RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 TSPAN10Q9H1Z9 355 aaPredicted RBP10.64□□□□□ -0.71
PRPF40A-206ENST00000471167 CRISPLD1Q9H336 500 aa10.64□□□□□ -0.71
PRPF40A-206ENST00000471167 H7C1W4 665 aa10.63□□□□□ -0.71
PRPF40A-206ENST00000471167 M0R2N6 131 aa10.63□□□□□ -0.71
PRPF40A-206ENST00000471167 POTEAQ6S8J7 498 aa10.63□□□□□ -0.71
PRPF40A-206ENST00000471167 CABP1Q9NZU7 370 aa10.63□□□□□ -0.71
PRPF40A-206ENST00000471167 STK17AQ9UEE5 414 aa10.63□□□□□ -0.71
PRPF40A-206ENST00000471167 LGR5O75473 907 aa10.62□□□□□ -0.71
PRPF40A-206ENST00000471167 GTF2E1P29083 439 aaPredicted RBP10.62□□□□□ -0.71
PRPF40A-206ENST00000471167 TEAD4Q15561 434 aa10.62□□□□□ -0.71
PRPF40A-206ENST00000471167 CDCA8Q53HL2 280 aa10.62□□□□□ -0.71
PRPF40A-206ENST00000471167 ZNF385CQ66K41 422 aaPredicted RBP10.62□□□□□ -0.71
PRPF40A-206ENST00000471167 GAS2L2Q8NHY3 880 aa10.62□□□□□ -0.71
PRPF40A-206ENST00000471167 ARID3CA6NKF2 412 aa10.61□□□□□ -0.71
PRPF40A-206ENST00000471167 ADAMTS2O95450 1211 aa10.61□□□□□ -0.71
PRPF40A-206ENST00000471167 DPYDQ12882 1025 aa10.61□□□□□ -0.71
PRPF40A-206ENST00000471167 L3MBTL2Q969R5 705 aa10.61□□□□□ -0.71
PRPF40A-206ENST00000471167 AIDAQ96BJ3 306 aa10.61□□□□□ -0.71
PRPF40A-206ENST00000471167 ZIC5Q96T25 663 aa10.61□□□□□ -0.71
PRPF40A-206ENST00000471167 FAM196BA6NMK8 535 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 USP17L15C9J2P7 530 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 USP17L10C9JJH3 530 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 USP17L13C9JLJ4 530 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 USP17L12C9JPN9 530 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 USP17L11C9JVI0 530 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 USP17L21D6R901 530 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 USP17L18D6R9N7 530 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 USP17L22D6RA61 530 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 USP17L17D6RBQ6 530 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 USP17L19D6RCP7 530 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 USP17L20D6RJB6 530 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 EML1O00423 815 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 BNIP3LO60238 219 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 NOS2P35228 1153 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 USP17L24Q0WX57 530 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 C1orf115Q9H7X2 142 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 VRTNQ9H8Y1 702 aa10.6□□□□□ -0.71
PRPF40A-206ENST00000471167 RFX1P22670 979 aa10.59□□□□□ -0.71
PRPF40A-206ENST00000471167 LYPD4Q6UWN0 246 aa10.59□□□□□ -0.71
PRPF40A-206ENST00000471167 A0A1W2PNR3 127 aa10.58□□□□□ -0.72
PRPF40A-206ENST00000471167 SRSF11Q05519 484 aaKnown RBP10.58□□□□□ -0.72
PRPF40A-206ENST00000471167 ZCCHC2Q9C0B9 1178 aaKnown RBP10.58□□□□□ -0.72
PRPF40A-206ENST00000471167 ZDHHC3Q9NYG2 299 aa10.58□□□□□ -0.72
PRPF40A-206ENST00000471167 IGF1RP08069 1367 aa10.57□□□□□ -0.72
PRPF40A-206ENST00000471167 C2CD2LO14523 706 aa10.57□□□□□ -0.72
PRPF40A-206ENST00000471167 ARHGEF15O94989 841 aa10.57□□□□□ -0.72
PRPF40A-206ENST00000471167 SEC13P55735 322 aa10.57□□□□□ -0.72
PRPF40A-206ENST00000471167 LBRQ14739 615 aaKnown RBP10.57□□□□□ -0.72
PRPF40A-206ENST00000471167 ANKMY2Q8IV38 441 aa10.57□□□□□ -0.72
PRPF40A-206ENST00000471167 C1orf216Q8TAB5 229 aa10.57□□□□□ -0.72
PRPF40A-206ENST00000471167 ABHD17AQ96GS6 310 aa10.57□□□□□ -0.72
PRPF40A-206ENST00000471167 CFHR5Q9BXR6 569 aa10.57□□□□□ -0.72
PRPF40A-206ENST00000471167 MBIPQ9NS73 344 aa10.57□□□□□ -0.72
PRPF40A-206ENST00000471167 LARP1Q6PKG0 1096 aaKnown RBP10.56□□□□□ -0.72
PRPF40A-206ENST00000471167 CSB-PGBD3P0DP91 1061 aa10.55□□□□□ -0.72
PRPF40A-206ENST00000471167 CTBSQ01459 385 aa10.55□□□□□ -0.72
PRPF40A-206ENST00000471167 PGBD3Q8N328 593 aa10.55□□□□□ -0.72
PRPF40A-206ENST00000471167 ACDQ96AP0 544 aa10.55□□□□□ -0.72
PRPF40A-206ENST00000471167 ATAD2Q6PL18 1390 aa10.54□□□□□ -0.72
PRPF40A-206ENST00000471167 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.54□□□□□ -0.72
PRPF40A-206ENST00000471167 SERTM1A2A2V5 107 aa10.54□□□□□ -0.72
PRPF40A-206ENST00000471167 HIRAP54198 1017 aaPredicted RBP10.54□□□□□ -0.72
PRPF40A-206ENST00000471167 NLRP8Q86W28 1048 aa10.54□□□□□ -0.72
PRPF40A-206ENST00000471167 ZMIZ1Q9ULJ6 1067 aa10.54□□□□□ -0.72
PRPF40A-206ENST00000471167 HCN4Q9Y3Q4 1203 aa10.54□□□□□ -0.72
PRPF40A-206ENST00000471167 CELA2BP08218 269 aaPredicted RBP10.53□□□□□ -0.72
PRPF40A-206ENST00000471167 PSMA6P60900 246 aaKnown RBP10.53□□□□□ -0.72
PRPF40A-206ENST00000471167 NBPF1Q3BBV0 1214 aa10.53□□□□□ -0.72
PRPF40A-206ENST00000471167 EFHC2Q5JST6 749 aa10.53□□□□□ -0.72
PRPF40A-206ENST00000471167 FOXR1Q6PIV2 292 aa10.53□□□□□ -0.72
PRPF40A-206ENST00000471167 SCG3Q8WXD2 468 aaKnown RBP10.53□□□□□ -0.72
PRPF40A-206ENST00000471167 TRERF1Q96PN7 1200 aa10.53□□□□□ -0.72
PRPF40A-206ENST00000471167 C2orf49Q9BVC5 232 aaPredicted RBP10.53□□□□□ -0.72
PRPF40A-206ENST00000471167 MX2P20592 715 aa10.52□□□□□ -0.73
PRPF40A-206ENST00000471167 TNP2Q05952 138 aa10.52□□□□□ -0.73
PRPF40A-206ENST00000471167 FAM69CQ0P6D2 419 aa10.52□□□□□ -0.73
PRPF40A-206ENST00000471167 ARSJQ5FYB0 599 aaPredicted RBP10.52□□□□□ -0.73
PRPF40A-206ENST00000471167 C1orf229Q6ZS94 237 aaPredicted RBP10.52□□□□□ -0.73
PRPF40A-206ENST00000471167 STRN4Q9NRL3 753 aa10.52□□□□□ -0.73
PRPF40A-206ENST00000471167 PCDHGC4Q9Y5F7 938 aa10.52□□□□□ -0.73
PRPF40A-206ENST00000471167 GSK3AP49840 483 aa10.51□□□□□ -0.73
PRPF40A-206ENST00000471167 ATXN7L1Q9ULK2 861 aaPredicted RBP10.51□□□□□ -0.73
PRPF40A-206ENST00000471167 ZNF232Q9UNY5 417 aa10.51□□□□□ -0.73
PRPF40A-206ENST00000471167 ADAMTS8Q9UP79 889 aa10.51□□□□□ -0.73
PRPF40A-206ENST00000471167 PPP1R12BO60237 982 aaPredicted RBP10.5□□□□□ -0.73
PRPF40A-206ENST00000471167 GRIN2CQ14957 1233 aa10.5□□□□□ -0.73
PRPF40A-206ENST00000471167 STAG2Q8N3U4 1231 aa10.5□□□□□ -0.73
PRPF40A-206ENST00000471167 ATXN7O15265 892 aaPredicted RBP10.49□□□□□ -0.73
PRPF40A-206ENST00000471167 EFSO43281 561 aa10.49□□□□□ -0.73
PRPF40A-206ENST00000471167 MAPTP10636 758 aaKnown RBP10.49□□□□□ -0.73
PRPF40A-206ENST00000471167 TATP17735 454 aaPredicted RBP10.49□□□□□ -0.73
PRPF40A-206ENST00000471167 FGFR3P22607 806 aa10.49□□□□□ -0.73
PRPF40A-206ENST00000471167 WEE1P30291 646 aa10.49□□□□□ -0.73
PRPF40A-206ENST00000471167 ZNF280CQ8ND82 737 aa10.49□□□□□ -0.73
PRPF40A-206ENST00000471167 HINFPQ9BQA5 517 aa10.49□□□□□ -0.73
PRPF40A-206ENST00000471167 PHACTR1Q9C0D0 580 aa10.49□□□□□ -0.73
PRPF40A-206ENST00000471167 SAMD5Q5TGI4 173 aa10.48□□□□□ -0.73
PRPF40A-206ENST00000471167 LRRC69Q6ZNQ3 347 aa10.48□□□□□ -0.73
PRPF40A-206ENST00000471167 SVOPQ8N4V2 548 aa10.48□□□□□ -0.73
PRPF40A-206ENST00000471167 STK32AQ8WU08 396 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms