RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 NOL10Q9BSC4 688 aaKnown RBP11.34□□□□□ -0.59
NHLRC3-203ENST00000470258 TERF2IPQ9NYB0 399 aa11.34□□□□□ -0.59
NHLRC3-203ENST00000470258 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.34□□□□□ -0.59
NHLRC3-203ENST00000470258 SYCP1Q15431 976 aa11.34□□□□□ -0.59
NHLRC3-203ENST00000470258 DDX54Q8TDD1 881 aaKnown RBP11.34□□□□□ -0.59
NHLRC3-203ENST00000470258 CACTINQ8WUQ7 758 aaKnown RBP11.34□□□□□ -0.59
NHLRC3-203ENST00000470258 C14orf93Q9H972 538 aaKnown RBP11.34□□□□□ -0.59
NHLRC3-203ENST00000470258 ANAPC15P60006 121 aa11.34□□□□□ -0.59
NHLRC3-203ENST00000470258 PTPN14Q15678 1187 aa11.34□□□□□ -0.59
NHLRC3-203ENST00000470258 TAF7LQ5H9L4 462 aa11.34□□□□□ -0.59
NHLRC3-203ENST00000470258 TNMDQ9H2S6 317 aa11.34□□□□□ -0.59
NHLRC3-203ENST00000470258 CBX8Q9HC52 389 aa11.34□□□□□ -0.59
NHLRC3-203ENST00000470258 MROH1Q8NDA8 1641 aa11.34□□□□□ -0.59
NHLRC3-203ENST00000470258 ATP10DQ9P241 1426 aa11.33□□□□□ -0.59
NHLRC3-203ENST00000470258 USP27XA6NNY8 438 aa11.33□□□□□ -0.6
NHLRC3-203ENST00000470258 F6X3S4 739 aa11.33□□□□□ -0.6
NHLRC3-203ENST00000470258 AK2P54819 239 aa11.33□□□□□ -0.6
NHLRC3-203ENST00000470258 ARID5BQ14865 1188 aa11.33□□□□□ -0.6
NHLRC3-203ENST00000470258 AEBP2Q6ZN18 517 aaPredicted RBP11.33□□□□□ -0.6
NHLRC3-203ENST00000470258 UNC5CLQ8IV45 518 aa11.33□□□□□ -0.6
NHLRC3-203ENST00000470258 RIMS1Q86UR5 1692 aaKnown RBP11.33□□□□□ -0.6
NHLRC3-203ENST00000470258 RTL1A6NKG5 1358 aa11.33□□□□□ -0.6
NHLRC3-203ENST00000470258 GJB2P29033 226 aa11.33□□□□□ -0.6
NHLRC3-203ENST00000470258 MRVI1Q9Y6F6 885 aa11.33□□□□□ -0.6
NHLRC3-203ENST00000470258 POLR3GO15318 223 aaPredicted RBP11.33□□□□□ -0.6
NHLRC3-203ENST00000470258 LIG1P18858 919 aa11.33□□□□□ -0.6
NHLRC3-203ENST00000470258 ZNF75DP51815 510 aa11.33□□□□□ -0.6
NHLRC3-203ENST00000470258 HNRNPH2P55795 449 aaKnown RBP11.33□□□□□ -0.6
NHLRC3-203ENST00000470258 FILIP1Q7Z7B0 1213 aa11.33□□□□□ -0.6
NHLRC3-203ENST00000470258 SYTL4Q96C24 671 aaPredicted RBP11.33□□□□□ -0.6
NHLRC3-203ENST00000470258 IL25Q9H293 177 aa11.33□□□□□ -0.6
NHLRC3-203ENST00000470258 RBM6P78332 1123 aaKnown RBP11.32□□□□□ -0.6
NHLRC3-203ENST00000470258 MYOM2P54296 1465 aa11.32□□□□□ -0.6
NHLRC3-203ENST00000470258 ZC3H13Q5T200 1668 aaKnown RBP11.32□□□□□ -0.6
NHLRC3-203ENST00000470258 KIAA1210Q9ULL0 1709 aa11.32□□□□□ -0.6
NHLRC3-203ENST00000470258 CCDC144BQ3MJ40 725 aa11.32□□□□□ -0.6
NHLRC3-203ENST00000470258 KNDC1Q76NI1 1749 aa11.32□□□□□ -0.6
NHLRC3-203ENST00000470258 CCDC144CPQ8IYA2 1237 aa11.32□□□□□ -0.6
NHLRC3-203ENST00000470258 LRRCC1Q9C099 1032 aa11.32□□□□□ -0.6
NHLRC3-203ENST00000470258 QRICH2Q9H0J4 1663 aa11.32□□□□□ -0.6
NHLRC3-203ENST00000470258 IL1RAPL2Q9NP60 686 aa11.32□□□□□ -0.6
NHLRC3-203ENST00000470258 DACT1Q9NYF0 836 aa11.32□□□□□ -0.6
NHLRC3-203ENST00000470258 DNAJC25Q9H1X3 360 aa11.31□□□□□ -0.6
NHLRC3-203ENST00000470258 HDGFL2Q7Z4V5 671 aaPredicted RBP11.31□□□□□ -0.6
NHLRC3-203ENST00000470258 TFIP11Q9UBB9 837 aaKnown RBP11.31□□□□□ -0.6
NHLRC3-203ENST00000470258 LIMCH1Q9UPQ0 1083 aa11.31□□□□□ -0.6
NHLRC3-203ENST00000470258 LRRC7Q96NW7 1537 aa11.31□□□□□ -0.6
NHLRC3-203ENST00000470258 LARGE1O95461 756 aa11.31□□□□□ -0.6
NHLRC3-203ENST00000470258 SLC4A2P04920 1241 aa11.31□□□□□ -0.6
NHLRC3-203ENST00000470258 ZNF165P49910 485 aa11.31□□□□□ -0.6
NHLRC3-203ENST00000470258 GORABQ5T7V8 394 aa11.31□□□□□ -0.6
NHLRC3-203ENST00000470258 NEK11Q8NG66 645 aa11.31□□□□□ -0.6
NHLRC3-203ENST00000470258 EMILIN1Q9Y6C2 1016 aa11.31□□□□□ -0.6
NHLRC3-203ENST00000470258 COL3A1P02461 1466 aaPredicted RBP11.3□□□□□ -0.6
NHLRC3-203ENST00000470258 CASTP20810 708 aaKnown RBP11.3□□□□□ -0.6
NHLRC3-203ENST00000470258 IRX3P78415 501 aaPredicted RBP11.3□□□□□ -0.6
NHLRC3-203ENST00000470258 RUFY3Q7L099 469 aa11.3□□□□□ -0.6
NHLRC3-203ENST00000470258 FBXW7Q969H0 707 aa11.3□□□□□ -0.6
NHLRC3-203ENST00000470258 TMX1Q9H3N1 280 aa11.3□□□□□ -0.6
NHLRC3-203ENST00000470258 GOLGA6L19H0YKK7 550 aa11.3□□□□□ -0.6
NHLRC3-203ENST00000470258 SKILP12757 684 aa11.3□□□□□ -0.6
NHLRC3-203ENST00000470258 NUTM1Q86Y26 1132 aa11.3□□□□□ -0.6
NHLRC3-203ENST00000470258 NECAB1Q8N987 351 aa11.3□□□□□ -0.6
NHLRC3-203ENST00000470258 CLTCQ00610 1675 aaKnown RBP11.3□□□□□ -0.6
NHLRC3-203ENST00000470258 RAD50Q92878 1312 aa11.29□□□□□ -0.6
NHLRC3-203ENST00000470258 ERCC6LQ2NKX8 1250 aa11.29□□□□□ -0.6
NHLRC3-203ENST00000470258 TTC6Q86TZ1 520 aa11.29□□□□□ -0.6
NHLRC3-203ENST00000470258 BICD2Q8TD16 824 aa11.29□□□□□ -0.6
NHLRC3-203ENST00000470258 SPG7Q9UQ90 795 aa11.29□□□□□ -0.6
NHLRC3-203ENST00000470258 C3P01024 1663 aa11.29□□□□□ -0.6
NHLRC3-203ENST00000470258 ZNF853P0CG23 659 aa11.29□□□□□ -0.6
NHLRC3-203ENST00000470258 OSBPL3Q9H4L5 887 aa11.29□□□□□ -0.6
NHLRC3-203ENST00000470258 POLKQ9UBT6 870 aa11.29□□□□□ -0.6
NHLRC3-203ENST00000470258 MTMR6Q9Y217 621 aa11.29□□□□□ -0.6
NHLRC3-203ENST00000470258 SLU7O95391 586 aaKnown RBP11.29□□□□□ -0.6
NHLRC3-203ENST00000470258 KRT85P78386 507 aa11.29□□□□□ -0.6
NHLRC3-203ENST00000470258 RAD51AP2Q09MP3 1159 aa11.29□□□□□ -0.6
NHLRC3-203ENST00000470258 LMOD3Q0VAK6 560 aa11.29□□□□□ -0.6
NHLRC3-203ENST00000470258 RASEFQ8IZ41 740 aa11.29□□□□□ -0.6
NHLRC3-203ENST00000470258 ERO1AQ96HE7 468 aa11.29□□□□□ -0.6
NHLRC3-203ENST00000470258 SNX14Q9Y5W7 946 aa11.29□□□□□ -0.6
NHLRC3-203ENST00000470258 HTATSF1O43719 755 aaKnown RBP11.28□□□□□ -0.6
NHLRC3-203ENST00000470258 HSPA4P34932 840 aa11.28□□□□□ -0.6
NHLRC3-203ENST00000470258 BMS1Q14692 1282 aaKnown RBP11.28□□□□□ -0.6
NHLRC3-203ENST00000470258 ZNF446Q9NWS9 450 aa11.28□□□□□ -0.6
NHLRC3-203ENST00000470258 MIS18AQ9NYP9 233 aa11.28□□□□□ -0.6
NHLRC3-203ENST00000470258 CABP1Q9NZU7 370 aa11.28□□□□□ -0.6
NHLRC3-203ENST00000470258 USP16Q9Y5T5 823 aa11.28□□□□□ -0.6
NHLRC3-203ENST00000470258 FAM135BQ49AJ0 1406 aa11.28□□□□□ -0.6
NHLRC3-203ENST00000470258 KDM4FA0A1W2PPD8 638 aa11.28□□□□□ -0.6
NHLRC3-203ENST00000470258 LARP1BQ659C4 914 aaKnown RBP11.28□□□□□ -0.6
NHLRC3-203ENST00000470258 FEZ2Q9UHY8 353 aaPredicted RBP11.28□□□□□ -0.6
NHLRC3-203ENST00000470258 GGT6Q6P531 493 aa11.27□□□□□ -0.6
NHLRC3-203ENST00000470258 CWC27Q6UX04 472 aaKnown RBP11.27□□□□□ -0.6
NHLRC3-203ENST00000470258 MCM10Q7L590 875 aa11.27□□□□□ -0.6
NHLRC3-203ENST00000470258 CFAP65Q6ZU64 1925 aaKnown RBP11.27□□□□□ -0.6
NHLRC3-203ENST00000470258 VWDEQ8N2E2 1590 aa11.27□□□□□ -0.6
NHLRC3-203ENST00000470258 CCDC171Q6TFL3 1326 aa11.27□□□□□ -0.6
NHLRC3-203ENST00000470258 GNAI2P04899 355 aa11.27□□□□□ -0.61
NHLRC3-203ENST00000470258 TULP2O00295 520 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms