RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 PKNOX2Q96KN3 472 aa4.03□□□□□ -1.76
CCNL1-214ENST00000471247 NUDT12Q9BQG2 462 aa4.03□□□□□ -1.76
CCNL1-214ENST00000471247 UNC93B1Q9H1C4 597 aa4.03□□□□□ -1.76
CCNL1-214ENST00000471247 MYOM2P54296 1465 aa4.03□□□□□ -1.76
CCNL1-214ENST00000471247 TXNDC2Q86VQ3 553 aa4.02□□□□□ -1.77
CCNL1-214ENST00000471247 CDCA7Q9BWT1 371 aaPredicted RBP4.02□□□□□ -1.77
CCNL1-214ENST00000471247 WNK3Q9BYP7 1800 aa4.02□□□□□ -1.77
CCNL1-214ENST00000471247 RNF20Q5VTR2 975 aa4.02□□□□□ -1.77
CCNL1-214ENST00000471247 SYMPKQ92797 1274 aaKnown RBP4.02□□□□□ -1.77
CCNL1-214ENST00000471247 ARID4BQ4LE39 1312 aaPredicted RBP4.02□□□□□ -1.77
CCNL1-214ENST00000471247 CHD2O14647 1828 aaKnown RBP4.02□□□□□ -1.77
CCNL1-214ENST00000471247 KIF20BQ96Q89 1820 aa4.02□□□□□ -1.77
CCNL1-214ENST00000471247 CCNB3Q8WWL7 1395 aa4.02□□□□□ -1.77
CCNL1-214ENST00000471247 PALM3A6NDB9 673 aaPredicted RBP4.02□□□□□ -1.77
CCNL1-214ENST00000471247 GOLGA8CPA6NN73 597 aa4.02□□□□□ -1.77
CCNL1-214ENST00000471247 ZBTB7BO15156 539 aaPredicted RBP4.02□□□□□ -1.77
CCNL1-214ENST00000471247 LARGE2Q8N3Y3 721 aa4.02□□□□□ -1.77
CCNL1-214ENST00000471247 SLC4A9Q96Q91 983 aa4.02□□□□□ -1.77
CCNL1-214ENST00000471247 QRICH2Q9H0J4 1663 aa4.02□□□□□ -1.77
CCNL1-214ENST00000471247 CDC42BPGQ6DT37 1551 aa4.02□□□□□ -1.77
CCNL1-214ENST00000471247 C4orf48Q5BLP8 95 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 ZNF511Q8NB15 262 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 GAS2L2Q8NHY3 880 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 GPRASP1Q5JY77 1395 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 HIRAP54198 1017 aaPredicted RBP4.01□□□□□ -1.77
CCNL1-214ENST00000471247 SWI5Q1ZZU3 235 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 TAS1R3Q7RTX0 852 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 STAC3Q96MF2 364 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 EGFL7Q9UHF1 273 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 FANCAO15360 1455 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 ERVK-7P63135 1459 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 ARHGAP31Q2M1Z3 1444 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 ITGAEP38570 1179 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 PRR20EP86478 221 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 PRR20CP86479 221 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 PRR20DP86480 221 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 PRR20BP86481 221 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 PRR20AP86496 221 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 MED14O60244 1454 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 NEO1Q92859 1461 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 ABCA3Q99758 1704 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 ANKRD30BQ9BXX2 1392 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 NWD1Q149M9 1564 aa4.01□□□□□ -1.77
CCNL1-214ENST00000471247 CEP170BQ9Y4F5 1589 aaPredicted RBP4.01□□□□□ -1.77
CCNL1-214ENST00000471247 ATP5J2-PTCD1G3V325 749 aa4□□□□□ -1.77
CCNL1-214ENST00000471247 PTK7Q13308 1070 aa4□□□□□ -1.77
CCNL1-214ENST00000471247 CCDC97Q96F63 343 aaPredicted RBP4□□□□□ -1.77
CCNL1-214ENST00000471247 ZNF777Q9ULD5 760 aaPredicted RBP4□□□□□ -1.77
CCNL1-214ENST00000471247 CCDC141Q6ZP82 1450 aa4□□□□□ -1.77
CCNL1-214ENST00000471247 FMN2Q9NZ56 1722 aa4□□□□□ -1.77
CCNL1-214ENST00000471247 DIP2AQ14689 1571 aa4□□□□□ -1.77
CCNL1-214ENST00000471247 LRRC37A3O60309 1634 aa4□□□□□ -1.77
CCNL1-214ENST00000471247 CICQ96RK0 1608 aaPredicted RBP4□□□□□ -1.77
CCNL1-214ENST00000471247 PRG4Q92954 1404 aaPredicted RBP4□□□□□ -1.77
CCNL1-214ENST00000471247 ERVK-9P63128 1117 aa4□□□□□ -1.77
CCNL1-214ENST00000471247 V9GY48 417 aaPredicted RBP4□□□□□ -1.77
CCNL1-214ENST00000471247 TRPM3Q9HCF6 1732 aaPredicted RBP4□□□□□ -1.77
CCNL1-214ENST00000471247 RALGAPBQ86X10 1494 aa4□□□□□ -1.77
CCNL1-214ENST00000471247 A0A0G2JS52 829 aa4□□□□□ -1.77
CCNL1-214ENST00000471247 WNT7AO00755 349 aa4□□□□□ -1.77
CCNL1-214ENST00000471247 FOXK2Q01167 660 aa4□□□□□ -1.77
CCNL1-214ENST00000471247 KCNC4Q03721 635 aa4□□□□□ -1.77
CCNL1-214ENST00000471247 SHANK3Q9BYB0 1731 aa4□□□□□ -1.77
CCNL1-214ENST00000471247 CASZ1Q86V15 1759 aa3.99□□□□□ -1.77
CCNL1-214ENST00000471247 COL19A1Q14993 1142 aa3.99□□□□□ -1.77
CCNL1-214ENST00000471247 PUS10Q3MIT2 529 aaKnown RBP3.99□□□□□ -1.77
CCNL1-214ENST00000471247 PCDHGA11Q9Y5H2 935 aa3.99□□□□□ -1.77
CCNL1-214ENST00000471247 ALKQ9UM73 1620 aa3.99□□□□□ -1.77
CCNL1-214ENST00000471247 DEKP35659 375 aaKnown RBP3.99□□□□□ -1.77
CCNL1-214ENST00000471247 ABL2P42684 1182 aa3.99□□□□□ -1.77
CCNL1-214ENST00000471247 SH3BP2P78314 561 aa3.99□□□□□ -1.77
CCNL1-214ENST00000471247 TRIM26Q12899 539 aaPredicted RBP3.99□□□□□ -1.77
CCNL1-214ENST00000471247 SEMA3FQ13275 785 aa3.99□□□□□ -1.77
CCNL1-214ENST00000471247 BPHLQ86WA6 291 aaPredicted RBP3.99□□□□□ -1.77
CCNL1-214ENST00000471247 FAM174AQ8TBP5 190 aa3.99□□□□□ -1.77
CCNL1-214ENST00000471247 MAP10Q9P2G4 905 aa3.99□□□□□ -1.77
CCNL1-214ENST00000471247 MTFR1Q15390 333 aa3.99□□□□□ -1.77
CCNL1-214ENST00000471247 TBC1D9Q6ZT07 1266 aa3.99□□□□□ -1.77
CCNL1-214ENST00000471247 CALR3Q96L12 384 aaKnown RBP3.99□□□□□ -1.77
CCNL1-214ENST00000471247 ZMIZ1Q9ULJ6 1067 aa3.99□□□□□ -1.77
CCNL1-214ENST00000471247 NOS1P29475 1434 aa3.99□□□□□ -1.77
CCNL1-214ENST00000471247 VAC14Q08AM6 782 aa3.98□□□□□ -1.77
CCNL1-214ENST00000471247 RNF166Q96A37 237 aaPredicted RBP3.98□□□□□ -1.77
CCNL1-214ENST00000471247 CPS1P31327 1500 aa3.98□□□□□ -1.77
CCNL1-214ENST00000471247 GLI3P10071 1580 aa3.98□□□□□ -1.77
CCNL1-214ENST00000471247 TRIM50Q86XT4 487 aa3.98□□□□□ -1.77
CCNL1-214ENST00000471247 SIRT1Q96EB6 747 aa3.98□□□□□ -1.77
CCNL1-214ENST00000471247 XAGE2Q96GT9 111 aa3.98□□□□□ -1.77
CCNL1-214ENST00000471247 KLF16Q9BXK1 252 aaPredicted RBP3.98□□□□□ -1.77
CCNL1-214ENST00000471247 VRTNQ9H8Y1 702 aa3.98□□□□□ -1.77
CCNL1-214ENST00000471247 POGZQ7Z3K3 1410 aa3.98□□□□□ -1.77
CCNL1-214ENST00000471247 MMRN1Q13201 1228 aa3.98□□□□□ -1.77
CCNL1-214ENST00000471247 ZNF295-AS1Q8N0V1 137 aa3.98□□□□□ -1.77
CCNL1-214ENST00000471247 CCDC85AQ96PX6 553 aaPredicted RBP3.98□□□□□ -1.77
CCNL1-214ENST00000471247 PRDM9Q9NQV7 894 aa3.98□□□□□ -1.77
CCNL1-214ENST00000471247 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.98□□□□□ -1.77
CCNL1-214ENST00000471247 EPHA4P54764 986 aa3.97□□□□□ -1.77
CCNL1-214ENST00000471247 SKOR1P84550 965 aa3.97□□□□□ -1.77
CCNL1-214ENST00000471247 ERFEQ4G0M1 354 aa3.97□□□□□ -1.77
CCNL1-214ENST00000471247 TFIP11Q9UBB9 837 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms