RNA–Protein interactions for RNA: ENST00000470815.1

HERC3-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-208ENST00000470815 AVENQ9NQS1 362 aaPredicted RBP7.2□□□□□ -1.26
HERC3-208ENST00000470815 NOP53Q9NZM5 478 aaKnown RBP7.2□□□□□ -1.26
HERC3-208ENST00000470815 COG6Q9Y2V7 657 aa7.2□□□□□ -1.26
HERC3-208ENST00000470815 STAU1O95793 577 aaKnown RBP7.19□□□□□ -1.26
HERC3-208ENST00000470815 IRF5Q13568 498 aa7.19□□□□□ -1.26
HERC3-208ENST00000470815 NIFKQ9BYG3 293 aaKnown RBP7.19□□□□□ -1.26
HERC3-208ENST00000470815 ZCCHC2Q9C0B9 1178 aaKnown RBP7.19□□□□□ -1.26
HERC3-208ENST00000470815 SUV39H2Q9H5I1 410 aa7.19□□□□□ -1.26
HERC3-208ENST00000470815 GDF10P55107 478 aa7.18□□□□□ -1.26
HERC3-208ENST00000470815 MAP7D1Q3KQU3 841 aa7.18□□□□□ -1.26
HERC3-208ENST00000470815 OXLD1Q5BKU9 147 aa7.18□□□□□ -1.26
HERC3-208ENST00000470815 A6NJR5 290 aa7.17□□□□□ -1.26
HERC3-208ENST00000470815 NEURL1BA8MQ27 555 aa7.17□□□□□ -1.26
HERC3-208ENST00000470815 ATXN7O15265 892 aaPredicted RBP7.17□□□□□ -1.26
HERC3-208ENST00000470815 UBTFP17480 764 aaKnown RBP7.17□□□□□ -1.26
HERC3-208ENST00000470815 ADH6P28332 368 aa7.17□□□□□ -1.26
HERC3-208ENST00000470815 SMTNP53814 917 aa7.17□□□□□ -1.26
HERC3-208ENST00000470815 ZNF295-AS1Q8N0V1 137 aa7.17□□□□□ -1.26
HERC3-208ENST00000470815 C1QTNF9BB2RNN3 333 aa7.16□□□□□ -1.26
HERC3-208ENST00000470815 FURINP09958 794 aa7.16□□□□□ -1.26
HERC3-208ENST00000470815 TNP2Q05952 138 aa7.16□□□□□ -1.26
HERC3-208ENST00000470815 NBPF1Q3BBV0 1214 aa7.16□□□□□ -1.26
HERC3-208ENST00000470815 SLC4A9Q96Q91 983 aa7.16□□□□□ -1.26
HERC3-208ENST00000470815 GDPD2Q9HCC8 539 aa7.16□□□□□ -1.26
HERC3-208ENST00000470815 ZDHHC3Q9NYG2 299 aa7.16□□□□□ -1.26
HERC3-208ENST00000470815 RAD21O60216 631 aa7.15□□□□□ -1.26
HERC3-208ENST00000470815 FAM157BP0CG42 384 aa7.15□□□□□ -1.26
HERC3-208ENST00000470815 MAPTP10636 758 aaKnown RBP7.15□□□□□ -1.26
HERC3-208ENST00000470815 MTFR1Q15390 333 aa7.15□□□□□ -1.26
HERC3-208ENST00000470815 CHSY3Q70JA7 882 aa7.15□□□□□ -1.26
HERC3-208ENST00000470815 CD163Q86VB7 1156 aa7.15□□□□□ -1.26
HERC3-208ENST00000470815 IQSEC3Q9UPP2 1182 aaPredicted RBP7.15□□□□□ -1.26
HERC3-208ENST00000470815 A0A1W2PNR3 127 aa7.14□□□□□ -1.27
HERC3-208ENST00000470815 CDK2AP1O14519 115 aa7.14□□□□□ -1.27
HERC3-208ENST00000470815 TATP17735 454 aaPredicted RBP7.14□□□□□ -1.27
HERC3-208ENST00000470815 WASHC4Q2M389 1173 aa7.14□□□□□ -1.27
HERC3-208ENST00000470815 SAMD5Q5TGI4 173 aa7.14□□□□□ -1.27
HERC3-208ENST00000470815 PLPP7Q8NBV4 271 aa7.14□□□□□ -1.27
HERC3-208ENST00000470815 AIDAQ96BJ3 306 aa7.14□□□□□ -1.27
HERC3-208ENST00000470815 POM121Q96HA1 1249 aa7.14□□□□□ -1.27
HERC3-208ENST00000470815 SOX11P35716 441 aa7.13□□□□□ -1.27
HERC3-208ENST00000470815 CHRNA4P43681 627 aa7.13□□□□□ -1.27
HERC3-208ENST00000470815 LAMC2Q13753 1193 aa7.13□□□□□ -1.27
HERC3-208ENST00000470815 ZNF468Q5VIY5 522 aaPredicted RBP7.13□□□□□ -1.27
HERC3-208ENST00000470815 FCHSD1Q86WN1 690 aa7.13□□□□□ -1.27
HERC3-208ENST00000470815 Q8N3U1 123 aa7.13□□□□□ -1.27
HERC3-208ENST00000470815 FNBP4Q8N3X1 1017 aaPredicted RBP7.13□□□□□ -1.27
HERC3-208ENST00000470815 KLF15Q9UIH9 416 aa7.13□□□□□ -1.27
HERC3-208ENST00000470815 HCN2Q9UL51 889 aa7.13□□□□□ -1.27
HERC3-208ENST00000470815 DCDC2BA2VCK2 349 aa7.12□□□□□ -1.27
HERC3-208ENST00000470815 A6NJY4 79 aa7.12□□□□□ -1.27
HERC3-208ENST00000470815 TMEM229AB2RXF0 380 aa7.12□□□□□ -1.27
HERC3-208ENST00000470815 CD33P20138 364 aa7.12□□□□□ -1.27
HERC3-208ENST00000470815 ABL2P42684 1182 aa7.12□□□□□ -1.27
HERC3-208ENST00000470815 VAC14Q08AM6 782 aa7.12□□□□□ -1.27
HERC3-208ENST00000470815 ARSJQ5FYB0 599 aaPredicted RBP7.12□□□□□ -1.27
HERC3-208ENST00000470815 KHNYNO15037 678 aaKnown RBP7.11□□□□□ -1.27
HERC3-208ENST00000470815 ERICH6Q7L0X2 663 aa7.11□□□□□ -1.27
HERC3-208ENST00000470815 WWC1Q8IX03 1113 aa7.11□□□□□ -1.27
HERC3-208ENST00000470815 ZIC5Q96T25 663 aa7.11□□□□□ -1.27
HERC3-208ENST00000470815 EFSO43281 561 aa7.1□□□□□ -1.27
HERC3-208ENST00000470815 PROSER2Q86WR7 435 aaPredicted RBP7.1□□□□□ -1.27
HERC3-208ENST00000470815 CLUAP1Q96AJ1 413 aa7.1□□□□□ -1.27
HERC3-208ENST00000470815 SPATA31C1P0DKV0 1188 aa7.09□□□□□ -1.27
HERC3-208ENST00000470815 SEMA3FQ13275 785 aa7.09□□□□□ -1.27
HERC3-208ENST00000470815 TRIM11Q96F44 468 aa7.09□□□□□ -1.27
HERC3-208ENST00000470815 MARK1Q9P0L2 795 aa7.09□□□□□ -1.27
HERC3-208ENST00000470815 SERTAD1Q9UHV2 236 aa7.09□□□□□ -1.27
HERC3-208ENST00000470815 GJA3Q9Y6H8 435 aa7.09□□□□□ -1.27
HERC3-208ENST00000470815 USP3Q9Y6I4 520 aa7.09□□□□□ -1.27
HERC3-208ENST00000470815 ELOA3CA0A087WX78 387 aaPredicted RBP7.08□□□□□ -1.28
HERC3-208ENST00000470815 ELOA3DA6NLF2 546 aaPredicted RBP7.08□□□□□ -1.28
HERC3-208ENST00000470815 BACH1O14867 736 aa7.08□□□□□ -1.28
HERC3-208ENST00000470815 ELOA3BQ3SY89 546 aa7.08□□□□□ -1.28
HERC3-208ENST00000470815 ELOA3Q8NG57 546 aa7.08□□□□□ -1.28
HERC3-208ENST00000470815 MDFIQ99750 246 aa7.08□□□□□ -1.28
HERC3-208ENST00000470815 CABP1Q9NZU7 370 aa7.08□□□□□ -1.28
HERC3-208ENST00000470815 PRR12Q9ULL5 1215 aa7.08□□□□□ -1.28
HERC3-208ENST00000470815 PCDHGA11Q9Y5H2 935 aa7.08□□□□□ -1.28
HERC3-208ENST00000470815 GPC6Q9Y625 555 aaPredicted RBP7.08□□□□□ -1.28
HERC3-208ENST00000470815 SPDYE3A6NKU9 549 aa7.07□□□□□ -1.28
HERC3-208ENST00000470815 LZTS3O60299 673 aaPredicted RBP7.07□□□□□ -1.28
HERC3-208ENST00000470815 PCBP4P57723 403 aaKnown RBP7.07□□□□□ -1.28
HERC3-208ENST00000470815 ZMYND15Q9H091 742 aa7.07□□□□□ -1.28
HERC3-208ENST00000470815 SCHIP1Q9P0W5 487 aaPredicted RBP7.07□□□□□ -1.28
HERC3-208ENST00000470815 ITGB7P26010 798 aa7.06□□□□□ -1.28
HERC3-208ENST00000470815 EML3Q32P44 896 aa7.06□□□□□ -1.28
HERC3-208ENST00000470815 BICDL1Q6ZP65 573 aa7.06□□□□□ -1.28
HERC3-208ENST00000470815 PLVAPQ9BX97 442 aa7.06□□□□□ -1.28
HERC3-208ENST00000470815 KRTAP4-8Q9BYQ9 185 aa7.06□□□□□ -1.28
HERC3-208ENST00000470815 STRN4Q9NRL3 753 aa7.06□□□□□ -1.28
HERC3-208ENST00000470815 SIN3BO75182 1162 aa7.05□□□□□ -1.28
HERC3-208ENST00000470815 ALAS2P22557 587 aa7.05□□□□□ -1.28
HERC3-208ENST00000470815 GATA4P43694 442 aa7.05□□□□□ -1.28
HERC3-208ENST00000470815 TEAD4Q15561 434 aa7.05□□□□□ -1.28
HERC3-208ENST00000470815 NFATC2IPQ8NCF5 419 aa7.05□□□□□ -1.28
HERC3-208ENST00000470815 ALG2Q9H553 416 aa7.05□□□□□ -1.28
HERC3-208ENST00000470815 NOD1Q9Y239 953 aa7.05□□□□□ -1.28
HERC3-208ENST00000470815 ADARB2-AS1A8MUL3 147 aa7.04□□□□□ -1.28
HERC3-208ENST00000470815 EML1O00423 815 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms