RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 BCS1LQ9Y276 419 aa18.14■□□□□ 0.49
EFNA1-203ENST00000469878 CEMIPQ8WUJ3 1361 aa18.14■□□□□ 0.49
EFNA1-203ENST00000469878 POLRMTO00411 1230 aaKnown RBP18.13■□□□□ 0.49
EFNA1-203ENST00000469878 KCNQ3O43525 872 aa18.13■□□□□ 0.49
EFNA1-203ENST00000469878 KCNA3P22001 575 aa18.13■□□□□ 0.49
EFNA1-203ENST00000469878 CANXP27824 592 aaKnown RBP18.13■□□□□ 0.49
EFNA1-203ENST00000469878 TEFQ10587 303 aa18.13■□□□□ 0.49
EFNA1-203ENST00000469878 BCL2L12Q9HB09 334 aa18.13■□□□□ 0.49
EFNA1-203ENST00000469878 SCN7AQ01118 1682 aa18.12■□□□□ 0.49
EFNA1-203ENST00000469878 NRXN2Q9P2S2 1712 aa18.12■□□□□ 0.49
EFNA1-203ENST00000469878 ARFGEF1Q9Y6D6 1849 aa18.12■□□□□ 0.49
EFNA1-203ENST00000469878 TM4SF1P30408 202 aa18.12■□□□□ 0.49
EFNA1-203ENST00000469878 ZNF790Q6PG37 636 aa18.12■□□□□ 0.49
EFNA1-203ENST00000469878 TTC5Q8N0Z6 440 aa18.12■□□□□ 0.49
EFNA1-203ENST00000469878 VSIG10Q8N0Z9 540 aa18.12■□□□□ 0.49
EFNA1-203ENST00000469878 HEG1Q9ULI3 1381 aa18.12■□□□□ 0.49
EFNA1-203ENST00000469878 SENP3-EIF4A1A0A087X0R7 540 aa18.11■□□□□ 0.49
EFNA1-203ENST00000469878 ZPR1O75312 459 aa18.11■□□□□ 0.49
EFNA1-203ENST00000469878 U2AF1L5P0DN76 240 aaPredicted RBP18.11■□□□□ 0.49
EFNA1-203ENST00000469878 CHRNA5P30532 468 aa18.11■□□□□ 0.49
EFNA1-203ENST00000469878 U2AF1Q01081 240 aaKnown RBP eCLIP18.11■□□□□ 0.492e-7■□□□□ 10
EFNA1-203ENST00000469878 NARFQ9UHQ1 456 aa18.11■□□□□ 0.49
EFNA1-203ENST00000469878 NFIXQ14938 502 aa18.1■□□□□ 0.49
EFNA1-203ENST00000469878 FCHSD2O94868 740 aa18.09■□□□□ 0.49
EFNA1-203ENST00000469878 MCM10Q7L590 875 aa18.09■□□□□ 0.49
EFNA1-203ENST00000469878 CARMIL3Q8ND23 1372 aa18.08■□□□□ 0.49
EFNA1-203ENST00000469878 DLG5Q8TDM6 1919 aa18.08■□□□□ 0.49
EFNA1-203ENST00000469878 DCTN1Q14203 1278 aa18.08■□□□□ 0.48
EFNA1-203ENST00000469878 NUDCQ9Y266 331 aa18.08■□□□□ 0.48
EFNA1-203ENST00000469878 DLEC1Q9Y238 1755 aa18.08■□□□□ 0.48
EFNA1-203ENST00000469878 PRAMEF22A3QJZ6 481 aa18.07■□□□□ 0.48
EFNA1-203ENST00000469878 EIF5P55010 431 aaKnown RBP18.07■□□□□ 0.48
EFNA1-203ENST00000469878 GPBP1L1Q9HC44 474 aaPredicted RBP18.07■□□□□ 0.48
EFNA1-203ENST00000469878 ZNF330Q9Y3S2 320 aaPredicted RBP18.07■□□□□ 0.48
EFNA1-203ENST00000469878 ANKRD31Q8N7Z5 1873 aa18.07■□□□□ 0.48
EFNA1-203ENST00000469878 BCORQ6W2J9 1755 aa18.07■□□□□ 0.48
EFNA1-203ENST00000469878 BTBD11A6QL63 1104 aa18.06■□□□□ 0.48
EFNA1-203ENST00000469878 PIP4K2AP48426 406 aaPredicted RBP18.06■□□□□ 0.48
EFNA1-203ENST00000469878 BICDL1Q6ZP65 573 aa18.06■□□□□ 0.48
EFNA1-203ENST00000469878 ARHGAP27Q6ZUM4 889 aa18.06■□□□□ 0.48
EFNA1-203ENST00000469878 STARD3NLO95772 234 aa18.05■□□□□ 0.48
EFNA1-203ENST00000469878 A1BGP04217 495 aa18.05■□□□□ 0.48
EFNA1-203ENST00000469878 FMNL2Q96PY5 1086 aa18.05■□□□□ 0.48
EFNA1-203ENST00000469878 PIM2Q9P1W9 311 aa18.05■□□□□ 0.48
EFNA1-203ENST00000469878 COL11A2P13942 1736 aaPredicted RBP18.04■□□□□ 0.48
EFNA1-203ENST00000469878 SERPINB2P05120 415 aa18.04■□□□□ 0.48
EFNA1-203ENST00000469878 TBC1D2BQ9UPU7 963 aa18.04■□□□□ 0.48
EFNA1-203ENST00000469878 DALRD3Q5D0E6 543 aaKnown RBP18.03■□□□□ 0.48
EFNA1-203ENST00000469878 TBC1D9BQ66K14 1250 aa18.03■□□□□ 0.48
EFNA1-203ENST00000469878 USP16Q9Y5T5 823 aa18.03■□□□□ 0.48
EFNA1-203ENST00000469878 SBF1O95248 1867 aa18.02■□□□□ 0.48
EFNA1-203ENST00000469878 CCDC24Q8N4L8 307 aa18.02■□□□□ 0.48
EFNA1-203ENST00000469878 KDM3BQ7LBC6 1761 aa18.02■□□□□ 0.47
EFNA1-203ENST00000469878 RTF1Q92541 710 aaKnown RBP18.01■□□□□ 0.47
EFNA1-203ENST00000469878 LAMB4A4D0S4 1761 aa18.01■□□□□ 0.47
EFNA1-203ENST00000469878 KIF3CO14782 793 aa18■□□□□ 0.47
EFNA1-203ENST00000469878 IL6STP40189 918 aaPredicted RBP18■□□□□ 0.47
EFNA1-203ENST00000469878 TEX13AQ9BXU3 409 aaPredicted RBP18■□□□□ 0.47
EFNA1-203ENST00000469878 MIS18AQ9NYP9 233 aa18■□□□□ 0.47
EFNA1-203ENST00000469878 A0A087WZG4 1122 aa17.99■□□□□ 0.47
EFNA1-203ENST00000469878 CAMTA2O94983 1202 aa17.99■□□□□ 0.47
EFNA1-203ENST00000469878 C9orf131Q5VYM1 1079 aa17.99■□□□□ 0.47
EFNA1-203ENST00000469878 PLEKHF1Q96S99 279 aa17.99■□□□□ 0.47
EFNA1-203ENST00000469878 RASSF7Q02833 373 aa17.98■□□□□ 0.47
EFNA1-203ENST00000469878 THUMPD2Q9BTF0 503 aaKnown RBP17.98■□□□□ 0.47
EFNA1-203ENST00000469878 CACNA1SQ13698 1873 aa17.97■□□□□ 0.47
EFNA1-203ENST00000469878 NBPF26B4DH59 902 aa17.97■□□□□ 0.47
EFNA1-203ENST00000469878 PRR5LQ6MZQ0 368 aa17.97■□□□□ 0.47
EFNA1-203ENST00000469878 NBPF10Q6P3W6 841 aaKnown RBP17.97■□□□□ 0.47
EFNA1-203ENST00000469878 C2CD5Q86YS7 1000 aa17.97■□□□□ 0.47
EFNA1-203ENST00000469878 NBPF15Q8N660 670 aa17.97■□□□□ 0.47
EFNA1-203ENST00000469878 NMRK2Q9NPI5 230 aa17.97■□□□□ 0.47
EFNA1-203ENST00000469878 PRELPP51888 382 aa17.96■□□□□ 0.47
EFNA1-203ENST00000469878 DZIP3Q86Y13 1208 aaKnown RBP17.96■□□□□ 0.47
EFNA1-203ENST00000469878 HTATSF1O43719 755 aaKnown RBP17.95■□□□□ 0.46
EFNA1-203ENST00000469878 SNRPA1P09661 255 aaKnown RBP17.95■□□□□ 0.46
EFNA1-203ENST00000469878 RNF181Q9P0P0 153 aa17.95■□□□□ 0.46
EFNA1-203ENST00000469878 TIAM2Q8IVF5 1701 aa17.95■□□□□ 0.46
EFNA1-203ENST00000469878 CCDC88AQ3V6T2 1871 aa17.95■□□□□ 0.46
EFNA1-203ENST00000469878 TAF7Q15545 349 aaPredicted RBP17.94■□□□□ 0.46
EFNA1-203ENST00000469878 NFE2L2Q16236 605 aa17.93■□□□□ 0.46
EFNA1-203ENST00000469878 H0YIN7 160 aa17.92■□□□□ 0.46
EFNA1-203ENST00000469878 DDX10Q13206 875 aaKnown RBP17.92■□□□□ 0.46
EFNA1-203ENST00000469878 TTLL6Q8N841 843 aa17.92■□□□□ 0.46
EFNA1-203ENST00000469878 ZNF219Q9P2Y4 722 aaPredicted RBP17.92■□□□□ 0.46
EFNA1-203ENST00000469878 SLX4Q8IY92 1834 aa17.91■□□□□ 0.46
EFNA1-203ENST00000469878 CNBD1Q8NA66 436 aa17.91■□□□□ 0.46
EFNA1-203ENST00000469878 SETDB2Q96T68 719 aa17.91■□□□□ 0.46
EFNA1-203ENST00000469878 ARFGEF2Q9Y6D5 1785 aa17.9■□□□□ 0.46
EFNA1-203ENST00000469878 NFKBIEO00221 500 aa17.9■□□□□ 0.46
EFNA1-203ENST00000469878 HSPA6P17066 643 aa17.9■□□□□ 0.46
EFNA1-203ENST00000469878 NPM2Q86SE8 214 aaKnown RBP17.9■□□□□ 0.46
EFNA1-203ENST00000469878 ZNF622Q969S3 477 aaKnown RBP eCLIP17.9■□□□□ 0.46
EFNA1-203ENST00000469878 BRIP1Q9BX63 1249 aa17.9■□□□□ 0.46
EFNA1-203ENST00000469878 FER1L6Q2WGJ9 1857 aa17.9■□□□□ 0.46
EFNA1-203ENST00000469878 TNRC6CQ9HCJ0 1690 aaKnown RBP17.9■□□□□ 0.46
EFNA1-203ENST00000469878 NEFMP07197 916 aa17.89■□□□□ 0.45
EFNA1-203ENST00000469878 MAPK8IP3Q9UPT6 1336 aa17.89■□□□□ 0.45
EFNA1-203ENST00000469878 PDE6BP35913 854 aa17.88■□□□□ 0.45
EFNA1-203ENST00000469878 EIF4A1P60842 406 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms