RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 ZNF330Q9Y3S2 320 aaPredicted RBP5.7□□□□□ -1.5
UBXN4-206ENST00000470687 PCDHGC4Q9Y5F7 938 aa5.7□□□□□ -1.5
UBXN4-206ENST00000470687 ATP4AP20648 1035 aa5.69□□□□□ -1.5
UBXN4-206ENST00000470687 ESCO1Q5FWF5 840 aa5.69□□□□□ -1.5
UBXN4-206ENST00000470687 NKAPLQ5M9Q1 402 aa5.69□□□□□ -1.5
UBXN4-206ENST00000470687 TBC1D9Q6ZT07 1266 aa5.69□□□□□ -1.5
UBXN4-206ENST00000470687 PLVAPQ9BX97 442 aa5.69□□□□□ -1.5
UBXN4-206ENST00000470687 AVENQ9NQS1 362 aaPredicted RBP5.69□□□□□ -1.5
UBXN4-206ENST00000470687 GTF3C3Q9Y5Q9 886 aa5.69□□□□□ -1.5
UBXN4-206ENST00000470687 STAU1O95793 577 aaKnown RBP5.68□□□□□ -1.5
UBXN4-206ENST00000470687 PLA2G4AP47712 749 aa5.68□□□□□ -1.5
UBXN4-206ENST00000470687 FAM182BQ5T319 152 aa5.68□□□□□ -1.5
UBXN4-206ENST00000470687 NLRP8Q86W28 1048 aa5.68□□□□□ -1.5
UBXN4-206ENST00000470687 ETNK1Q9HBU6 452 aa5.68□□□□□ -1.5
UBXN4-206ENST00000470687 SNRKQ9NRH2 765 aa5.68□□□□□ -1.5
UBXN4-206ENST00000470687 NISCHQ9Y2I1 1504 aa5.68□□□□□ -1.5
UBXN4-206ENST00000470687 DCDC2BA2VCK2 349 aa5.67□□□□□ -1.5
UBXN4-206ENST00000470687 ATXN7O15265 892 aaPredicted RBP5.67□□□□□ -1.5
UBXN4-206ENST00000470687 CD33P20138 364 aa5.67□□□□□ -1.5
UBXN4-206ENST00000470687 TLR1Q15399 786 aa5.67□□□□□ -1.5
UBXN4-206ENST00000470687 C1orf216Q8TAB5 229 aa5.67□□□□□ -1.5
UBXN4-206ENST00000470687 TPSG1Q9NRR2 321 aa5.67□□□□□ -1.5
UBXN4-206ENST00000470687 DYRK3O43781 588 aa5.66□□□□□ -1.5
UBXN4-206ENST00000470687 MAPTP10636 758 aaKnown RBP5.66□□□□□ -1.5
UBXN4-206ENST00000470687 TNP2Q05952 138 aa5.66□□□□□ -1.5
UBXN4-206ENST00000470687 ARTNQ5T4W7 220 aa5.66□□□□□ -1.5
UBXN4-206ENST00000470687 ZFP64Q9NPA5 681 aa5.66□□□□□ -1.5
UBXN4-206ENST00000470687 CEP126Q9P2H0 1117 aa5.66□□□□□ -1.5
UBXN4-206ENST00000470687 PCBP4P57723 403 aaKnown RBP5.65□□□□□ -1.5
UBXN4-206ENST00000470687 ZNF468Q5VIY5 522 aaPredicted RBP5.65□□□□□ -1.5
UBXN4-206ENST00000470687 PCMTD1Q96MG8 357 aaPredicted RBP5.65□□□□□ -1.5
UBXN4-206ENST00000470687 MTMR14Q8NCE2 650 aa5.64□□□□□ -1.51
UBXN4-206ENST00000470687 POM121Q96HA1 1249 aa5.64□□□□□ -1.51
UBXN4-206ENST00000470687 A0A1W2PNR3 127 aa5.63□□□□□ -1.51
UBXN4-206ENST00000470687 SPDYE3A6NKU9 549 aa5.63□□□□□ -1.51
UBXN4-206ENST00000470687 KHNYNO15037 678 aaKnown RBP5.63□□□□□ -1.51
UBXN4-206ENST00000470687 PRRT3Q5FWE3 981 aa5.63□□□□□ -1.51
UBXN4-206ENST00000470687 SOCS7O14512 581 aa5.62□□□□□ -1.51
UBXN4-206ENST00000470687 FAM157BP0CG42 384 aa5.62□□□□□ -1.51
UBXN4-206ENST00000470687 SCNN1DP51172 638 aa5.62□□□□□ -1.51
UBXN4-206ENST00000470687 USP4Q13107 963 aa5.62□□□□□ -1.51
UBXN4-206ENST00000470687 MCM6Q14566 821 aa5.62□□□□□ -1.51
UBXN4-206ENST00000470687 TSGA10IPQ3SY00 556 aa5.62□□□□□ -1.51
UBXN4-206ENST00000470687 PRSS36Q5K4E3 855 aa5.62□□□□□ -1.51
UBXN4-206ENST00000470687 AIDAQ96BJ3 306 aa5.62□□□□□ -1.51
UBXN4-206ENST00000470687 MDFIQ99750 246 aa5.62□□□□□ -1.51
UBXN4-206ENST00000470687 NIFKQ9BYG3 293 aaKnown RBP5.62□□□□□ -1.51
UBXN4-206ENST00000470687 PRR12Q9ULL5 1215 aa5.62□□□□□ -1.51
UBXN4-206ENST00000470687 DOLKQ9UPQ8 538 aa5.62□□□□□ -1.51
UBXN4-206ENST00000470687 NDUFB9Q9Y6M9 179 aa5.62□□□□□ -1.51
UBXN4-206ENST00000470687 ELOA3CA0A087WX78 387 aaPredicted RBP5.61□□□□□ -1.51
UBXN4-206ENST00000470687 ELOA3DA6NLF2 546 aaPredicted RBP5.61□□□□□ -1.51
UBXN4-206ENST00000470687 APBA3O96018 575 aa5.61□□□□□ -1.51
UBXN4-206ENST00000470687 INHAP05111 366 aa5.61□□□□□ -1.51
UBXN4-206ENST00000470687 ELOA3BQ3SY89 546 aa5.61□□□□□ -1.51
UBXN4-206ENST00000470687 ARSJQ5FYB0 599 aaPredicted RBP5.61□□□□□ -1.51
UBXN4-206ENST00000470687 NBPF11Q86T75 865 aa5.61□□□□□ -1.51
UBXN4-206ENST00000470687 ZNF295-AS1Q8N0V1 137 aa5.61□□□□□ -1.51
UBXN4-206ENST00000470687 ELOA3Q8NG57 546 aa5.61□□□□□ -1.51
UBXN4-206ENST00000470687 KRTAP9-9Q9BYP9 154 aa5.61□□□□□ -1.51
UBXN4-206ENST00000470687 KRTAP9-4Q9BYQ2 154 aa5.61□□□□□ -1.51
UBXN4-206ENST00000470687 STRN4Q9NRL3 753 aa5.61□□□□□ -1.51
UBXN4-206ENST00000470687 FAM229AH3BQW9 127 aa5.6□□□□□ -1.51
UBXN4-206ENST00000470687 EFSO43281 561 aa5.6□□□□□ -1.51
UBXN4-206ENST00000470687 GDF10P55107 478 aa5.6□□□□□ -1.51
UBXN4-206ENST00000470687 NBPF1Q3BBV0 1214 aa5.6□□□□□ -1.51
UBXN4-206ENST00000470687 SAMD5Q5TGI4 173 aa5.6□□□□□ -1.51
UBXN4-206ENST00000470687 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
UBXN4-206ENST00000470687 PHTF2Q8N3S3 785 aa5.6□□□□□ -1.51
UBXN4-206ENST00000470687 C1orf115Q9H7X2 142 aa5.6□□□□□ -1.51
UBXN4-206ENST00000470687 ALAS2P22557 587 aa5.59□□□□□ -1.51
UBXN4-206ENST00000470687 SMTNP53814 917 aa5.59□□□□□ -1.51
UBXN4-206ENST00000470687 COL9A3Q14050 684 aaPredicted RBP5.59□□□□□ -1.51
UBXN4-206ENST00000470687 OXLD1Q5BKU9 147 aa5.59□□□□□ -1.51
UBXN4-206ENST00000470687 FNBP4Q8N3X1 1017 aaPredicted RBP5.59□□□□□ -1.51
UBXN4-206ENST00000470687 ZIC5Q96T25 663 aa5.59□□□□□ -1.51
UBXN4-206ENST00000470687 ZDHHC3Q9NYG2 299 aa5.59□□□□□ -1.51
UBXN4-206ENST00000470687 MARK1Q9P0L2 795 aa5.59□□□□□ -1.51
UBXN4-206ENST00000470687 BTBD11A6QL63 1104 aa5.58□□□□□ -1.52
UBXN4-206ENST00000470687 TATP17735 454 aaPredicted RBP5.58□□□□□ -1.52
UBXN4-206ENST00000470687 IRF5Q13568 498 aa5.58□□□□□ -1.52
UBXN4-206ENST00000470687 LAMC2Q13753 1193 aa5.58□□□□□ -1.52
UBXN4-206ENST00000470687 LRP8Q14114 963 aa5.58□□□□□ -1.52
UBXN4-206ENST00000470687 SYT9Q86SS6 491 aa5.58□□□□□ -1.52
UBXN4-206ENST00000470687 BANK1Q8NDB2 785 aa5.58□□□□□ -1.52
UBXN4-206ENST00000470687 CLUAP1Q96AJ1 413 aa5.58□□□□□ -1.52
UBXN4-206ENST00000470687 NACC1Q96RE7 527 aa5.58□□□□□ -1.52
UBXN4-206ENST00000470687 PRDM6Q9NQX0 595 aa5.58□□□□□ -1.52
UBXN4-206ENST00000470687 CHIC2Q9UKJ5 165 aa5.58□□□□□ -1.52
UBXN4-206ENST00000470687 ADARB2-AS1A8MUL3 147 aa5.57□□□□□ -1.52
UBXN4-206ENST00000470687 M0R082 166 aa5.57□□□□□ -1.52
UBXN4-206ENST00000470687 SLFNL1Q499Z3 407 aa5.57□□□□□ -1.52
UBXN4-206ENST00000470687 ZNF417Q8TAU3 575 aa5.57□□□□□ -1.52
UBXN4-206ENST00000470687 SIRT1Q96EB6 747 aa5.57□□□□□ -1.52
UBXN4-206ENST00000470687 ZNF587Q96SQ5 575 aaPredicted RBP5.57□□□□□ -1.52
UBXN4-206ENST00000470687 IQSEC3Q9UPP2 1182 aaPredicted RBP5.57□□□□□ -1.52
UBXN4-206ENST00000470687 GJA3Q9Y6H8 435 aa5.57□□□□□ -1.52
UBXN4-206ENST00000470687 SIN3BO75182 1162 aa5.56□□□□□ -1.52
UBXN4-206ENST00000470687 H2AFB1P0C5Y9 115 aa5.56□□□□□ -1.52
UBXN4-206ENST00000470687 H2AFB2P0C5Z0 115 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms