RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 SEPT14Q6ZU15 432 aa7.95□□□□□ -1.14
BRCA1-210ENST00000471181 BICD1Q96G01 975 aa7.95□□□□□ -1.14
BRCA1-210ENST00000471181 RAD54L2Q9Y4B4 1467 aa7.95□□□□□ -1.14
BRCA1-210ENST00000471181 MYO1BO43795 1136 aa7.95□□□□□ -1.14
BRCA1-210ENST00000471181 GJC1P36383 396 aa7.95□□□□□ -1.14
BRCA1-210ENST00000471181 MAP3K11Q16584 847 aa7.95□□□□□ -1.14
BRCA1-210ENST00000471181 AACSQ86V21 672 aa7.95□□□□□ -1.14
BRCA1-210ENST00000471181 GNAI2P04899 355 aa7.95□□□□□ -1.14
BRCA1-210ENST00000471181 MTIF2P46199 727 aaKnown RBP7.95□□□□□ -1.14
BRCA1-210ENST00000471181 CCDC40Q4G0X9 1142 aa7.95□□□□□ -1.14
BRCA1-210ENST00000471181 BLOC1S2Q6QNY1 142 aa7.95□□□□□ -1.14
BRCA1-210ENST00000471181 KIF18AQ8NI77 898 aa7.95□□□□□ -1.14
BRCA1-210ENST00000471181 RRP9O43818 475 aaKnown RBP7.94□□□□□ -1.14
BRCA1-210ENST00000471181 SNX16P57768 344 aa7.94□□□□□ -1.14
BRCA1-210ENST00000471181 TMEM266Q2M3C6 531 aa7.94□□□□□ -1.14
BRCA1-210ENST00000471181 ZHX1Q9UKY1 873 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-210ENST00000471181 CEP164Q9UPV0 1460 aa7.94□□□□□ -1.14
BRCA1-210ENST00000471181 SYCP3Q8IZU3 236 aa7.94□□□□□ -1.14
BRCA1-210ENST00000471181 PRPF31Q8WWY3 499 aaKnown RBP7.94□□□□□ -1.14
BRCA1-210ENST00000471181 GMNNO75496 209 aa7.94□□□□□ -1.14
BRCA1-210ENST00000471181 CWC27Q6UX04 472 aaKnown RBP7.94□□□□□ -1.14
BRCA1-210ENST00000471181 WHAMMQ8TF30 809 aa7.94□□□□□ -1.14
BRCA1-210ENST00000471181 CCDC85AQ96PX6 553 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-210ENST00000471181 SELENOSQ9BQE4 189 aa7.94□□□□□ -1.14
BRCA1-210ENST00000471181 JADE2Q9NQC1 790 aa7.94□□□□□ -1.14
BRCA1-210ENST00000471181 IDH1O75874 414 aaKnown RBP7.94□□□□□ -1.14
BRCA1-210ENST00000471181 CABP4P57796 275 aa7.94□□□□□ -1.14
BRCA1-210ENST00000471181 CETN1Q12798 172 aa7.94□□□□□ -1.14
BRCA1-210ENST00000471181 PDE1CQ14123 709 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-210ENST00000471181 KIAA0753Q2KHM9 967 aa7.94□□□□□ -1.14
BRCA1-210ENST00000471181 CCDC83Q8IWF9 413 aa7.94□□□□□ -1.14
BRCA1-210ENST00000471181 VTI1AQ96AJ9 217 aa7.94□□□□□ -1.14
BRCA1-210ENST00000471181 DACT3Q96B18 629 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-210ENST00000471181 AIDAQ96BJ3 306 aa7.94□□□□□ -1.14
BRCA1-210ENST00000471181 EPSTI1Q96J88 318 aa7.94□□□□□ -1.14
BRCA1-210ENST00000471181 EHMT1Q9H9B1 1298 aa7.94□□□□□ -1.14
BRCA1-210ENST00000471181 K7ELQ4 463 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-210ENST00000471181 DDX54Q8TDD1 881 aaKnown RBP7.94□□□□□ -1.14
BRCA1-210ENST00000471181 CLIP2Q9UDT6 1046 aa7.94□□□□□ -1.14
BRCA1-210ENST00000471181 SYCE3A1L190 88 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 POTEB2H3BUK9 544 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 KIF2AO00139 706 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-210ENST00000471181 CKAP4Q07065 602 aaKnown RBP7.93□□□□□ -1.14
BRCA1-210ENST00000471181 ABCC8Q09428 1581 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 CRCPO75575 148 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 DPH6Q7L8W6 267 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 MKNK2Q9HBH9 465 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 PDZRN3Q9UPQ7 1066 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 TMEM110-MUSTN1A8MSY1 372 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 MINDY4BA8MYZ0 360 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 ARID4AP29374 1257 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-210ENST00000471181 GSTA5Q7RTV2 222 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 RSPH3Q86UC2 560 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 SARNPP82979 210 aaKnown RBP7.93□□□□□ -1.14
BRCA1-210ENST00000471181 CEP57Q86XR8 500 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 ZSWIM4Q9H7M6 989 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 FAM114A2Q9NRY5 505 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 CTNNA3Q9UI47 895 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 CFAP157Q5JU67 520 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 ABCF2Q9UG63 623 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 PPP6R1Q9UPN7 881 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 SAMM50Q9Y512 469 aa7.93□□□□□ -1.14
BRCA1-210ENST00000471181 UACAQ9BZF9 1416 aa7.92□□□□□ -1.14
BRCA1-210ENST00000471181 PLEKHO1Q53GL0 409 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-210ENST00000471181 GBP7Q8N8V2 638 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-210ENST00000471181 RSPH14Q9UHP6 348 aa7.92□□□□□ -1.14
BRCA1-210ENST00000471181 CCT6BQ92526 530 aa7.92□□□□□ -1.14
BRCA1-210ENST00000471181 DDX12PQ92771 950 aa7.92□□□□□ -1.14
BRCA1-210ENST00000471181 UTP14AQ9BVJ6 771 aaKnown RBP7.92□□□□□ -1.14
BRCA1-210ENST00000471181 RNF216Q9NWF9 866 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-210ENST00000471181 ZBED9Q6R2W3 1325 aa7.92□□□□□ -1.14
BRCA1-210ENST00000471181 RAB3GAP2Q9H2M9 1393 aa7.92□□□□□ -1.14
BRCA1-210ENST00000471181 ZFYP08048 801 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-210ENST00000471181 GRM1Q13255 1194 aa7.92□□□□□ -1.14
BRCA1-210ENST00000471181 PPP4R3BQ5MIZ7 849 aa7.92□□□□□ -1.14
BRCA1-210ENST00000471181 CCDC174Q6PII3 467 aa7.92□□□□□ -1.14
BRCA1-210ENST00000471181 ZSCAN31Q96LW9 406 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-210ENST00000471181 ZNF219Q9P2Y4 722 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-210ENST00000471181 SMIM23A6NLE4 172 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 BAG4O95429 457 aaKnown RBP7.91□□□□□ -1.14
BRCA1-210ENST00000471181 CASTP20810 708 aaKnown RBP7.91□□□□□ -1.14
BRCA1-210ENST00000471181 IGHMBP2P38935 993 aaKnown RBP7.91□□□□□ -1.14
BRCA1-210ENST00000471181 GUCY1B3Q02153 619 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 TCHPQ9BT92 498 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 KRT13P13646 458 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 ERCC5P28715 1186 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-210ENST00000471181 SEPT8Q92599 483 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 RAB34Q9BZG1 259 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 GGNBP2Q9H3C7 697 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 CASQ2O14958 399 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-210ENST00000471181 NLRP6P59044 892 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 CCDC82Q8N4S0 544 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 ANO10Q9NW15 660 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 TNIKQ9UKE5 1360 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 TMC6Q7Z403 805 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 FERMT3Q86UX7 667 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 ATRIPQ8WXE1 791 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 C16orf45Q96MC5 204 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-210ENST00000471181 CADPSQ9ULU8 1353 aa7.91□□□□□ -1.14
BRCA1-210ENST00000471181 CCDC144AA2RUR9 1427 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms