RNA–Protein interactions for RNA: ENST00000470695.1

IFT88-205, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-205ENST00000470695 TRIM27P14373 513 aa15.95■□□□□ 0.14
IFT88-205ENST00000470695 DDX21Q9NR30 783 aaKnown RBP eCLIP15.95■□□□□ 0.14
IFT88-205ENST00000470695 USP16Q9Y5T5 823 aa15.95■□□□□ 0.14
IFT88-205ENST00000470695 SBF2Q86WG5 1849 aa15.95■□□□□ 0.14
IFT88-205ENST00000470695 RGS12O14924 1447 aa15.94■□□□□ 0.14
IFT88-205ENST00000470695 CICQ96RK0 1608 aaPredicted RBP15.94■□□□□ 0.14
IFT88-205ENST00000470695 DZIP1LQ8IYY4 767 aaKnown RBP15.94■□□□□ 0.14
IFT88-205ENST00000470695 BCL11BQ9C0K0 894 aaPredicted RBP15.94■□□□□ 0.14
IFT88-205ENST00000470695 HYPKQ9NX55 129 aa15.94■□□□□ 0.14
IFT88-205ENST00000470695 CHPF2Q9P2E5 772 aa15.94■□□□□ 0.14
IFT88-205ENST00000470695 ZNF831Q5JPB2 1677 aa15.94■□□□□ 0.14
IFT88-205ENST00000470695 KAT6BQ8WYB5 2073 aa15.94■□□□□ 0.14
IFT88-205ENST00000470695 PALLDQ8WX93 1383 aa15.93■□□□□ 0.14
IFT88-205ENST00000470695 FAM182BQ5T319 152 aa15.93■□□□□ 0.14
IFT88-205ENST00000470695 C20orf194Q5TEA3 1177 aa15.93■□□□□ 0.14
IFT88-205ENST00000470695 NECTIN2Q92692 538 aa15.93■□□□□ 0.14
IFT88-205ENST00000470695 RBM42Q9BTD8 480 aaKnown RBP15.93■□□□□ 0.14
IFT88-205ENST00000470695 STARD3NLO95772 234 aa15.92■□□□□ 0.14
IFT88-205ENST00000470695 IRX6P78412 446 aaPredicted RBP15.92■□□□□ 0.14
IFT88-205ENST00000470695 FLIIQ13045 1269 aa15.92■□□□□ 0.14
IFT88-205ENST00000470695 PDIA6Q15084 440 aa15.92■□□□□ 0.14
IFT88-205ENST00000470695 FTSJ3Q8IY81 847 aaKnown RBP15.92■□□□□ 0.14
IFT88-205ENST00000470695 LOC102724428A0A0B4J2F2 783 aa15.91■□□□□ 0.14
IFT88-205ENST00000470695 SIK1P57059 783 aa15.91■□□□□ 0.14
IFT88-205ENST00000470695 G2E3Q7L622 706 aa15.91■□□□□ 0.14
IFT88-205ENST00000470695 SLC4A9Q96Q91 983 aa15.91■□□□□ 0.14
IFT88-205ENST00000470695 BTAF1O14981 1849 aa15.91■□□□□ 0.14
IFT88-205ENST00000470695 ABCC4O15439 1325 aa15.91■□□□□ 0.14
IFT88-205ENST00000470695 AAMPQ13685 434 aa15.9■□□□□ 0.14
IFT88-205ENST00000470695 DNAJC10Q8IXB1 793 aa15.9■□□□□ 0.14
IFT88-205ENST00000470695 PANK1Q8TE04 598 aa15.9■□□□□ 0.14
IFT88-205ENST00000470695 TJP1Q07157 1748 aa15.89■□□□□ 0.13
IFT88-205ENST00000470695 RLBP1P12271 317 aa15.89■□□□□ 0.13
IFT88-205ENST00000470695 LRP10Q7Z4F1 713 aa15.89■□□□□ 0.13
IFT88-205ENST00000470695 CLUAP1Q96AJ1 413 aa15.89■□□□□ 0.13
IFT88-205ENST00000470695 CRBNQ96SW2 442 aa15.89■□□□□ 0.13
IFT88-205ENST00000470695 TNNQ9UQP3 1299 aa15.89■□□□□ 0.13
IFT88-205ENST00000470695 CYP19A1P11511 503 aaPredicted RBP15.88■□□□□ 0.13
IFT88-205ENST00000470695 ATP6V1AP38606 617 aa15.88■□□□□ 0.13
IFT88-205ENST00000470695 FKBP5Q13451 457 aaPredicted RBP15.88■□□□□ 0.13
IFT88-205ENST00000470695 MVPQ14764 893 aaKnown RBP15.88■□□□□ 0.13
IFT88-205ENST00000470695 PROSER3Q2NL68 480 aa15.88■□□□□ 0.13
IFT88-205ENST00000470695 INTS3Q68E01 1043 aaKnown RBP15.88■□□□□ 0.13
IFT88-205ENST00000470695 PTF1AQ7RTS3 328 aa15.88■□□□□ 0.13
IFT88-205ENST00000470695 EXOC6Q8TAG9 804 aa15.88■□□□□ 0.13
IFT88-205ENST00000470695 PHAXQ9H814 394 aaKnown RBP15.88■□□□□ 0.13
IFT88-205ENST00000470695 PXDNLA1KZ92 1463 aa15.87■□□□□ 0.13
IFT88-205ENST00000470695 NBPF26B4DH59 902 aa15.87■□□□□ 0.13
IFT88-205ENST00000470695 DDX58O95786 925 aaKnown RBP15.87■□□□□ 0.13
IFT88-205ENST00000470695 HMGB2P26583 209 aaKnown RBP15.87■□□□□ 0.13
IFT88-205ENST00000470695 NBPF14Q5TI25 921 aa15.87■□□□□ 0.13
IFT88-205ENST00000470695 NBPF10Q6P3W6 841 aaKnown RBP15.87■□□□□ 0.13
IFT88-205ENST00000470695 NBPF15Q8N660 670 aa15.87■□□□□ 0.13
IFT88-205ENST00000470695 CHMP4BQ9H444 224 aaKnown RBP15.87■□□□□ 0.13
IFT88-205ENST00000470695 COG6Q9Y2V7 657 aa15.87■□□□□ 0.13
IFT88-205ENST00000470695 LY75O60449 1722 aa15.86■□□□□ 0.13
IFT88-205ENST00000470695 ANXA1P04083 346 aa15.86■□□□□ 0.13
IFT88-205ENST00000470695 A1BGP04217 495 aa15.86■□□□□ 0.13
IFT88-205ENST00000470695 TMEM57Q8N5G2 664 aa15.86■□□□□ 0.13
IFT88-205ENST00000470695 DDX19BQ9UMR2 479 aa15.86■□□□□ 0.13
IFT88-205ENST00000470695 TRIM37O94972 964 aa15.85■□□□□ 0.13
IFT88-205ENST00000470695 MYL6BP14649 208 aa15.85■□□□□ 0.13
IFT88-205ENST00000470695 CCT4P50991 539 aaKnown RBP15.85■□□□□ 0.13
IFT88-205ENST00000470695 KSR2Q6VAB6 950 aa15.85■□□□□ 0.13
IFT88-205ENST00000470695 PPP4R2Q9NY27 417 aa15.85■□□□□ 0.13
IFT88-205ENST00000470695 RREB1Q92766 1687 aa15.85■□□□□ 0.13
IFT88-205ENST00000470695 ITPK1Q13572 414 aa15.84■□□□□ 0.13
IFT88-205ENST00000470695 COPS6Q7L5N1 327 aa15.84■□□□□ 0.13
IFT88-205ENST00000470695 XAGE3Q8WTP9 111 aa15.84■□□□□ 0.13
IFT88-205ENST00000470695 COL5A3P25940 1745 aaPredicted RBP15.83■□□□□ 0.13
IFT88-205ENST00000470695 IL6STP40189 918 aaPredicted RBP15.83■□□□□ 0.12
IFT88-205ENST00000470695 ITPRIPQ8IWB1 547 aa15.83■□□□□ 0.12
IFT88-205ENST00000470695 DNAAF4Q8WXU2 420 aa15.83■□□□□ 0.12
IFT88-205ENST00000470695 CCDC87Q9NVE4 849 aa15.83■□□□□ 0.12
IFT88-205ENST00000470695 ADCY9O60503 1353 aa15.83■□□□□ 0.12
IFT88-205ENST00000470695 IBTKQ9P2D0 1353 aaPredicted RBP15.83■□□□□ 0.12
IFT88-205ENST00000470695 ATP10DQ9P241 1426 aa15.83■□□□□ 0.12
IFT88-205ENST00000470695 N4BP2Q86UW6 1770 aaPredicted RBP15.82■□□□□ 0.12
IFT88-205ENST00000470695 PI4KAP2A4QPH2 592 aa15.82■□□□□ 0.12
IFT88-205ENST00000470695 F6X3S4 739 aa15.82■□□□□ 0.12
IFT88-205ENST00000470695 PLSCR1O15162 318 aa15.82■□□□□ 0.12
IFT88-205ENST00000470695 CRKLP46109 303 aaKnown RBP15.82■□□□□ 0.12
IFT88-205ENST00000470695 SLC27A3Q5K4L6 730 aa15.82■□□□□ 0.12
IFT88-205ENST00000470695 RC3H1Q5TC82 1133 aaKnown RBP15.82■□□□□ 0.12
IFT88-205ENST00000470695 INTS5Q6P9B9 1019 aaKnown RBP15.82■□□□□ 0.12
IFT88-205ENST00000470695 ANKRD13DQ6ZTN6 518 aa15.82■□□□□ 0.12
IFT88-205ENST00000470695 PI4KAP1Q8N8J0 262 aa15.82■□□□□ 0.12
IFT88-205ENST00000470695 PLBD2Q8NHP8 589 aa15.82■□□□□ 0.12
IFT88-205ENST00000470695 CCNL1Q9UK58 526 aaPredicted RBP15.82■□□□□ 0.12
IFT88-205ENST00000470695 CNTNAP4Q9C0A0 1308 aa15.82■□□□□ 0.12
IFT88-205ENST00000470695 ZBTB7BO15156 539 aaPredicted RBP15.81■□□□□ 0.12
IFT88-205ENST00000470695 AIMP1Q12904 312 aaKnown RBP15.81■□□□□ 0.12
IFT88-205ENST00000470695 ZBTB1Q9Y2K1 713 aa15.81■□□□□ 0.12
IFT88-205ENST00000470695 MAP3K2Q9Y2U5 619 aa15.81■□□□□ 0.12
IFT88-205ENST00000470695 PIP4K2AP48426 406 aaPredicted RBP15.8■□□□□ 0.12
IFT88-205ENST00000470695 EIF5P55010 431 aaKnown RBP15.8■□□□□ 0.12
IFT88-205ENST00000470695 SLC4A10Q6U841 1118 aa15.8■□□□□ 0.12
IFT88-205ENST00000470695 RIC3Q7Z5B4 369 aa15.8■□□□□ 0.12
IFT88-205ENST00000470695 LINC00116Q8NCU8 138 aa15.8■□□□□ 0.12
IFT88-205ENST00000470695 ALDH1L1O75891 902 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms