Q9Y625 555 aaPredicted RBP9.46□□□□□ -0.9
SRRM1-209ENST00000471693 PARP3Q9Y6F1 533 aa9.46□□□□□ -0.9
SRRM1-209ENST00000471693 PRKCSHP14314 528 aaPredicted RBP9.45□□□□□ -0.9
SRRM1-209ENST00000471693 ZNF468Q5VIY5 522 aaPredicted RBP9.45□□□□□ -0.9
SRRM1-209ENST00000471693 CHSY3Q70JA7 882 aa9.45□□□□□ -0.9
SRRM1-209ENST00000471693 L3MBTL2Q969R5 705 aa9.45□□□□□ -0.9
SRRM1-209ENST00000471693 MARK1Q9P0L2 795 aa9.45□□□□□ -0.9
SRRM1-209ENST00000471693 CHMP3Q9Y3E7 222 aa9.45□□□□□ -0.9
SRRM1-209ENST00000471693 KRBA1A5PL33 1030 aa9.44□□□□□ -0.9
SRRM1-209ENST00000471693 ITGB2P05107 769 aa9.44□□□□□ -0.9
SRRM1-209ENST00000471693 COL8A1P27658 744 aa9.44□□□□□ -0.9
SRRM1-209ENST00000471693 DGKGP49619 791 aa9.44□□□□□ -0.9
SRRM1-209ENST00000471693 TEAD4Q15561 434 aa9.44□□□□□ -0.9
SRRM1-209ENST00000471693 LINC00114Q6XXX2 140 aa9.44□□□□□ -0.9
SRRM1-209ENST00000471693 SLC9A9Q8IVB4 645 aa9.44□□□□□ -0.9
SRRM1-209ENST00000471693 NOS2P35228 1153 aa9.43□□□□□ -0.9
SRRM1-209ENST00000471693 TXLNAP40222 546 aa9.43□□□□□ -0.9
SRRM1-209ENST00000471693 PLEKHM2Q8IWE5 1019 aa9.43□□□□□ -0.9
SRRM1-209ENST00000471693 TPCN2Q8NHX9 752 aa9.43□□□□□ -0.9
SRRM1-209ENST00000471693 RBM19Q9Y4C8 960 aaKnown RBP9.43□□□□□ -0.9
SRRM1-209ENST00000471693 SERTM1A2A2V5 107 aa9.42□□□□□ -0.9
SRRM1-209ENST00000471693 USP17L3A6NCW0 530 aa9.42□□□□□ -0.9
SRRM1-209ENST00000471693 USP17L4A6NCW7 530 aa9.42□□□□□ -0.9
SRRM1-209ENST00000471693 ADAM23O75077 832 aa9.42□□□□□ -0.9
SRRM1-209ENST00000471693 HOXB4P17483 251 aaPredicted RBP9.42□□□□□ -0.9
SRRM1-209ENST00000471693 USP17L2Q6R6M4 530 aa9.42□□□□□ -0.9
SRRM1-209ENST00000471693 USP17L1Q7RTZ2 530 aa9.42□□□□□ -0.9
SRRM1-209ENST00000471693 ZDHHC1Q8WTX9 485 aa9.42□□□□□ -0.9
SRRM1-209ENST00000471693 EFSO43281 561 aa9.41□□□□□ -0.9
SRRM1-209ENST00000471693 EPHA4P54764 986 aa9.41□□□□□ -0.9
SRRM1-209ENST00000471693 PCBP4P57723 403 aaKnown RBP9.41□□□□□ -0.9
SRRM1-209ENST00000471693 LRRC69Q6ZNQ3 347 aa9.41□□□□□ -0.9
SRRM1-209ENST00000471693 FCHSD1Q86WN1 690 aa9.41□□□□□ -0.9
SRRM1-209ENST00000471693 TNS4Q8IZW8 715 aa9.41□□□□□ -0.9
SRRM1-209ENST00000471693 RHPN1Q8TCX5 695 aa9.41□□□□□ -0.9
SRRM1-209ENST00000471693 SUV39H2Q9H5I1 410 aa9.41□□□□□ -0.9
SRRM1-209ENST00000471693 EML1O00423 815 aa9.4□□□□□ -0.9
SRRM1-209ENST00000471693 ALAS2P22557 587 aa9.4□□□□□ -0.9
SRRM1-209ENST00000471693 CCDC102BQ68D86 513 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms